RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 LAMB1P07942 1786 aa10.44□□□□□ -0.74
GAPVD1-204ENST00000394083 TIAM2Q8IVF5 1701 aa10.44□□□□□ -0.74
GAPVD1-204ENST00000394083 MCM4P33991 863 aa10.44□□□□□ -0.74
GAPVD1-204ENST00000394083 EYSQ5T1H1 3165 aa10.44□□□□□ -0.74
GAPVD1-204ENST00000394083 ALDH1L1O75891 902 aa10.44□□□□□ -0.74
GAPVD1-204ENST00000394083 SNRPA1P09661 255 aaKnown RBP10.44□□□□□ -0.74
GAPVD1-204ENST00000394083 HYPKQ9NX55 129 aa10.44□□□□□ -0.74
GAPVD1-204ENST00000394083 LRRC37AA6NMS7 1700 aa10.44□□□□□ -0.74
GAPVD1-204ENST00000394083 SIPA1L1O43166 1804 aa10.44□□□□□ -0.74
GAPVD1-204ENST00000394083 IRS2Q9Y4H2 1338 aa10.43□□□□□ -0.74
GAPVD1-204ENST00000394083 ERVV-2B6SEH9 535 aa10.43□□□□□ -0.74
GAPVD1-204ENST00000394083 GNAI3P08754 354 aa10.43□□□□□ -0.74
GAPVD1-204ENST00000394083 C1orf141Q5JVX7 400 aa10.43□□□□□ -0.74
GAPVD1-204ENST00000394083 ZBTB3Q9H5J0 574 aa10.43□□□□□ -0.74
GAPVD1-204ENST00000394083 BPTFQ12830 3046 aa10.43□□□□□ -0.74
GAPVD1-204ENST00000394083 TATP17735 454 aaPredicted RBP10.43□□□□□ -0.74
GAPVD1-204ENST00000394083 TIMM10P62072 90 aa10.43□□□□□ -0.74
GAPVD1-204ENST00000394083 TOB2Q14106 344 aaPredicted RBP10.43□□□□□ -0.74
GAPVD1-204ENST00000394083 TOM1L2Q6ZVM7 507 aa10.43□□□□□ -0.74
GAPVD1-204ENST00000394083 MYH6P13533 1939 aa10.43□□□□□ -0.74
GAPVD1-204ENST00000394083 AOX1Q06278 1338 aa10.42□□□□□ -0.74
GAPVD1-204ENST00000394083 K7ELQ4 463 aaPredicted RBP10.42□□□□□ -0.74
GAPVD1-204ENST00000394083 CSF1RP07333 972 aa10.42□□□□□ -0.74
GAPVD1-204ENST00000394083 RAPGEF4Q8WZA2 1011 aa10.42□□□□□ -0.74
GAPVD1-204ENST00000394083 TMX3Q96JJ7 454 aa10.42□□□□□ -0.74
GAPVD1-204ENST00000394083 PLBD2Q8NHP8 589 aa10.42□□□□□ -0.74
GAPVD1-204ENST00000394083 TCEANC2Q96MN5 208 aa10.42□□□□□ -0.74
GAPVD1-204ENST00000394083 LMBRD1Q9NUN5 540 aa10.42□□□□□ -0.74
GAPVD1-204ENST00000394083 SCN9AQ15858 1988 aa10.42□□□□□ -0.74
GAPVD1-204ENST00000394083 SPATA31A5Q5VU36 1347 aa10.41□□□□□ -0.74
GAPVD1-204ENST00000394083 SPATA31A7Q8IWB4 1347 aa10.41□□□□□ -0.74
GAPVD1-204ENST00000394083 SHISA4Q96DD7 197 aa10.41□□□□□ -0.74
GAPVD1-204ENST00000394083 FAM89AQ96GI7 184 aa10.41□□□□□ -0.74
GAPVD1-204ENST00000394083 DUOX1Q9NRD9 1551 aa10.41□□□□□ -0.74
GAPVD1-204ENST00000394083 USPL1Q5W0Q7 1092 aa10.41□□□□□ -0.74
GAPVD1-204ENST00000394083 NEDD4P46934 1319 aa10.4□□□□□ -0.74
GAPVD1-204ENST00000394083 XRCC6P12956 609 aaKnown RBP eCLIP10.4□□□□□ -0.74
GAPVD1-204ENST00000394083 LMBR1LQ6UX01 489 aa10.4□□□□□ -0.74
GAPVD1-204ENST00000394083 GPHNQ9NQX3 736 aaPredicted RBP10.4□□□□□ -0.74
GAPVD1-204ENST00000394083 TNNI3KQ59H18 835 aa10.4□□□□□ -0.74
GAPVD1-204ENST00000394083 CWC27Q6UX04 472 aaKnown RBP10.4□□□□□ -0.74
GAPVD1-204ENST00000394083 MAP4K1Q92918 833 aa10.4□□□□□ -0.74
GAPVD1-204ENST00000394083 FMNL2Q96PY5 1086 aa10.4□□□□□ -0.74
GAPVD1-204ENST00000394083 FPGT-TNNI3KV9GXZ4 949 aa10.4□□□□□ -0.74
GAPVD1-204ENST00000394083 NMIQ13287 307 aaPredicted RBP10.39□□□□□ -0.75
GAPVD1-204ENST00000394083 RIPOR2Q9Y4F9 1068 aa10.39□□□□□ -0.75
GAPVD1-204ENST00000394083 UBE2Q2LH0YL09 131 aa10.39□□□□□ -0.75
GAPVD1-204ENST00000394083 CTDNEP1O95476 244 aa10.39□□□□□ -0.75
GAPVD1-204ENST00000394083 PRIM1P49642 420 aaKnown RBP10.39□□□□□ -0.75
GAPVD1-204ENST00000394083 TPCN1Q9ULQ1 816 aa10.39□□□□□ -0.75
GAPVD1-204ENST00000394083 SMCHD1A6NHR9 2005 aa10.39□□□□□ -0.75
GAPVD1-204ENST00000394083 ERC2O15083 957 aa10.39□□□□□ -0.75
GAPVD1-204ENST00000394083 TAF5LO75529 589 aa10.39□□□□□ -0.75
GAPVD1-204ENST00000394083 REV3LO60673 3130 aa10.39□□□□□ -0.75
GAPVD1-204ENST00000394083 KIF1BPQ96EK5 621 aa10.39□□□□□ -0.75
GAPVD1-204ENST00000394083 DDRGK1Q96HY6 314 aa10.39□□□□□ -0.75
GAPVD1-204ENST00000394083 GSE1Q14687 1217 aa10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 GREM2Q9H772 168 aa10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 ABCC12Q96J65 1359 aa10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 A0A087WZG4 1122 aa10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 GADD45BO75293 160 aaPredicted RBP10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 EIF5P55010 431 aaKnown RBP10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 CABP4P57796 275 aa10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 ILDR1Q86SU0 546 aaPredicted RBP10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 NLRP10Q86W26 655 aa10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 LINC00116Q8NCU8 138 aa10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 AK2P54819 239 aa10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 ME3Q16798 604 aa10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 BOLA2Q9H3K6 86 aa10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 TTLL11Q8NHH1 800 aa10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 CCDC85AQ96PX6 553 aaPredicted RBP10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 SENP2Q9HC62 589 aa10.38□□□□□ -0.75
GAPVD1-204ENST00000394083 ADGRA1Q86SQ6 560 aa10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 RILPL2Q969X0 211 aa10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 BAG4O95429 457 aaKnown RBP10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 CYP21A2P08686 494 aa10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 ZNF34Q8IZ26 560 aa10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 INCENPQ9NQS7 918 aa10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 XIRP2A4UGR9 3374 aa10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 M0R2C6 588 aa10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 AP5Z1O43299 807 aa10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 CCDC88AQ3V6T2 1871 aa10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 LRRC4BQ9NT99 713 aa10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 TMEM63CQ9P1W3 806 aa10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 BAZ2BQ9UIF8 2168 aaKnown RBP10.37□□□□□ -0.75
GAPVD1-204ENST00000394083 CAMTA2O94983 1202 aa10.36□□□□□ -0.75
GAPVD1-204ENST00000394083 BRD1O95696 1058 aa10.36□□□□□ -0.75
GAPVD1-204ENST00000394083 KLRK1P26718 216 aa10.36□□□□□ -0.75
GAPVD1-204ENST00000394083 AACSQ86V21 672 aa10.36□□□□□ -0.75
GAPVD1-204ENST00000394083 TCRBV5S4A2TA0A5A2 114 aa10.36□□□□□ -0.75
GAPVD1-204ENST00000394083 HSP90AB3PQ58FF7 597 aa10.36□□□□□ -0.75
GAPVD1-204ENST00000394083 TTC41PQ6P2S7 1318 aa10.36□□□□□ -0.75
GAPVD1-204ENST00000394083 OSBP2Q969R2 916 aa10.36□□□□□ -0.75
GAPVD1-204ENST00000394083 FGFR2P21802 821 aa10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 MCAMP43121 646 aa10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 TRIM28Q13263 835 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 SUSD4Q5VX71 490 aa10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 TTLL5Q6EMB2 1281 aa10.35□□□□□ -0.75
GAPVD1-204ENST00000394083 ACSBG1Q96GR2 724 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms