RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 ABCA3Q99758 1704 aa17.62■□□□□ 0.41
CDH16-202ENST00000394055 DDX46Q7L014 1031 aaKnown RBP17.62■□□□□ 0.41
CDH16-202ENST00000394055 ASAP1Q9ULH1 1129 aa17.62■□□□□ 0.41
CDH16-202ENST00000394055 TPRNQ4KMQ1 711 aa17.62■□□□□ 0.41
CDH16-202ENST00000394055 BTG4Q9NY30 223 aa17.62■□□□□ 0.41
CDH16-202ENST00000394055 WDR33Q9C0J8 1336 aaKnown RBP17.62■□□□□ 0.41
CDH16-202ENST00000394055 VPS53Q5VIR6 699 aa17.61■□□□□ 0.41
CDH16-202ENST00000394055 TMEM63CQ9P1W3 806 aa17.61■□□□□ 0.41
CDH16-202ENST00000394055 SMC3Q9UQE7 1217 aa17.61■□□□□ 0.41
CDH16-202ENST00000394055 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
CDH16-202ENST00000394055 SHANK3Q9BYB0 1731 aa17.61■□□□□ 0.41
CDH16-202ENST00000394055 COL15A1P39059 1388 aa17.61■□□□□ 0.41
CDH16-202ENST00000394055 MED23Q9ULK4 1368 aa17.61■□□□□ 0.41
CDH16-202ENST00000394055 CCDC129Q6ZRS4 1044 aa17.61■□□□□ 0.41
CDH16-202ENST00000394055 NECAB1Q8N987 351 aa17.61■□□□□ 0.41
CDH16-202ENST00000394055 KCNB2Q92953 911 aa17.61■□□□□ 0.41
CDH16-202ENST00000394055 SEC62Q99442 399 aaKnown RBP17.61■□□□□ 0.41
CDH16-202ENST00000394055 CCDC85AQ96PX6 553 aaPredicted RBP17.6■□□□□ 0.41
CDH16-202ENST00000394055 TIMM10P62072 90 aa17.6■□□□□ 0.41
CDH16-202ENST00000394055 LRRC24Q50LG9 513 aa17.6■□□□□ 0.41
CDH16-202ENST00000394055 ATG9AQ7Z3C6 839 aa17.6■□□□□ 0.41
CDH16-202ENST00000394055 DNAJC10Q8IXB1 793 aa17.6■□□□□ 0.41
CDH16-202ENST00000394055 TM6SF1Q9BZW5 370 aa17.6■□□□□ 0.41
CDH16-202ENST00000394055 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.6■□□□□ 0.41
CDH16-202ENST00000394055 ZNF445P59923 1031 aa17.59■□□□□ 0.41
CDH16-202ENST00000394055 SYT1P21579 422 aa17.59■□□□□ 0.41
CDH16-202ENST00000394055 NASPP49321 788 aaPredicted RBP17.59■□□□□ 0.41
CDH16-202ENST00000394055 CCDC191Q8NCU4 936 aa17.59■□□□□ 0.41
CDH16-202ENST00000394055 PIGBQ92521 554 aa17.59■□□□□ 0.41
CDH16-202ENST00000394055 ME3Q16798 604 aa17.58■□□□□ 0.41
CDH16-202ENST00000394055 SLFNL1Q499Z3 407 aa17.58■□□□□ 0.41
CDH16-202ENST00000394055 SNRKQ9NRH2 765 aa17.58■□□□□ 0.41
CDH16-202ENST00000394055 TNS2Q63HR2 1409 aa17.58■□□□□ 0.41
CDH16-202ENST00000394055 NUP188Q5SRE5 1749 aa17.58■□□□□ 0.4
CDH16-202ENST00000394055 TAF5LO75529 589 aa17.58■□□□□ 0.4
CDH16-202ENST00000394055 ST3GAL1Q11201 340 aa17.58■□□□□ 0.4
CDH16-202ENST00000394055 PUS3Q9BZE2 481 aaKnown RBP17.58■□□□□ 0.4
CDH16-202ENST00000394055 TOGARAM1Q9Y4F4 1720 aa17.58■□□□□ 0.4
CDH16-202ENST00000394055 KAT6BQ8WYB5 2073 aa17.58■□□□□ 0.4
CDH16-202ENST00000394055 PAPPAQ13219 1627 aa17.57■□□□□ 0.4
CDH16-202ENST00000394055 SYCE3A1L190 88 aa17.57■□□□□ 0.4
CDH16-202ENST00000394055 STX6O43752 255 aa17.57■□□□□ 0.4
CDH16-202ENST00000394055 GADD45BO75293 160 aaPredicted RBP17.57■□□□□ 0.4
CDH16-202ENST00000394055 GJB2P29033 226 aa17.57■□□□□ 0.4
CDH16-202ENST00000394055 PRIM1P49642 420 aaKnown RBP17.57■□□□□ 0.4
CDH16-202ENST00000394055 TPCN1Q9ULQ1 816 aa17.57■□□□□ 0.4
CDH16-202ENST00000394055 TJP1Q07157 1748 aa17.57■□□□□ 0.4
CDH16-202ENST00000394055 RNF20Q5VTR2 975 aa17.57■□□□□ 0.4
CDH16-202ENST00000394055 HAUS7Q99871 368 aa17.57■□□□□ 0.4
CDH16-202ENST00000394055 ZNF609O15014 1411 aa17.57■□□□□ 0.4
CDH16-202ENST00000394055 GOLIM4O00461 696 aa17.57■□□□□ 0.4
CDH16-202ENST00000394055 ZSCAN22P10073 491 aaPredicted RBP17.57■□□□□ 0.4
CDH16-202ENST00000394055 FGD1P98174 961 aa17.57■□□□□ 0.4
CDH16-202ENST00000394055 BLOC1S2Q6QNY1 142 aa17.57■□□□□ 0.4
CDH16-202ENST00000394055 USP48Q86UV5 1035 aa17.56■□□□□ 0.4
CDH16-202ENST00000394055 CNPY2Q9Y2B0 182 aa17.56■□□□□ 0.4
CDH16-202ENST00000394055 PSMA5P28066 241 aa17.56■□□□□ 0.4
CDH16-202ENST00000394055 RBSNQ9H1K0 784 aa17.56■□□□□ 0.4
CDH16-202ENST00000394055 MBD3O95983 291 aa17.55■□□□□ 0.4
CDH16-202ENST00000394055 FAM89AQ96GI7 184 aa17.55■□□□□ 0.4
CDH16-202ENST00000394055 ATG3Q9NT62 314 aa17.55■□□□□ 0.4
CDH16-202ENST00000394055 EYA2O00167 538 aa17.55■□□□□ 0.4
CDH16-202ENST00000394055 IL15P40933 162 aaPredicted RBP17.55■□□□□ 0.4
CDH16-202ENST00000394055 SYTL4Q96C24 671 aaPredicted RBP17.55■□□□□ 0.4
CDH16-202ENST00000394055 ZSCAN31Q96LW9 406 aaPredicted RBP17.55■□□□□ 0.4
CDH16-202ENST00000394055 SH2B1Q9NRF2 756 aaPredicted RBP17.55■□□□□ 0.4
CDH16-202ENST00000394055 TCHHQ07283 1943 aa17.54■□□□□ 0.4
CDH16-202ENST00000394055 TCIRG1Q13488 830 aa17.54■□□□□ 0.4
CDH16-202ENST00000394055 ISCA1Q9BUE6 129 aa17.54■□□□□ 0.4
CDH16-202ENST00000394055 VPS37CA5D8V6 355 aaPredicted RBP17.53■□□□□ 0.4
CDH16-202ENST00000394055 F13A1P00488 732 aa17.53■□□□□ 0.4
CDH16-202ENST00000394055 RPS6KB1P23443 525 aa17.53■□□□□ 0.4
CDH16-202ENST00000394055 GPTP24298 496 aa17.53■□□□□ 0.4
CDH16-202ENST00000394055 STK3Q13188 491 aa17.53■□□□□ 0.4
CDH16-202ENST00000394055 SYNE4Q8N205 404 aa17.53■□□□□ 0.4
CDH16-202ENST00000394055 A0A1B0GUL7 405 aa17.53■□□□□ 0.4
CDH16-202ENST00000394055 KIF6Q6ZMV9 814 aa17.53■□□□□ 0.4
CDH16-202ENST00000394055 KBTBD3Q8NAB2 608 aa17.53■□□□□ 0.4
CDH16-202ENST00000394055 PAG1Q9NWQ8 432 aa17.53■□□□□ 0.4
CDH16-202ENST00000394055 NHSL1Q5SYE7 1610 aa17.53■□□□□ 0.4
CDH16-202ENST00000394055 CCDC57Q2TAC2 916 aa17.53■□□□□ 0.4
CDH16-202ENST00000394055 MCMDC2Q4G0Z9 681 aa17.53■□□□□ 0.4
CDH16-202ENST00000394055 JCADQ9P266 1359 aa17.52■□□□□ 0.4
CDH16-202ENST00000394055 FIBPO43427 364 aa17.52■□□□□ 0.4
CDH16-202ENST00000394055 PDE4CQ08493 712 aa17.52■□□□□ 0.4
CDH16-202ENST00000394055 TRIM44Q96DX7 344 aaPredicted RBP17.52■□□□□ 0.4
CDH16-202ENST00000394055 TOB2Q14106 344 aaPredicted RBP17.52■□□□□ 0.39
CDH16-202ENST00000394055 MTMR6Q9Y217 621 aa17.52■□□□□ 0.39
CDH16-202ENST00000394055 HMG20BQ9P0W2 317 aa17.51■□□□□ 0.39
CDH16-202ENST00000394055 A0A0G2JS52 829 aa17.51■□□□□ 0.39
CDH16-202ENST00000394055 STARD3NLO95772 234 aa17.51■□□□□ 0.39
CDH16-202ENST00000394055 IFIT1P09914 478 aaKnown RBP17.51■□□□□ 0.39
CDH16-202ENST00000394055 HLFQ16534 295 aa17.51■□□□□ 0.39
CDH16-202ENST00000394055 CYP21A2P08686 494 aa17.5■□□□□ 0.39
CDH16-202ENST00000394055 USPL1Q5W0Q7 1092 aa17.5■□□□□ 0.39
CDH16-202ENST00000394055 LRSAM1Q6UWE0 723 aa17.5■□□□□ 0.39
CDH16-202ENST00000394055 ANP32BQ92688 251 aaKnown RBP17.5■□□□□ 0.39
CDH16-202ENST00000394055 CEP126Q9P2H0 1117 aa17.5■□□□□ 0.39
CDH16-202ENST00000394055 ADORA1P30542 326 aa17.5■□□□□ 0.39
CDH16-202ENST00000394055 TAF7LQ5H9L4 462 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms