RNA–Protein interactions for RNA: ENST00000393780.3

GAP43-202, Transcript of growth associated protein 43, humanhuman

TSL 1 (best) BASIC

Gene GAP43, Length 1,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43-202ENST00000393780 GLI3P10071 1580 aa16.7■□□□□ 0.26
GAP43-202ENST00000393780 SNRPA1P09661 255 aaKnown RBP16.69■□□□□ 0.26
GAP43-202ENST00000393780 SLC39A6Q13433 755 aa16.69■□□□□ 0.26
GAP43-202ENST00000393780 LMOD2Q6P5Q4 547 aa16.69■□□□□ 0.26
GAP43-202ENST00000393780 ANKRD13DQ6ZTN6 518 aa16.69■□□□□ 0.26
GAP43-202ENST00000393780 MEGF6O75095 1541 aa16.69■□□□□ 0.26
GAP43-202ENST00000393780 TNNI3KQ59H18 835 aa16.68■□□□□ 0.26
GAP43-202ENST00000393780 TTC6Q86TZ1 520 aa16.68■□□□□ 0.26
GAP43-202ENST00000393780 IFNL2Q8IZJ0 200 aa16.68■□□□□ 0.26
GAP43-202ENST00000393780 PIBF1Q8WXW3 757 aa16.68■□□□□ 0.26
GAP43-202ENST00000393780 FPGT-TNNI3KV9GXZ4 949 aa16.68■□□□□ 0.26
GAP43-202ENST00000393780 CCDC192P0DO97 292 aa16.68■□□□□ 0.26
GAP43-202ENST00000393780 MYL6BP14649 208 aa16.68■□□□□ 0.26
GAP43-202ENST00000393780 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
GAP43-202ENST00000393780 GIMAP6Q6P9H5 292 aa16.68■□□□□ 0.26
GAP43-202ENST00000393780 CDC37L1Q7L3B6 337 aa16.68■□□□□ 0.26
GAP43-202ENST00000393780 ZNF589Q86UQ0 364 aaPredicted RBP16.68■□□□□ 0.26
GAP43-202ENST00000393780 MAP7D2Q96T17 732 aa16.68■□□□□ 0.26
GAP43-202ENST00000393780 U3KPZ7 1027 aaPredicted RBP16.68■□□□□ 0.26
GAP43-202ENST00000393780 DYNC1I1O14576 645 aa16.67■□□□□ 0.26
GAP43-202ENST00000393780 TPM3P06753 285 aa16.67■□□□□ 0.26
GAP43-202ENST00000393780 NFATC2IPQ8NCF5 419 aa16.67■□□□□ 0.26
GAP43-202ENST00000393780 ZNF496Q96IT1 587 aaPredicted RBP16.67■□□□□ 0.26
GAP43-202ENST00000393780 SCAND2PQ9GZW5 306 aaPredicted RBP16.67■□□□□ 0.26
GAP43-202ENST00000393780 DBNLQ9UJU6 430 aaKnown RBP16.67■□□□□ 0.26
GAP43-202ENST00000393780 UQCRHLA0A096LP55 91 aa16.66■□□□□ 0.26
GAP43-202ENST00000393780 UQCRHP07919 91 aa16.66■□□□□ 0.26
GAP43-202ENST00000393780 KLHDC4Q8TBB5 520 aa16.66■□□□□ 0.26
GAP43-202ENST00000393780 DDX54Q8TDD1 881 aaKnown RBP16.66■□□□□ 0.26
GAP43-202ENST00000393780 DCAF5Q96JK2 942 aa16.66■□□□□ 0.26
GAP43-202ENST00000393780 MYH15Q9Y2K3 1946 aa16.66■□□□□ 0.26
GAP43-202ENST00000393780 LAMA4Q16363 1823 aa16.66■□□□□ 0.26
GAP43-202ENST00000393780 FMNL2Q96PY5 1086 aa16.66■□□□□ 0.26
GAP43-202ENST00000393780 HAUS7Q99871 368 aa16.66■□□□□ 0.26
GAP43-202ENST00000393780 TMEM94Q12767 1356 aa16.66■□□□□ 0.26
GAP43-202ENST00000393780 ZNF609O15014 1411 aa16.65■□□□□ 0.26
GAP43-202ENST00000393780 CASP7P55210 303 aa16.65■□□□□ 0.26
GAP43-202ENST00000393780 TFCP2Q12800 502 aa16.65■□□□□ 0.26
GAP43-202ENST00000393780 C19orf44Q9H6X5 657 aa16.65■□□□□ 0.26
GAP43-202ENST00000393780 SPTLC3Q9NUV7 552 aa16.65■□□□□ 0.26
GAP43-202ENST00000393780 NLRP2Q9NX02 1062 aa16.65■□□□□ 0.26
GAP43-202ENST00000393780 TAF6LQ9Y6J9 622 aa16.65■□□□□ 0.26
GAP43-202ENST00000393780 NUP188Q5SRE5 1749 aa16.65■□□□□ 0.26
GAP43-202ENST00000393780 ZC3H6P61129 1189 aaKnown RBP16.64■□□□□ 0.26
GAP43-202ENST00000393780 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.26
GAP43-202ENST00000393780 MAP3K11Q16584 847 aa16.64■□□□□ 0.26
GAP43-202ENST00000393780 RBM43Q6ZSC3 357 aaKnown RBP16.64■□□□□ 0.26
GAP43-202ENST00000393780 PROSER2Q86WR7 435 aaPredicted RBP16.64■□□□□ 0.26
GAP43-202ENST00000393780 TTC5Q8N0Z6 440 aa16.64■□□□□ 0.26
GAP43-202ENST00000393780 GTF3C6Q969F1 213 aa16.64■□□□□ 0.26
GAP43-202ENST00000393780 NUP62CLQ9H1M0 184 aa16.64■□□□□ 0.26
GAP43-202ENST00000393780 SPEF2Q9C093 1822 aa16.64■□□□□ 0.26
GAP43-202ENST00000393780 SH3TC1Q8TE82 1336 aa16.64■□□□□ 0.25
GAP43-202ENST00000393780 NEK1Q96PY6 1258 aa16.64■□□□□ 0.25
GAP43-202ENST00000393780 DDX19AQ9NUU7 478 aaKnown RBP16.64■□□□□ 0.25
GAP43-202ENST00000393780 USP16Q9Y5T5 823 aa16.64■□□□□ 0.25
GAP43-202ENST00000393780 PALLDQ8WX93 1383 aa16.64■□□□□ 0.25
GAP43-202ENST00000393780 DCCP43146 1447 aa16.63■□□□□ 0.25
GAP43-202ENST00000393780 MCMDC2Q4G0Z9 681 aa16.63■□□□□ 0.25
GAP43-202ENST00000393780 PLBD2Q8NHP8 589 aa16.63■□□□□ 0.25
GAP43-202ENST00000393780 FAM200AQ8TCP9 573 aa16.63■□□□□ 0.25
GAP43-202ENST00000393780 PRIMPOLQ96LW4 560 aa16.63■□□□□ 0.25
GAP43-202ENST00000393780 GPR108Q9NPR9 543 aa16.63■□□□□ 0.25
GAP43-202ENST00000393780 TJP1Q07157 1748 aa16.63■□□□□ 0.25
GAP43-202ENST00000393780 UBR2Q8IWV8 1755 aa16.63■□□□□ 0.25
GAP43-202ENST00000393780 NOLC1Q14978 699 aaKnown RBP eCLIP16.62■□□□□ 0.25
GAP43-202ENST00000393780 MTERF4Q7Z6M4 381 aaKnown RBP16.62■□□□□ 0.25
GAP43-202ENST00000393780 LIG1P18858 919 aa16.62■□□□□ 0.25
GAP43-202ENST00000393780 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
GAP43-202ENST00000393780 UBE3BQ7Z3V4 1068 aa16.62■□□□□ 0.25
GAP43-202ENST00000393780 LEO1Q8WVC0 666 aaPredicted RBP16.62■□□□□ 0.25
GAP43-202ENST00000393780 EDC3Q96F86 508 aaKnown RBP16.62■□□□□ 0.25
GAP43-202ENST00000393780 SPATA32Q96LK8 384 aa16.62■□□□□ 0.25
GAP43-202ENST00000393780 TCEANC2Q96MN5 208 aa16.62■□□□□ 0.25
GAP43-202ENST00000393780 LLPHQ9BRT6 129 aaKnown RBP16.62■□□□□ 0.25
GAP43-202ENST00000393780 CYP27B1O15528 508 aa16.61■□□□□ 0.25
GAP43-202ENST00000393780 HMGB1P09429 215 aaKnown RBP16.61■□□□□ 0.25
GAP43-202ENST00000393780 RESTQ13127 1097 aa16.61■□□□□ 0.25
GAP43-202ENST00000393780 FERMT3Q86UX7 667 aa16.61■□□□□ 0.25
GAP43-202ENST00000393780 KBTBD3Q8NAB2 608 aa16.61■□□□□ 0.25
GAP43-202ENST00000393780 DBNDD2Q9BQY9 259 aa16.61■□□□□ 0.25
GAP43-202ENST00000393780 CLSTN2Q9H4D0 955 aa16.61■□□□□ 0.25
GAP43-202ENST00000393780 A0A087WZG4 1122 aa16.6■□□□□ 0.25
GAP43-202ENST00000393780 GOLGA6L6A8MZA4 724 aa16.6■□□□□ 0.25
GAP43-202ENST00000393780 H7C1W4 665 aa16.6■□□□□ 0.25
GAP43-202ENST00000393780 AP5Z1O43299 807 aa16.6■□□□□ 0.25
GAP43-202ENST00000393780 HMGN5P82970 282 aaKnown RBP16.6■□□□□ 0.25
GAP43-202ENST00000393780 TYRO3Q06418 890 aa16.6■□□□□ 0.25
GAP43-202ENST00000393780 MYRIPQ8NFW9 859 aa16.6■□□□□ 0.25
GAP43-202ENST00000393780 SMARCC2Q8TAQ2 1214 aa16.6■□□□□ 0.25
GAP43-202ENST00000393780 ZSCAN16Q9H4T2 348 aaPredicted RBP16.6■□□□□ 0.25
GAP43-202ENST00000393780 MRVI1Q9Y6F6 885 aa16.6■□□□□ 0.25
GAP43-202ENST00000393780 PAPPAQ13219 1627 aa16.6■□□□□ 0.25
GAP43-202ENST00000393780 DTNBO60941 627 aa16.6■□□□□ 0.25
GAP43-202ENST00000393780 TTC12Q9H892 705 aaPredicted RBP16.6■□□□□ 0.25
GAP43-202ENST00000393780 HELLSQ9NRZ9 838 aa16.6■□□□□ 0.25
GAP43-202ENST00000393780 TNS3Q68CZ2 1445 aa16.59■□□□□ 0.25
GAP43-202ENST00000393780 CYP21A2P08686 494 aa16.59■□□□□ 0.25
GAP43-202ENST00000393780 TPRNQ4KMQ1 711 aa16.59■□□□□ 0.25
GAP43-202ENST00000393780 Q6ZUG5 572 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms