RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 LRRC8AQ8IWT6 810 aa17.12■□□□□ 0.33
SFXN3-202ENST00000393459 CLASRPQ8N2M8 674 aaKnown RBP17.12■□□□□ 0.33
SFXN3-202ENST00000393459 RBM33Q96EV2 1170 aaKnown RBP17.12■□□□□ 0.33
SFXN3-202ENST00000393459 TMEM87AQ8NBN3 555 aa17.12■□□□□ 0.33
SFXN3-202ENST00000393459 FEZ1Q99689 392 aa17.12■□□□□ 0.33
SFXN3-202ENST00000393459 NCOA5Q9HCD5 579 aaKnown RBP17.12■□□□□ 0.33
SFXN3-202ENST00000393459 ITSN1Q15811 1721 aa17.12■□□□□ 0.33
SFXN3-202ENST00000393459 A0A0D9SFI3 127 aa17.12■□□□□ 0.33
SFXN3-202ENST00000393459 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
SFXN3-202ENST00000393459 AKAP12Q02952 1782 aa17.11■□□□□ 0.33
SFXN3-202ENST00000393459 ME1P48163 572 aa17.11■□□□□ 0.33
SFXN3-202ENST00000393459 CEP170BQ9Y4F5 1589 aaPredicted RBP17.11■□□□□ 0.33
SFXN3-202ENST00000393459 KIF1BPQ96EK5 621 aa17.11■□□□□ 0.33
SFXN3-202ENST00000393459 EYA1Q99502 592 aa17.11■□□□□ 0.33
SFXN3-202ENST00000393459 DNAJC2Q99543 621 aaKnown RBP17.11■□□□□ 0.33
SFXN3-202ENST00000393459 TEFQ10587 303 aa17.1■□□□□ 0.33
SFXN3-202ENST00000393459 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
SFXN3-202ENST00000393459 SDF4Q9BRK5 362 aa17.1■□□□□ 0.33
SFXN3-202ENST00000393459 TMC6Q7Z403 805 aa17.1■□□□□ 0.33
SFXN3-202ENST00000393459 CCAR1Q8IX12 1150 aaKnown RBP17.1■□□□□ 0.33
SFXN3-202ENST00000393459 GJB4Q9NTQ9 266 aa17.1■□□□□ 0.33
SFXN3-202ENST00000393459 A0A1B0GVL5 298 aa17.09■□□□□ 0.33
SFXN3-202ENST00000393459 PRAMEF22A3QJZ6 481 aa17.09■□□□□ 0.33
SFXN3-202ENST00000393459 ARHGAP29Q52LW3 1261 aa17.09■□□□□ 0.33
SFXN3-202ENST00000393459 ACEP12821 1306 aa17.09■□□□□ 0.33
SFXN3-202ENST00000393459 RIMS1Q86UR5 1692 aaKnown RBP17.09■□□□□ 0.33
SFXN3-202ENST00000393459 NOL10Q9BSC4 688 aaKnown RBP17.09■□□□□ 0.33
SFXN3-202ENST00000393459 ZNF446Q9NWS9 450 aa17.09■□□□□ 0.33
SFXN3-202ENST00000393459 POLR3DP05423 398 aaPredicted RBP17.08■□□□□ 0.33
SFXN3-202ENST00000393459 STAP2Q9UGK3 403 aa17.08■□□□□ 0.33
SFXN3-202ENST00000393459 DNAI1Q9UI46 699 aa17.08■□□□□ 0.33
SFXN3-202ENST00000393459 TOPAZ1Q8N9V7 1692 aa17.08■□□□□ 0.32
SFXN3-202ENST00000393459 ANKRD65E5RJM6 399 aa17.08■□□□□ 0.32
SFXN3-202ENST00000393459 TPM3P06753 285 aa17.08■□□□□ 0.32
SFXN3-202ENST00000393459 ZRSR1Q15695 479 aaKnown RBP17.08■□□□□ 0.32
SFXN3-202ENST00000393459 CDK12Q9NYV4 1490 aaPredicted RBP17.07■□□□□ 0.32
SFXN3-202ENST00000393459 KIAA0232Q92628 1395 aa17.07■□□□□ 0.32
SFXN3-202ENST00000393459 SLC27A2O14975 620 aa17.07■□□□□ 0.32
SFXN3-202ENST00000393459 LMOD1P29536 600 aaPredicted RBP17.07■□□□□ 0.32
SFXN3-202ENST00000393459 NGDNQ8NEJ9 315 aaKnown RBP17.07■□□□□ 0.32
SFXN3-202ENST00000393459 ZNF397Q8NF99 534 aaPredicted RBP17.07■□□□□ 0.32
SFXN3-202ENST00000393459 PLA2G4DQ86XP0 818 aa17.07■□□□□ 0.32
SFXN3-202ENST00000393459 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
SFXN3-202ENST00000393459 TIGD1Q96MW7 591 aa17.07■□□□□ 0.32
SFXN3-202ENST00000393459 URI1O94763 535 aaPredicted RBP17.07■□□□□ 0.32
SFXN3-202ENST00000393459 HNRNPH2P55795 449 aaKnown RBP17.07■□□□□ 0.32
SFXN3-202ENST00000393459 VPS53Q5VIR6 699 aa17.07■□□□□ 0.32
SFXN3-202ENST00000393459 LGR6Q9HBX8 967 aa17.07■□□□□ 0.32
SFXN3-202ENST00000393459 TTC21BQ7Z4L5 1316 aa17.06■□□□□ 0.32
SFXN3-202ENST00000393459 SNW1Q13573 536 aaKnown RBP17.06■□□□□ 0.32
SFXN3-202ENST00000393459 RUFY2Q8WXA3 655 aa17.06■□□□□ 0.32
SFXN3-202ENST00000393459 GOLPH3LQ9H4A5 285 aa17.06■□□□□ 0.32
SFXN3-202ENST00000393459 CLSTN2Q9H4D0 955 aa17.06■□□□□ 0.32
SFXN3-202ENST00000393459 PAXBP1Q9Y5B6 917 aa17.06■□□□□ 0.32
SFXN3-202ENST00000393459 CCDC171Q6TFL3 1326 aa17.06■□□□□ 0.32
SFXN3-202ENST00000393459 A0A0G2JLW4 131 aa17.06■□□□□ 0.32
SFXN3-202ENST00000393459 GLRX3O76003 335 aaKnown RBP17.05■□□□□ 0.32
SFXN3-202ENST00000393459 ANKLE2Q86XL3 938 aa17.05■□□□□ 0.32
SFXN3-202ENST00000393459 IFNKQ9P0W0 207 aa17.05■□□□□ 0.32
SFXN3-202ENST00000393459 USP6P35125 1406 aa17.05■□□□□ 0.32
SFXN3-202ENST00000393459 TNNT3P45378 269 aaPredicted RBP17.05■□□□□ 0.32
SFXN3-202ENST00000393459 NLRP6P59044 892 aa17.05■□□□□ 0.32
SFXN3-202ENST00000393459 Q6ZUG5 572 aa17.05■□□□□ 0.32
SFXN3-202ENST00000393459 SSH3Q8TE77 659 aa17.05■□□□□ 0.32
SFXN3-202ENST00000393459 ZSWIM6Q9HCJ5 1215 aa17.05■□□□□ 0.32
SFXN3-202ENST00000393459 ECHDC1Q9NTX5 307 aa17.05■□□□□ 0.32
SFXN3-202ENST00000393459 XRN1Q8IZH2 1706 aaKnown RBP17.05■□□□□ 0.32
SFXN3-202ENST00000393459 KINO60870 393 aaKnown RBP17.05■□□□□ 0.32
SFXN3-202ENST00000393459 ST5P78524 1137 aa17.05■□□□□ 0.32
SFXN3-202ENST00000393459 FSIP1Q8NA03 581 aa17.05■□□□□ 0.32
SFXN3-202ENST00000393459 SCAND2PQ9GZW5 306 aaPredicted RBP17.05■□□□□ 0.32
SFXN3-202ENST00000393459 SLU7O95391 586 aaKnown RBP17.04■□□□□ 0.32
SFXN3-202ENST00000393459 PROSER3Q2NL68 480 aa17.04■□□□□ 0.32
SFXN3-202ENST00000393459 MPRIPQ6WCQ1 1025 aa17.04■□□□□ 0.32
SFXN3-202ENST00000393459 AEBP2Q6ZN18 517 aaPredicted RBP17.04■□□□□ 0.32
SFXN3-202ENST00000393459 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
SFXN3-202ENST00000393459 CLCN6P51797 869 aa17.04■□□□□ 0.32
SFXN3-202ENST00000393459 TTLL5Q6EMB2 1281 aa17.04■□□□□ 0.32
SFXN3-202ENST00000393459 CCDC73Q6ZRK6 1079 aa17.04■□□□□ 0.32
SFXN3-202ENST00000393459 EAF2Q96CJ1 260 aaPredicted RBP17.04■□□□□ 0.32
SFXN3-202ENST00000393459 NPHP3Q7Z494 1330 aa17.04■□□□□ 0.32
SFXN3-202ENST00000393459 CCDC66A2RUB6 948 aa17.03■□□□□ 0.32
SFXN3-202ENST00000393459 CAPN2P17655 700 aa17.03■□□□□ 0.32
SFXN3-202ENST00000393459 SF3A1Q15459 793 aaKnown RBP17.03■□□□□ 0.32
SFXN3-202ENST00000393459 LMOD2Q6P5Q4 547 aa17.03■□□□□ 0.32
SFXN3-202ENST00000393459 C10orf67Q8IYJ2 551 aa17.03■□□□□ 0.32
SFXN3-202ENST00000393459 CHMP4CQ96CF2 233 aa17.03■□□□□ 0.32
SFXN3-202ENST00000393459 USP28Q96RU2 1077 aa17.03■□□□□ 0.32
SFXN3-202ENST00000393459 MORC2Q9Y6X9 1032 aaPredicted RBP17.03■□□□□ 0.32
SFXN3-202ENST00000393459 NRKQ7Z2Y5 1582 aa17.03■□□□□ 0.32
SFXN3-202ENST00000393459 APOBRQ0VD83 1088 aa17.03■□□□□ 0.32
SFXN3-202ENST00000393459 DDX46Q7L014 1031 aaKnown RBP17.03■□□□□ 0.32
SFXN3-202ENST00000393459 SH2B1Q9NRF2 756 aaPredicted RBP17.03■□□□□ 0.32
SFXN3-202ENST00000393459 DDX19AQ9NUU7 478 aaKnown RBP17.03■□□□□ 0.32
SFXN3-202ENST00000393459 GNAT3A8MTJ3 354 aa17.02■□□□□ 0.32
SFXN3-202ENST00000393459 TOB2Q14106 344 aaPredicted RBP17.02■□□□□ 0.32
SFXN3-202ENST00000393459 ADAMTSL3P82987 1691 aa17.02■□□□□ 0.32
SFXN3-202ENST00000393459 SRCAPQ6ZRS2 3230 aa17.02■□□□□ 0.32
SFXN3-202ENST00000393459 MYL6BP14649 208 aa17.02■□□□□ 0.32
SFXN3-202ENST00000393459 NECTIN1Q15223 517 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms