RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 CNTROBQ8N137 903 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.73□□□□□ -1.81
PHF3-202ENST00000393387 STAG1Q8WVM7 1258 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 ASZ1Q8WWH4 475 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 GOLGA1Q92805 767 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 GDAP1L1Q96MZ0 367 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 UBAC1Q9BSL1 405 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 ZBTB21Q9ULJ3 1066 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 SFI1A8K8P3 1242 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 ECM2O94769 699 aaPredicted RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 GSTA5Q7RTV2 222 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 RASEFQ8IZ41 740 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 TNPO1Q92973 898 aaKnown RBP3.73□□□□□ -1.81
PHF3-202ENST00000393387 TSG101Q99816 390 aa3.73□□□□□ -1.81
PHF3-202ENST00000393387 APAF1O14727 1248 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 DNAJC6O75061 913 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 TRPA1O75762 1119 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 HNRNPCP07910 306 aaKnown RBP eCLIP3.72□□□□□ -1.815e-8■■■■□ 25.1
PHF3-202ENST00000393387 PPP2R5CQ13362 524 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 ELF2Q15723 593 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 RSPH3Q86UC2 560 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 ZNF354CQ86Y25 554 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 GFM2Q969S9 779 aaKnown RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 SPDL1Q96EA4 605 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 LZTFL1Q9NQ48 299 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 MTUS1Q9ULD2 1270 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 TACC3Q9Y6A5 838 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 CCDC172P0C7W6 258 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 ZFXP17010 805 aaPredicted RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 PCYT1AP49585 367 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 RAP1GDS1P52306 607 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 PSMC1P62191 440 aaKnown RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 UBE3AQ05086 875 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 KIAA0753Q2KHM9 967 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 GIMAP6Q6P9H5 292 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 RAB11FIP4Q86YS3 637 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 CCDC125Q86Z20 511 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 CCDC110Q8TBZ0 833 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 LRRD1A4D1F6 860 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 GOLGA6CA6NDK9 693 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 CREB3O43889 395 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 SLU7O95391 586 aaKnown RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 CAVIN2O95810 425 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 GOLGA6DP0CG33 693 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 XRCC6P12956 609 aaKnown RBP eCLIP3.72□□□□□ -1.813e-6■■■■■ 31.2
PHF3-202ENST00000393387 CALCOCO2Q13137 446 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 MVPQ14764 893 aaKnown RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 CCDC186Q7Z3E2 898 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 KIAA2013Q8IYS2 634 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 PPP1R9AQ9ULJ8 1098 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 CCDC69A6NI79 296 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 NBPF20Q3BBV1 942 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 CCDC40Q4G0X9 1142 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 CCDC50Q8IVM0 306 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 HAUS1Q96CS2 278 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 JAKMIP1Q96N16 626 aaKnown RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 SPZ1Q9BXG8 430 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 EXOC1Q9NV70 894 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 TSC22D4Q9Y3Q8 395 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 PABPN1LA6NDY0 278 aaKnown RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 FKBP5Q13451 457 aaPredicted RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 SNCBQ16143 134 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 LONRF3Q496Y0 759 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 HP1BP3Q5SSJ5 553 aaPredicted RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 PDZD8Q8NEN9 1154 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 KIAA1524Q8TCG1 905 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 BACH2Q9BYV9 841 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 CLSTN2Q9H4D0 955 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 PPANQ9NQ55 473 aaKnown RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 PAIP2BQ9ULR5 123 aaKnown RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 CYP46A1Q9Y6A2 500 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 PPFIA2O75334 1257 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 SKILP12757 684 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 HCLS1P14317 486 aaPredicted RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 ATP2A2P16615 1042 aaKnown RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 NFE2L2Q16236 605 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 NBPF3Q9H094 633 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 YY1AP1Q9H869 796 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 GOLGA6AQ9NYA3 693 aa3.72□□□□□ -1.81
PHF3-202ENST00000393387 SCHIP1Q9P0W5 487 aaPredicted RBP3.72□□□□□ -1.81
PHF3-202ENST00000393387 RAD54L2Q9Y4B4 1467 aa3.71□□□□□ -1.81
PHF3-202ENST00000393387 CTAGE9A4FU28 777 aa3.71□□□□□ -1.81
PHF3-202ENST00000393387 MECOMQ03112 1051 aa3.71□□□□□ -1.81
PHF3-202ENST00000393387 ARID5AQ03989 594 aa3.71□□□□□ -1.81
PHF3-202ENST00000393387 DMPKQ09013 629 aa3.71□□□□□ -1.81
PHF3-202ENST00000393387 METTL24Q5JXM2 366 aa3.71□□□□□ -1.81
PHF3-202ENST00000393387 SDCCAG8Q86SQ7 713 aaPredicted RBP3.71□□□□□ -1.81
PHF3-202ENST00000393387 ZFYVE1Q9HBF4 777 aa3.71□□□□□ -1.81
PHF3-202ENST00000393387 VEZTQ9HBM0 779 aa3.71□□□□□ -1.81
PHF3-202ENST00000393387 RIOK3O14730 519 aaKnown RBP3.71□□□□□ -1.82
PHF3-202ENST00000393387 CEP104O60308 925 aa3.71□□□□□ -1.82
PHF3-202ENST00000393387 CETN2P41208 172 aa3.71□□□□□ -1.82
PHF3-202ENST00000393387 USP5P45974 858 aa3.71□□□□□ -1.82
PHF3-202ENST00000393387 ZSCAN26Q16670 478 aa3.71□□□□□ -1.82
PHF3-202ENST00000393387 GEN1Q17RS7 908 aa3.71□□□□□ -1.82
PHF3-202ENST00000393387 FAM180AQ6UWF9 173 aa3.71□□□□□ -1.82
PHF3-202ENST00000393387 SIX5Q8N196 739 aa3.71□□□□□ -1.82
PHF3-202ENST00000393387 PIP4K2CQ8TBX8 421 aa3.71□□□□□ -1.82
PHF3-202ENST00000393387 STAC3Q96MF2 364 aa3.71□□□□□ -1.82
PHF3-202ENST00000393387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.71□□□□□ -1.823e-7■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms