RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 OGFOD1Q8N543 542 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 PLPP7Q8NBV4 271 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 ACEP12821 1306 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 AATKQ6ZMQ8 1374 aa5.66□□□□□ -1.5
GTDC1-205ENST00000392871 NALCNQ8IZF0 1738 aa5.65□□□□□ -1.5
GTDC1-205ENST00000392871 NWD1Q149M9 1564 aa5.65□□□□□ -1.5
GTDC1-205ENST00000392871 ADGRL3Q9HAR2 1447 aa5.65□□□□□ -1.5
GTDC1-205ENST00000392871 DKK1O94907 266 aa5.65□□□□□ -1.5
GTDC1-205ENST00000392871 EIF4A2Q14240 407 aaKnown RBP5.65□□□□□ -1.5
GTDC1-205ENST00000392871 FBXO33Q7Z6M2 555 aa5.65□□□□□ -1.5
GTDC1-205ENST00000392871 C8orf58Q8NAV2 365 aa5.65□□□□□ -1.5
GTDC1-205ENST00000392871 PRIMPOLQ96LW4 560 aa5.65□□□□□ -1.5
GTDC1-205ENST00000392871 TTC21BQ7Z4L5 1316 aa5.65□□□□□ -1.5
GTDC1-205ENST00000392871 USP6P35125 1406 aa5.65□□□□□ -1.51
GTDC1-205ENST00000392871 H3BRB1 525 aa5.65□□□□□ -1.51
GTDC1-205ENST00000392871 HOXB1P14653 301 aaPredicted RBP5.65□□□□□ -1.51
GTDC1-205ENST00000392871 ERCC3P19447 782 aa5.65□□□□□ -1.51
GTDC1-205ENST00000392871 ECM1Q16610 540 aa5.65□□□□□ -1.51
GTDC1-205ENST00000392871 OCLNQ16625 522 aa5.65□□□□□ -1.51
GTDC1-205ENST00000392871 HSP90AB2PQ58FF8 381 aa5.65□□□□□ -1.51
GTDC1-205ENST00000392871 TRAF7Q6Q0C0 670 aa5.65□□□□□ -1.51
GTDC1-205ENST00000392871 CDCA7Q9BWT1 371 aaPredicted RBP5.65□□□□□ -1.51
GTDC1-205ENST00000392871 RWDD1Q9H446 243 aaPredicted RBP5.65□□□□□ -1.51
GTDC1-205ENST00000392871 TUT1Q9H6E5 874 aaKnown RBP5.65□□□□□ -1.51
GTDC1-205ENST00000392871 ZBTB40Q9NUA8 1239 aa5.65□□□□□ -1.51
GTDC1-205ENST00000392871 KIF16BQ96L93 1317 aa5.65□□□□□ -1.51
GTDC1-205ENST00000392871 TMEM94Q12767 1356 aa5.65□□□□□ -1.51
GTDC1-205ENST00000392871 ANKARQ7Z5J8 1434 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 RGPD1P0DJD0 1748 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 ATP5J2-PTCD1G3V325 749 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 VAMP4O75379 141 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 CT47B1P0C2W7 299 aaPredicted RBP5.64□□□□□ -1.51
GTDC1-205ENST00000392871 SLFNL1Q499Z3 407 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 SULT6B1Q6IMI4 303 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 MCM10Q7L590 875 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 RNF135Q8IUD6 432 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 MRPL50Q8N5N7 158 aaKnown RBP5.64□□□□□ -1.51
GTDC1-205ENST00000392871 DDX19BQ9UMR2 479 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 FMN2Q9NZ56 1722 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 NFKBIBQ15653 356 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 USB1Q9BQ65 265 aaKnown RBP5.64□□□□□ -1.51
GTDC1-205ENST00000392871 LNPKQ9C0E8 428 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 C19orf44Q9H6X5 657 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 SEPT3Q9UH03 358 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 ZNF335Q9H4Z2 1342 aaPredicted RBP5.64□□□□□ -1.51
GTDC1-205ENST00000392871 PIK3C2AO00443 1686 aa5.64□□□□□ -1.51
GTDC1-205ENST00000392871 STRCQ7RTU9 1775 aa5.63□□□□□ -1.51
GTDC1-205ENST00000392871 FOXO3O43524 673 aa5.63□□□□□ -1.51
GTDC1-205ENST00000392871 SMARCA5O60264 1052 aaPredicted RBP5.63□□□□□ -1.51
GTDC1-205ENST00000392871 ZNF853P0CG23 659 aa5.63□□□□□ -1.51
GTDC1-205ENST00000392871 HDAC1Q13547 482 aaPredicted RBP5.63□□□□□ -1.51
GTDC1-205ENST00000392871 NUTM2GQ5VZR2 741 aa5.63□□□□□ -1.51
GTDC1-205ENST00000392871 NGDNQ8NEJ9 315 aaKnown RBP5.63□□□□□ -1.51
GTDC1-205ENST00000392871 SLKQ9H2G2 1235 aaPredicted RBP5.63□□□□□ -1.51
GTDC1-205ENST00000392871 IFT57Q9NWB7 429 aa5.63□□□□□ -1.51
GTDC1-205ENST00000392871 PPP1R1BQ9UD71 204 aaPredicted RBP5.63□□□□□ -1.51
GTDC1-205ENST00000392871 SSH2Q76I76 1423 aa5.63□□□□□ -1.51
GTDC1-205ENST00000392871 ZBTB7BO15156 539 aaPredicted RBP5.63□□□□□ -1.51
GTDC1-205ENST00000392871 ACTN4O43707 911 aaKnown RBP5.63□□□□□ -1.51
GTDC1-205ENST00000392871 FRAT2O75474 233 aaPredicted RBP5.63□□□□□ -1.51
GTDC1-205ENST00000392871 TWISTNBQ3B726 338 aaPredicted RBP5.63□□□□□ -1.51
GTDC1-205ENST00000392871 ESCO1Q5FWF5 840 aa5.63□□□□□ -1.51
GTDC1-205ENST00000392871 C9orf131Q5VYM1 1079 aa5.63□□□□□ -1.51
GTDC1-205ENST00000392871 TBC1D32Q96NH3 1257 aa5.63□□□□□ -1.51
GTDC1-205ENST00000392871 PURBQ96QR8 312 aaKnown RBP5.63□□□□□ -1.51
GTDC1-205ENST00000392871 ORAI2Q96SN7 254 aa5.63□□□□□ -1.51
GTDC1-205ENST00000392871 PCDHB9Q9Y5E1 797 aa5.63□□□□□ -1.51
GTDC1-205ENST00000392871 MAP3K19Q56UN5 1328 aa5.63□□□□□ -1.51
GTDC1-205ENST00000392871 MARF1Q9Y4F3 1742 aaKnown RBP5.62□□□□□ -1.51
GTDC1-205ENST00000392871 CTHP32929 405 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 GNAI1P63096 354 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 ALDH1L2Q3SY69 923 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 BRICD5Q6PL45 260 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 CCDC125Q86Z20 511 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 SIRT2Q8IXJ6 389 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 SMC5Q8IY18 1101 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 MKNK1Q9BUB5 465 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 PNNQ9H307 717 aaKnown RBP5.62□□□□□ -1.51
GTDC1-205ENST00000392871 MIS18AQ9NYP9 233 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 ABCC4O15439 1325 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 RGS12O14924 1447 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 AAMPQ13685 434 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 SWI5Q1ZZU3 235 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 TSNAXIP1Q2TAA8 658 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 THAP11Q96EK4 314 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 NCOA3Q9Y6Q9 1424 aa5.62□□□□□ -1.51
GTDC1-205ENST00000392871 STRCP1A6NGW2 1772 aa5.61□□□□□ -1.51
GTDC1-205ENST00000392871 SFI1A8K8P3 1242 aa5.61□□□□□ -1.51
GTDC1-205ENST00000392871 IPO8O15397 1037 aaKnown RBP5.61□□□□□ -1.51
GTDC1-205ENST00000392871 ATF3P18847 181 aa5.61□□□□□ -1.51
GTDC1-205ENST00000392871 Q3C1V9 767 aa5.61□□□□□ -1.51
GTDC1-205ENST00000392871 KMT5BQ4FZB7 885 aa5.61□□□□□ -1.51
GTDC1-205ENST00000392871 SREK1Q8WXA9 508 aaKnown RBP5.61□□□□□ -1.51
GTDC1-205ENST00000392871 ZFRQ96KR1 1074 aaKnown RBP5.61□□□□□ -1.51
GTDC1-205ENST00000392871 CCDC85AQ96PX6 553 aaPredicted RBP5.61□□□□□ -1.51
GTDC1-205ENST00000392871 DNAAF2Q9NVR5 837 aaKnown RBP5.61□□□□□ -1.51
GTDC1-205ENST00000392871 VPS9D1Q9Y2B5 631 aa5.61□□□□□ -1.51
GTDC1-205ENST00000392871 C1orf167Q5SNV9 1468 aa5.61□□□□□ -1.51
GTDC1-205ENST00000392871 MSH6P52701 1360 aa5.61□□□□□ -1.51
GTDC1-205ENST00000392871 USP31Q70CQ4 1352 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms