RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 NEMFO60524 1076 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 TSPY3P0CV98 308 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 TSPY8P0CW00 308 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 TOP1P11387 765 aaKnown RBP4.55□□□□□ -1.68
UBR3-202ENST00000392632 UTP14CQ5TAP6 766 aaKnown RBP4.55□□□□□ -1.68
UBR3-202ENST00000392632 TMCO3Q6UWJ1 677 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 CEP128Q6ZU80 1094 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 FBF1Q8TES7 1133 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 PKNOX2Q96KN3 472 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.55□□□□□ -1.68
UBR3-202ENST00000392632 NACA2Q9H009 215 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 NBPF3Q9H094 633 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 GOPCQ9HD26 462 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 RASAL2Q9UJF2 1139 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 MAP7Q14244 749 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 MUM1L1Q5H9M0 696 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 CWC27Q6UX04 472 aaKnown RBP4.55□□□□□ -1.68
UBR3-202ENST00000392632 CDAN1Q8IWY9 1227 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 FLAD1Q8NFF5 587 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.55□□□□□ -1.68
UBR3-202ENST00000392632 PANK1Q8TE04 598 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 TIGD1Q96MW7 591 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 TTC14Q96N46 770 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 STK24Q9Y6E0 443 aa4.55□□□□□ -1.68
UBR3-202ENST00000392632 HLTFQ14527 1009 aaKnown RBP eCLIP4.54□□□□□ -1.68
UBR3-202ENST00000392632 GPR162Q16538 588 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 DUSP27Q5VZP5 1158 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 CNNM3Q8NE01 707 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 SMC6Q96SB8 1091 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 CCT6AP40227 531 aaKnown RBP4.54□□□□□ -1.68
UBR3-202ENST00000392632 TMEM67Q5HYA8 995 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 SELENOOQ9BVL4 669 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 CSRNP2Q9H175 543 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 VAT1LQ9HCJ6 419 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 EXOC1Q9NV70 894 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 ORC3Q9UBD5 711 aaPredicted RBP4.54□□□□□ -1.68
UBR3-202ENST00000392632 GRIN2BQ13224 1484 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 CUX1P39880 1505 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 AKR1B10O60218 316 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 STX10O60499 249 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 FAM13AO94988 1023 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 GNAT2P19087 354 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 GNA11P29992 359 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 DNM2P50570 870 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 SPOUT1Q5T280 376 aaKnown RBP4.54□□□□□ -1.68
UBR3-202ENST00000392632 KLHL10Q6JEL2 608 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 GIMAP7Q8NHV1 300 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 NCOA7Q8NI08 942 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.54□□□□□ -1.68
UBR3-202ENST00000392632 HMG20BQ9P0W2 317 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 AMOTL2Q9Y2J4 779 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 PLEKHH1Q9ULM0 1364 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 PRG4Q92954 1404 aaPredicted RBP4.54□□□□□ -1.68
UBR3-202ENST00000392632 GPTP24298 496 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 PPP2R1AP30153 589 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 RBM25P49756 843 aaKnown RBP4.54□□□□□ -1.68
UBR3-202ENST00000392632 CUL4BQ13620 913 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 NAA16Q6N069 864 aaPredicted RBP4.54□□□□□ -1.68
UBR3-202ENST00000392632 AFAP1L2Q8N4X5 818 aa4.54□□□□□ -1.68
UBR3-202ENST00000392632 ZCRB1Q8TBF4 217 aaKnown RBP4.54□□□□□ -1.68
UBR3-202ENST00000392632 NUP88Q99567 741 aaPredicted RBP4.54□□□□□ -1.68
UBR3-202ENST00000392632 SPINK5Q9NQ38 1064 aaPredicted RBP4.54□□□□□ -1.68
UBR3-202ENST00000392632 NOB1Q9ULX3 412 aaKnown RBP4.54□□□□□ -1.68
UBR3-202ENST00000392632 H7C1D1 291 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 K7ELQ4 463 aaPredicted RBP4.53□□□□□ -1.68
UBR3-202ENST00000392632 RPL13P26373 211 aaKnown RBP4.53□□□□□ -1.68
UBR3-202ENST00000392632 PPP1R2P41236 205 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 FAM193AP78312 1265 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 ZBTB16Q05516 673 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 KIF5AQ12840 1032 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 PRPF4BQ13523 1007 aaKnown RBP4.53□□□□□ -1.68
UBR3-202ENST00000392632 TNFAIP1Q13829 316 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 CFAP58Q5T655 872 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 KRT79Q5XKE5 535 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 C8orf37Q96NL8 207 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 NSRP1Q9H0G5 558 aaKnown RBP4.53□□□□□ -1.68
UBR3-202ENST00000392632 SLC12A5Q9H2X9 1139 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 A0A1W2PRG0 241 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 TRAK2O60296 914 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 STK10O94804 968 aaKnown RBP4.53□□□□□ -1.68
UBR3-202ENST00000392632 GSDMDP57764 484 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 FAM177A1Q8N128 213 aaPredicted RBP4.53□□□□□ -1.68
UBR3-202ENST00000392632 EVI5LQ96CN4 794 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 RBM17Q96I25 401 aaKnown RBP4.53□□□□□ -1.68
UBR3-202ENST00000392632 TRIM6Q9C030 488 aaPredicted RBP4.53□□□□□ -1.68
UBR3-202ENST00000392632 ARHGEF10LQ9HCE6 1279 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 IL1RAPL2Q9NP60 686 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 CCDC87Q9NVE4 849 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 AKNAQ7Z591 1439 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 PALM3A6NDB9 673 aaPredicted RBP4.53□□□□□ -1.68
UBR3-202ENST00000392632 NOP56O00567 594 aaKnown RBP4.53□□□□□ -1.68
UBR3-202ENST00000392632 MX1P20591 662 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 CYLC1P35663 651 aaPredicted RBP4.53□□□□□ -1.68
UBR3-202ENST00000392632 ATP6V1AP38606 617 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 KIF11P52732 1056 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 SMTNP53814 917 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 WTAPQ15007 396 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 ZNF569Q5MCW4 686 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 CCDC102BQ68D86 513 aa4.53□□□□□ -1.68
UBR3-202ENST00000392632 ZNF449Q6P9G9 518 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms