RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 NEK4P51957 841 aa24.28■■□□□ 1.48
PTPN11-202ENST00000392597 RFX7Q2KHR2 1363 aa24.27■■□□□ 1.48
PTPN11-202ENST00000392597 EYA2O00167 538 aa24.27■■□□□ 1.48
PTPN11-202ENST00000392597 RAB3GAP1Q15042 981 aa24.27■■□□□ 1.48
PTPN11-202ENST00000392597 BOLA2Q9H3K6 86 aa24.27■■□□□ 1.48
PTPN11-202ENST00000392597 RREB1Q92766 1687 aa24.27■■□□□ 1.48
PTPN11-202ENST00000392597 CWC22Q9HCG8 908 aaKnown RBP24.26■■□□□ 1.47
PTPN11-202ENST00000392597 NUP98P52948 1817 aa24.26■■□□□ 1.47
PTPN11-202ENST00000392597 MCM4P33991 863 aa24.26■■□□□ 1.47
PTPN11-202ENST00000392597 NLRP10Q86W26 655 aa24.25■■□□□ 1.47
PTPN11-202ENST00000392597 KCNQ2O43526 872 aa24.24■■□□□ 1.47
PTPN11-202ENST00000392597 CSF1RP07333 972 aa24.24■■□□□ 1.47
PTPN11-202ENST00000392597 HLFQ16534 295 aa24.24■■□□□ 1.47
PTPN11-202ENST00000392597 CCDC57Q2TAC2 916 aa24.24■■□□□ 1.47
PTPN11-202ENST00000392597 TICAM2Q86XR7 235 aa24.24■■□□□ 1.47
PTPN11-202ENST00000392597 FSD1Q9BTV5 496 aa24.24■■□□□ 1.47
PTPN11-202ENST00000392597 ARXQ96QS3 562 aa24.23■■□□□ 1.47
PTPN11-202ENST00000392597 DBNDD2Q9BQY9 259 aa24.23■■□□□ 1.47
PTPN11-202ENST00000392597 DZIP3Q86Y13 1208 aaKnown RBP24.22■■□□□ 1.47
PTPN11-202ENST00000392597 SMARCC1Q92922 1105 aaPredicted RBP24.22■■□□□ 1.47
PTPN11-202ENST00000392597 FAM89AQ96GI7 184 aa24.22■■□□□ 1.47
PTPN11-202ENST00000392597 HAUS7Q99871 368 aa24.22■■□□□ 1.47
PTPN11-202ENST00000392597 CCDC87Q9NVE4 849 aa24.22■■□□□ 1.47
PTPN11-202ENST00000392597 ZNF609O15014 1411 aa24.22■■□□□ 1.47
PTPN11-202ENST00000392597 EIF5P55010 431 aaKnown RBP24.21■■□□□ 1.47
PTPN11-202ENST00000392597 KCNB2Q92953 911 aa24.21■■□□□ 1.47
PTPN11-202ENST00000392597 BCL11BQ9C0K0 894 aaPredicted RBP24.21■■□□□ 1.47
PTPN11-202ENST00000392597 FOXD4L1Q9NU39 408 aa24.21■■□□□ 1.47
PTPN11-202ENST00000392597 SNX14Q9Y5W7 946 aa24.21■■□□□ 1.47
PTPN11-202ENST00000392597 ZNF831Q5JPB2 1677 aa24.21■■□□□ 1.47
PTPN11-202ENST00000392597 MYH3P11055 1940 aa24.21■■□□□ 1.47
PTPN11-202ENST00000392597 LOC102724428A0A0B4J2F2 783 aa24.21■■□□□ 1.47
PTPN11-202ENST00000392597 SIK1P57059 783 aa24.21■■□□□ 1.47
PTPN11-202ENST00000392597 NMIQ13287 307 aaPredicted RBP24.21■■□□□ 1.47
PTPN11-202ENST00000392597 BTAF1O14981 1849 aa24.2■■□□□ 1.47
PTPN11-202ENST00000392597 CCDC171Q6TFL3 1326 aa24.2■■□□□ 1.47
PTPN11-202ENST00000392597 DDX11L8A8MPP1 907 aa24.2■■□□□ 1.46
PTPN11-202ENST00000392597 INTS5Q6P9B9 1019 aaKnown RBP24.2■■□□□ 1.46
PTPN11-202ENST00000392597 TNPO1Q92973 898 aaKnown RBP24.2■■□□□ 1.46
PTPN11-202ENST00000392597 ATP6V1AP38606 617 aa24.19■■□□□ 1.46
PTPN11-202ENST00000392597 NUCB2P80303 420 aa24.19■■□□□ 1.46
PTPN11-202ENST00000392597 GSE1Q14687 1217 aa24.19■■□□□ 1.46
PTPN11-202ENST00000392597 LRRC24Q50LG9 513 aa24.19■■□□□ 1.46
PTPN11-202ENST00000392597 GBP4Q96PP9 640 aa24.19■■□□□ 1.46
PTPN11-202ENST00000392597 MED23Q9ULK4 1368 aa24.19■■□□□ 1.46
PTPN11-202ENST00000392597 PALLDQ8WX93 1383 aa24.19■■□□□ 1.46
PTPN11-202ENST00000392597 ZNF594Q96JF6 807 aaPredicted RBP24.19■■□□□ 1.46
PTPN11-202ENST00000392597 TMX3Q96JJ7 454 aa24.19■■□□□ 1.46
PTPN11-202ENST00000392597 FAM227BQ96M60 508 aa24.19■■□□□ 1.46
PTPN11-202ENST00000392597 TRIM37O94972 964 aa24.18■■□□□ 1.46
PTPN11-202ENST00000392597 GPTP24298 496 aa24.18■■□□□ 1.46
PTPN11-202ENST00000392597 CRKLP46109 303 aaKnown RBP24.18■■□□□ 1.46
PTPN11-202ENST00000392597 PTH1RQ03431 593 aa24.18■■□□□ 1.46
PTPN11-202ENST00000392597 IFIT5Q13325 482 aaKnown RBP24.18■■□□□ 1.46
PTPN11-202ENST00000392597 CUL4AQ13619 759 aa24.18■■□□□ 1.46
PTPN11-202ENST00000392597 ZNF34Q8IZ26 560 aa24.18■■□□□ 1.46
PTPN11-202ENST00000392597 CEP126Q9P2H0 1117 aa24.18■■□□□ 1.46
PTPN11-202ENST00000392597 CLEC17AQ6ZS10 378 aa24.17■■□□□ 1.46
PTPN11-202ENST00000392597 PTF1AQ7RTS3 328 aa24.17■■□□□ 1.46
PTPN11-202ENST00000392597 SPEF2Q9C093 1822 aa24.17■■□□□ 1.46
PTPN11-202ENST00000392597 MAP4K1Q92918 833 aa24.17■■□□□ 1.46
PTPN11-202ENST00000392597 INTS4Q96HW7 963 aaKnown RBP24.17■■□□□ 1.46
PTPN11-202ENST00000392597 AK7Q96M32 723 aa24.17■■□□□ 1.46
PTPN11-202ENST00000392597 AKAP2Q9Y2D5 859 aa24.17■■□□□ 1.46
PTPN11-202ENST00000392597 A0A0D9SFI3 127 aa24.16■■□□□ 1.46
PTPN11-202ENST00000392597 CTSWP56202 376 aa24.16■■□□□ 1.46
PTPN11-202ENST00000392597 RASEFQ8IZ41 740 aa24.16■■□□□ 1.46
PTPN11-202ENST00000392597 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.16■■□□□ 1.46
PTPN11-202ENST00000392597 NEUROD6Q96NK8 337 aa24.16■■□□□ 1.46
PTPN11-202ENST00000392597 UPF3BQ9BZI7 483 aaKnown RBP24.16■■□□□ 1.46
PTPN11-202ENST00000392597 TM6SF1Q9BZW5 370 aa24.16■■□□□ 1.46
PTPN11-202ENST00000392597 TBC1D2BQ9UPU7 963 aa24.16■■□□□ 1.46
PTPN11-202ENST00000392597 PTMSP20962 102 aa24.15■■□□□ 1.46
PTPN11-202ENST00000392597 NECTIN1Q15223 517 aa24.15■■□□□ 1.46
PTPN11-202ENST00000392597 TTLL11Q8NHH1 800 aa24.15■■□□□ 1.46
PTPN11-202ENST00000392597 PUS3Q9BZE2 481 aaKnown RBP24.15■■□□□ 1.46
PTPN11-202ENST00000392597 TRMT112Q9UI30 125 aaKnown RBP24.15■■□□□ 1.46
PTPN11-202ENST00000392597 IRS4O14654 1257 aaPredicted RBP24.15■■□□□ 1.46
PTPN11-202ENST00000392597 TAF7LQ5H9L4 462 aa24.15■■□□□ 1.46
PTPN11-202ENST00000392597 COL5A3P25940 1745 aaPredicted RBP24.15■■□□□ 1.46
PTPN11-202ENST00000392597 TNS1Q9HBL0 1735 aaKnown RBP24.14■■□□□ 1.46
PTPN11-202ENST00000392597 A0A1B0GUL7 405 aa24.14■■□□□ 1.45
PTPN11-202ENST00000392597 PDE8AO60658 829 aa24.14■■□□□ 1.45
PTPN11-202ENST00000392597 CYP2E1P05181 493 aaPredicted RBP24.14■■□□□ 1.45
PTPN11-202ENST00000392597 ITPK1Q13572 414 aa24.14■■□□□ 1.45
PTPN11-202ENST00000392597 KBTBD3Q8NAB2 608 aa24.14■■□□□ 1.45
PTPN11-202ENST00000392597 TTC14Q96N46 770 aa24.14■■□□□ 1.45
PTPN11-202ENST00000392597 MYH14Q7Z406 1995 aaKnown RBP24.14■■□□□ 1.45
PTPN11-202ENST00000392597 ZKSCAN1P17029 563 aaPredicted RBP24.13■■□□□ 1.45
PTPN11-202ENST00000392597 TIMM10P62072 90 aa24.13■■□□□ 1.45
PTPN11-202ENST00000392597 DNAJC2Q99543 621 aaKnown RBP24.13■■□□□ 1.45
PTPN11-202ENST00000392597 RBM8AQ9Y5S9 174 aaKnown RBP24.13■■□□□ 1.45
PTPN11-202ENST00000392597 UBN2Q6ZU65 1347 aa24.13■■□□□ 1.45
PTPN11-202ENST00000392597 EDC3Q96F86 508 aaKnown RBP24.13■■□□□ 1.45
PTPN11-202ENST00000392597 PRPF40BQ6NWY9 871 aaKnown RBP24.12■■□□□ 1.45
PTPN11-202ENST00000392597 ANKRD18BA2A2Z9 1011 aa24.11■■□□□ 1.45
PTPN11-202ENST00000392597 SSFA2P28290 1259 aa24.11■■□□□ 1.45
PTPN11-202ENST00000392597 PARP10Q53GL7 1025 aa24.11■■□□□ 1.45
PTPN11-202ENST00000392597 SYNE4Q8N205 404 aa24.11■■□□□ 1.45
PTPN11-202ENST00000392597 ZGPATQ8N5A5 531 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms