RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 H7C1W4 665 aa12.92□□□□□ -0.34
NLRP3-205ENST00000391827 CPA1P15085 419 aa12.92□□□□□ -0.34
NLRP3-205ENST00000391827 ANKRD1Q15327 319 aa12.92□□□□□ -0.34
NLRP3-205ENST00000391827 ABCA3Q99758 1704 aa12.92□□□□□ -0.34
NLRP3-205ENST00000391827 SHANK3Q9BYB0 1731 aa12.92□□□□□ -0.34
NLRP3-205ENST00000391827 A0A087WZG4 1122 aa12.92□□□□□ -0.34
NLRP3-205ENST00000391827 ST3GAL1Q11201 340 aa12.92□□□□□ -0.34
NLRP3-205ENST00000391827 BRINP3Q76B58 766 aa12.92□□□□□ -0.34
NLRP3-205ENST00000391827 TFCP2Q12800 502 aa12.91□□□□□ -0.34
NLRP3-205ENST00000391827 SOS2Q07890 1332 aaPredicted RBP12.91□□□□□ -0.34
NLRP3-205ENST00000391827 NBPF26B4DH59 902 aa12.91□□□□□ -0.34
NLRP3-205ENST00000391827 ME3Q16798 604 aa12.91□□□□□ -0.34
NLRP3-205ENST00000391827 NBPF14Q5TI25 921 aa12.91□□□□□ -0.34
NLRP3-205ENST00000391827 NBPF10Q6P3W6 841 aaKnown RBP12.91□□□□□ -0.34
NLRP3-205ENST00000391827 ZSCAN30Q86W11 494 aa12.91□□□□□ -0.34
NLRP3-205ENST00000391827 NBPF15Q8N660 670 aa12.91□□□□□ -0.34
NLRP3-205ENST00000391827 ZCRB1Q8TBF4 217 aaKnown RBP12.91□□□□□ -0.34
NLRP3-205ENST00000391827 GPR108Q9NPR9 543 aa12.91□□□□□ -0.34
NLRP3-205ENST00000391827 MTMR6Q9Y217 621 aa12.91□□□□□ -0.34
NLRP3-205ENST00000391827 TAF5LO75529 589 aa12.9□□□□□ -0.34
NLRP3-205ENST00000391827 TPM2P07951 284 aa12.9□□□□□ -0.34
NLRP3-205ENST00000391827 GJB2P29033 226 aa12.9□□□□□ -0.34
NLRP3-205ENST00000391827 FOXO4P98177 505 aa12.9□□□□□ -0.34
NLRP3-205ENST00000391827 CCDC83Q8IWF9 413 aa12.9□□□□□ -0.34
NLRP3-205ENST00000391827 HAUS7Q99871 368 aa12.9□□□□□ -0.34
NLRP3-205ENST00000391827 GADD45BO75293 160 aaPredicted RBP12.9□□□□□ -0.34
NLRP3-205ENST00000391827 RPS6KB1P23443 525 aa12.9□□□□□ -0.34
NLRP3-205ENST00000391827 KCNJ4P48050 445 aa12.9□□□□□ -0.34
NLRP3-205ENST00000391827 UBE2HP62256 183 aa12.9□□□□□ -0.34
NLRP3-205ENST00000391827 KRT32Q14532 448 aa12.9□□□□□ -0.34
NLRP3-205ENST00000391827 CSPP1Q1MSJ5 1256 aa12.9□□□□□ -0.34
NLRP3-205ENST00000391827 TPCN1Q9ULQ1 816 aa12.9□□□□□ -0.34
NLRP3-205ENST00000391827 BLOC1S2Q6QNY1 142 aa12.89□□□□□ -0.35
NLRP3-205ENST00000391827 TSPY26PQ9H489 355 aa12.89□□□□□ -0.35
NLRP3-205ENST00000391827 PALLDQ8WX93 1383 aa12.89□□□□□ -0.35
NLRP3-205ENST00000391827 LETM1O95202 739 aaPredicted RBP12.89□□□□□ -0.35
NLRP3-205ENST00000391827 PIP4K2AP48426 406 aaPredicted RBP12.89□□□□□ -0.35
NLRP3-205ENST00000391827 ZNF589Q86UQ0 364 aaPredicted RBP12.89□□□□□ -0.35
NLRP3-205ENST00000391827 CNPY2Q9Y2B0 182 aa12.89□□□□□ -0.35
NLRP3-205ENST00000391827 ATP5J2-PTCD1G3V325 749 aa12.89□□□□□ -0.35
NLRP3-205ENST00000391827 PTCD1O75127 700 aaKnown RBP12.89□□□□□ -0.35
NLRP3-205ENST00000391827 CARD10Q9BWT7 1032 aa12.89□□□□□ -0.35
NLRP3-205ENST00000391827 ATG3Q9NT62 314 aa12.89□□□□□ -0.35
NLRP3-205ENST00000391827 CWC25Q9NXE8 425 aaPredicted RBP12.89□□□□□ -0.35
NLRP3-205ENST00000391827 ZNF609O15014 1411 aa12.88□□□□□ -0.35
NLRP3-205ENST00000391827 SPEF2Q9C093 1822 aa12.88□□□□□ -0.35
NLRP3-205ENST00000391827 CCDC183Q5T5S1 534 aa12.88□□□□□ -0.35
NLRP3-205ENST00000391827 FAM184AQ8NB25 1140 aa12.88□□□□□ -0.35
NLRP3-205ENST00000391827 LARP6Q9BRS8 491 aaKnown RBP12.88□□□□□ -0.35
NLRP3-205ENST00000391827 GDPD2Q9HCC8 539 aa12.88□□□□□ -0.35
NLRP3-205ENST00000391827 PRDM11Q9NQV5 511 aa12.88□□□□□ -0.35
NLRP3-205ENST00000391827 SH3TC1Q8TE82 1336 aa12.88□□□□□ -0.35
NLRP3-205ENST00000391827 LMBR1LQ6UX01 489 aa12.88□□□□□ -0.35
NLRP3-205ENST00000391827 CCDC191Q8NCU4 936 aa12.88□□□□□ -0.35
NLRP3-205ENST00000391827 TCHHQ07283 1943 aa12.87□□□□□ -0.35
NLRP3-205ENST00000391827 PDCP20941 246 aa12.87□□□□□ -0.35
NLRP3-205ENST00000391827 TOB2Q14106 344 aaPredicted RBP12.87□□□□□ -0.35
NLRP3-205ENST00000391827 ATG9AQ7Z3C6 839 aa12.87□□□□□ -0.35
NLRP3-205ENST00000391827 DBNDD2Q9BQY9 259 aa12.87□□□□□ -0.35
NLRP3-205ENST00000391827 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
NLRP3-205ENST00000391827 IL2RBP14784 551 aa12.87□□□□□ -0.35
NLRP3-205ENST00000391827 TOM1L2Q6ZVM7 507 aa12.87□□□□□ -0.35
NLRP3-205ENST00000391827 CIAO1O76071 339 aa12.86□□□□□ -0.35
NLRP3-205ENST00000391827 UVSSAQ2YD98 709 aa12.86□□□□□ -0.35
NLRP3-205ENST00000391827 KBTBD3Q8NAB2 608 aa12.86□□□□□ -0.35
NLRP3-205ENST00000391827 IL15P40933 162 aaPredicted RBP12.86□□□□□ -0.35
NLRP3-205ENST00000391827 MCMDC2Q4G0Z9 681 aa12.86□□□□□ -0.35
NLRP3-205ENST00000391827 JARID2Q92833 1246 aaPredicted RBP12.86□□□□□ -0.35
NLRP3-205ENST00000391827 EDC3Q96F86 508 aaKnown RBP12.86□□□□□ -0.35
NLRP3-205ENST00000391827 NOL7Q9UMY1 257 aaKnown RBP12.86□□□□□ -0.35
NLRP3-205ENST00000391827 TOGARAM1Q9Y4F4 1720 aa12.86□□□□□ -0.35
NLRP3-205ENST00000391827 TTLL7Q6ZT98 887 aa12.85□□□□□ -0.35
NLRP3-205ENST00000391827 MCM5P33992 734 aa12.85□□□□□ -0.35
NLRP3-205ENST00000391827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.85□□□□□ -0.35
NLRP3-205ENST00000391827 TAF6LQ9Y6J9 622 aa12.85□□□□□ -0.35
NLRP3-205ENST00000391827 ELP1O95163 1332 aa12.85□□□□□ -0.35
NLRP3-205ENST00000391827 FOXD4L6Q3SYB3 417 aaPredicted RBP12.85□□□□□ -0.35
NLRP3-205ENST00000391827 FOXD4L3Q6VB84 417 aaPredicted RBP12.85□□□□□ -0.35
NLRP3-205ENST00000391827 NECAB1Q8N987 351 aa12.85□□□□□ -0.35
NLRP3-205ENST00000391827 HELLSQ9NRZ9 838 aa12.85□□□□□ -0.35
NLRP3-205ENST00000391827 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
NLRP3-205ENST00000391827 COL9A3Q14050 684 aaPredicted RBP12.84□□□□□ -0.35
NLRP3-205ENST00000391827 LARP1BQ659C4 914 aaKnown RBP12.84□□□□□ -0.35
NLRP3-205ENST00000391827 NEK1Q96PY6 1258 aa12.84□□□□□ -0.35
NLRP3-205ENST00000391827 ISCA1Q9BUE6 129 aa12.84□□□□□ -0.35
NLRP3-205ENST00000391827 STRCQ7RTU9 1775 aa12.83□□□□□ -0.35
NLRP3-205ENST00000391827 EYA2O00167 538 aa12.83□□□□□ -0.36
NLRP3-205ENST00000391827 DNM1Q05193 864 aaKnown RBP12.83□□□□□ -0.36
NLRP3-205ENST00000391827 TRIM28Q13263 835 aaKnown RBP12.83□□□□□ -0.36
NLRP3-205ENST00000391827 DSCC1Q9BVC3 393 aa12.83□□□□□ -0.36
NLRP3-205ENST00000391827 NHSL1Q5SYE7 1610 aa12.83□□□□□ -0.36
NLRP3-205ENST00000391827 FIBPO43427 364 aa12.83□□□□□ -0.36
NLRP3-205ENST00000391827 ZNF500O60304 480 aaPredicted RBP12.83□□□□□ -0.36
NLRP3-205ENST00000391827 A1BGP04217 495 aa12.83□□□□□ -0.36
NLRP3-205ENST00000391827 HMGB1P09429 215 aaKnown RBP12.83□□□□□ -0.36
NLRP3-205ENST00000391827 MSNP26038 577 aaKnown RBP12.83□□□□□ -0.36
NLRP3-205ENST00000391827 DDX54Q8TDD1 881 aaKnown RBP12.83□□□□□ -0.36
NLRP3-205ENST00000391827 DNAJC2Q99543 621 aaKnown RBP12.83□□□□□ -0.36
NLRP3-205ENST00000391827 SLAIN2Q9P270 581 aa12.83□□□□□ -0.36
NLRP3-205ENST00000391827 GTF3C6Q969F1 213 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms