RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.72□□□□□ -1.97
SNORA40.18-201ENST00000391200 HFM1A2PYH4 1435 aa2.72□□□□□ -1.97
SNORA40.18-201ENST00000391200 SPDYE16A6NNV3 312 aaPredicted RBP2.72□□□□□ -1.97
SNORA40.18-201ENST00000391200 GNB5O14775 395 aa2.72□□□□□ -1.97
SNORA40.18-201ENST00000391200 SLC15A2Q16348 729 aa2.72□□□□□ -1.97
SNORA40.18-201ENST00000391200 MSL1Q68DK7 614 aa2.72□□□□□ -1.97
SNORA40.18-201ENST00000391200 TFCP2L1Q9NZI6 479 aa2.72□□□□□ -1.97
SNORA40.18-201ENST00000391200 OAS3Q9Y6K5 1087 aaKnown RBP2.72□□□□□ -1.97
SNORA40.18-201ENST00000391200 SLIT2O94813 1529 aa2.72□□□□□ -1.97
SNORA40.18-201ENST00000391200 CCDC88AQ3V6T2 1871 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 CEP350Q5VT06 3117 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 RGPD1P0DJD0 1748 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 FMN2Q9NZ56 1722 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 CCDC144AA2RUR9 1427 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 TECPR2O15040 1411 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 DCCP43146 1447 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 PLSCR1O15162 318 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 MX2P20592 715 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 OGFOD2Q6N063 350 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 BARGINQ6ZT62 677 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 NLGN2Q8NFZ4 835 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 SYMPKQ92797 1274 aaKnown RBP2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 GTPBP3Q969Y2 492 aaKnown RBP2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 NUDT12Q9BQG2 462 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 SLC12A5Q9H2X9 1139 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 SBNO1A3KN83 1393 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 ARHGEF10O15013 1369 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 COL22A1Q8NFW1 1626 aaPredicted RBP2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 MYOM2P54296 1465 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 NWD2Q9ULI1 1742 aa2.71□□□□□ -1.98
SNORA40.18-201ENST00000391200 TNS3Q68CZ2 1445 aa2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 RRBP1Q9P2E9 1410 aaKnown RBP2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 RGPD2P0DJD1 1756 aa2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 COL14A1Q05707 1796 aaKnown RBP2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 DDX11L8A8MPP1 907 aa2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 PPM1GO15355 546 aaPredicted RBP2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 BUD31P41223 144 aaPredicted RBP2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 MPRIPQ6WCQ1 1025 aa2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 ARHGAP27Q6ZUM4 889 aa2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 COL23A1Q86Y22 540 aaPredicted RBP2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 PXYLP1Q8TE99 480 aa2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 NLRP7Q8WX94 980 aa2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 KLRG1Q96E93 195 aa2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 POLR3GLQ9BT43 218 aa2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 USP32Q8NFA0 1604 aa2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 ANKRD30BQ9BXX2 1392 aa2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 GOLGB1Q14789 3259 aaKnown RBP2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.7□□□□□ -1.98
SNORA40.18-201ENST00000391200 TNS1Q9HBL0 1735 aaKnown RBP2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 A0A0G2JLW4 131 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 GTPBP6O43824 516 aaPredicted RBP2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 GIGYF1O75420 1035 aaPredicted RBP2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 JUNDP17535 347 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 POLD1P28340 1107 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 AMPHP49418 695 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 DGKGP49619 791 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 HTRA3P83110 453 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 NR5A1Q13285 461 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 CNGB1Q14028 1251 aaPredicted RBP2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 ZNF827Q17R98 1081 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 ARHGEF25Q86VW2 580 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 NME9Q86XW9 330 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 USHBP1Q8N6Y0 703 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 ZNF511Q8NB15 262 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 RNF217Q8TC41 542 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 ANKRD24Q8TF21 1146 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 FOXJ1Q92949 421 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 L3MBTL2Q969R5 705 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 TRIM11Q96F44 468 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 AGBL1Q96MI9 1066 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 INSM2Q96T92 566 aaPredicted RBP2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 CARD10Q9BWT7 1032 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 MTFR1LQ9H019 292 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 UNC93B1Q9H1C4 597 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 THRAP3Q9Y2W1 955 aaKnown RBP2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 NRXN1Q9ULB1 1477 aa2.69□□□□□ -1.98
SNORA40.18-201ENST00000391200 TTC21BQ7Z4L5 1316 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 UTRNP46939 3433 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 LAMC1P11047 1609 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 TRPM3Q9HCF6 1732 aaPredicted RBP2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 SPTLC1O15269 473 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 IL2RBP14784 551 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 TNNT2P45379 298 aaPredicted RBP2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 PTGDRQ13258 359 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 ZCRB1Q8TBF4 217 aaKnown RBP2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 BTBD6Q96KE9 485 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 GPBP1L1Q9HC44 474 aaPredicted RBP2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 KIF1AQ12756 1690 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 ALS2Q96Q42 1657 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 AKAP12Q02952 1782 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 NUP188Q5SRE5 1749 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 NRAPQ86VF7 1730 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 ABCA3Q99758 1704 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 SPATA31E1Q6ZUB1 1445 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 SSH2Q76I76 1423 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 NCANO14594 1321 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 EVC2Q86UK5 1308 aa2.68□□□□□ -1.98
SNORA40.18-201ENST00000391200 KTN1Q86UP2 1357 aaKnown RBP2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 RAB3GAP2Q9H2M9 1393 aa2.67□□□□□ -1.98
SNORA40.18-201ENST00000391200 PRRG2O14669 202 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms