RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 FGD1P98174 961 aa24.88■■□□□ 1.57
COL23A1-201ENST00000390654 ARHGAP23Q9P227 1491 aa24.88■■□□□ 1.57
COL23A1-201ENST00000390654 ATP5J2-PTCD1G3V325 749 aa24.88■■□□□ 1.57
COL23A1-201ENST00000390654 PTCD1O75127 700 aaKnown RBP24.88■■□□□ 1.57
COL23A1-201ENST00000390654 CHRNA2Q15822 529 aa24.88■■□□□ 1.57
COL23A1-201ENST00000390654 FAM200AQ8TCP9 573 aa24.88■■□□□ 1.57
COL23A1-201ENST00000390654 TRIM5Q9C035 493 aa24.88■■□□□ 1.57
COL23A1-201ENST00000390654 DNAJC25Q9H1X3 360 aa24.88■■□□□ 1.57
COL23A1-201ENST00000390654 KIF3AQ9Y496 699 aa24.88■■□□□ 1.57
COL23A1-201ENST00000390654 RNF20Q5VTR2 975 aa24.87■■□□□ 1.57
COL23A1-201ENST00000390654 FTOQ9C0B1 505 aaKnown RBP eCLIP24.87■■□□□ 1.57
COL23A1-201ENST00000390654 CBX8Q9HC52 389 aa24.87■■□□□ 1.57
COL23A1-201ENST00000390654 RIOK3O14730 519 aaKnown RBP24.87■■□□□ 1.57
COL23A1-201ENST00000390654 COPS6Q7L5N1 327 aa24.87■■□□□ 1.57
COL23A1-201ENST00000390654 XAGE3Q8WTP9 111 aa24.87■■□□□ 1.57
COL23A1-201ENST00000390654 TAOK2Q9UL54 1235 aa24.87■■□□□ 1.57
COL23A1-201ENST00000390654 DDX46Q7L014 1031 aaKnown RBP24.86■■□□□ 1.57
COL23A1-201ENST00000390654 LEO1Q8WVC0 666 aaPredicted RBP24.86■■□□□ 1.57
COL23A1-201ENST00000390654 SLIT1O75093 1534 aa24.86■■□□□ 1.57
COL23A1-201ENST00000390654 PRIMPOLQ96LW4 560 aa24.86■■□□□ 1.57
COL23A1-201ENST00000390654 C16orf45Q96MC5 204 aaPredicted RBP24.86■■□□□ 1.57
COL23A1-201ENST00000390654 BCL2L12Q9HB09 334 aa24.86■■□□□ 1.57
COL23A1-201ENST00000390654 ARHGEF25Q86VW2 580 aa24.85■■□□□ 1.57
COL23A1-201ENST00000390654 KCNB2Q92953 911 aa24.85■■□□□ 1.57
COL23A1-201ENST00000390654 BRF1Q92994 677 aa24.85■■□□□ 1.57
COL23A1-201ENST00000390654 SPDYE4A6NLX3 237 aa24.85■■□□□ 1.57
COL23A1-201ENST00000390654 DDX58O95786 925 aaKnown RBP24.85■■□□□ 1.57
COL23A1-201ENST00000390654 ANKARQ7Z5J8 1434 aa24.85■■□□□ 1.57
COL23A1-201ENST00000390654 H3BQV1 296 aa24.84■■□□□ 1.57
COL23A1-201ENST00000390654 HMGN5P82970 282 aaKnown RBP24.84■■□□□ 1.57
COL23A1-201ENST00000390654 IFFO2Q5TF58 517 aa24.84■■□□□ 1.57
COL23A1-201ENST00000390654 ERCC4Q92889 916 aaPredicted RBP24.84■■□□□ 1.57
COL23A1-201ENST00000390654 SPTLC3Q9NUV7 552 aa24.84■■□□□ 1.57
COL23A1-201ENST00000390654 TFCP2Q12800 502 aa24.84■■□□□ 1.57
COL23A1-201ENST00000390654 KRT28Q7Z3Y7 464 aa24.84■■□□□ 1.57
COL23A1-201ENST00000390654 PGBD1Q96JS3 809 aa24.84■■□□□ 1.57
COL23A1-201ENST00000390654 PDCP20941 246 aa24.84■■□□□ 1.57
COL23A1-201ENST00000390654 Q6ZUG5 572 aa24.84■■□□□ 1.57
COL23A1-201ENST00000390654 DBNLQ9UJU6 430 aaKnown RBP24.84■■□□□ 1.57
COL23A1-201ENST00000390654 RGPD2P0DJD1 1756 aa24.84■■□□□ 1.57
COL23A1-201ENST00000390654 TAF5LO75529 589 aa24.83■■□□□ 1.57
COL23A1-201ENST00000390654 PPP4R3BQ5MIZ7 849 aa24.83■■□□□ 1.57
COL23A1-201ENST00000390654 GUCY1B3Q02153 619 aa24.83■■□□□ 1.57
COL23A1-201ENST00000390654 PDIA6Q15084 440 aa24.83■■□□□ 1.57
COL23A1-201ENST00000390654 AMOTQ4VCS5 1084 aa24.82■■□□□ 1.56
COL23A1-201ENST00000390654 UBE3BQ7Z3V4 1068 aa24.82■■□□□ 1.56
COL23A1-201ENST00000390654 RAPGEF4Q8WZA2 1011 aa24.82■■□□□ 1.56
COL23A1-201ENST00000390654 DDX21Q9NR30 783 aaKnown RBP eCLIP24.82■■□□□ 1.56
COL23A1-201ENST00000390654 GOLGA6L6A8MZA4 724 aa24.82■■□□□ 1.56
COL23A1-201ENST00000390654 HIP1O00291 1037 aa24.82■■□□□ 1.56
COL23A1-201ENST00000390654 NEXNQ0ZGT2 675 aa24.82■■□□□ 1.56
COL23A1-201ENST00000390654 PROSER2Q86WR7 435 aaPredicted RBP24.82■■□□□ 1.56
COL23A1-201ENST00000390654 CHMP4AQ9BY43 222 aa24.82■■□□□ 1.56
COL23A1-201ENST00000390654 CHST3Q7LGC8 479 aa24.82■■□□□ 1.56
COL23A1-201ENST00000390654 DBNDD2Q9BQY9 259 aa24.82■■□□□ 1.56
COL23A1-201ENST00000390654 USP16Q9Y5T5 823 aa24.82■■□□□ 1.56
COL23A1-201ENST00000390654 NPHP4O75161 1426 aaPredicted RBP24.82■■□□□ 1.56
COL23A1-201ENST00000390654 COL15A1P39059 1388 aa24.81■■□□□ 1.56
COL23A1-201ENST00000390654 ZNF165P49910 485 aa24.81■■□□□ 1.56
COL23A1-201ENST00000390654 CCT2P78371 535 aaKnown RBP24.81■■□□□ 1.56
COL23A1-201ENST00000390654 CHAF1AQ13111 956 aaPredicted RBP24.81■■□□□ 1.56
COL23A1-201ENST00000390654 SCAND2PQ9GZW5 306 aaPredicted RBP24.81■■□□□ 1.56
COL23A1-201ENST00000390654 LTN1O94822 1766 aa24.8■■□□□ 1.56
COL23A1-201ENST00000390654 A0A0G2JLW4 131 aa24.8■■□□□ 1.56
COL23A1-201ENST00000390654 NEURL1BA8MQ27 555 aa24.8■■□□□ 1.56
COL23A1-201ENST00000390654 NEK1Q96PY6 1258 aa24.8■■□□□ 1.56
COL23A1-201ENST00000390654 ANKRD1Q15327 319 aa24.8■■□□□ 1.56
COL23A1-201ENST00000390654 ZNF496Q96IT1 587 aaPredicted RBP24.8■■□□□ 1.56
COL23A1-201ENST00000390654 CCDC94Q9BW85 323 aaPredicted RBP24.8■■□□□ 1.56
COL23A1-201ENST00000390654 GCKRQ14397 625 aa24.8■■□□□ 1.56
COL23A1-201ENST00000390654 MTERF4Q7Z6M4 381 aaKnown RBP24.8■■□□□ 1.56
COL23A1-201ENST00000390654 CYP21A2P08686 494 aa24.79■■□□□ 1.56
COL23A1-201ENST00000390654 ATP2B3Q16720 1220 aa24.79■■□□□ 1.56
COL23A1-201ENST00000390654 ZNF592Q92610 1267 aa24.79■■□□□ 1.56
COL23A1-201ENST00000390654 NEUROD6Q96NK8 337 aa24.79■■□□□ 1.56
COL23A1-201ENST00000390654 ZHX1Q9UKY1 873 aaPredicted RBP24.79■■□□□ 1.56
COL23A1-201ENST00000390654 ARID5BQ14865 1188 aa24.78■■□□□ 1.56
COL23A1-201ENST00000390654 ZNF790Q6PG37 636 aa24.78■■□□□ 1.56
COL23A1-201ENST00000390654 ZNF330Q9Y3S2 320 aaPredicted RBP24.78■■□□□ 1.56
COL23A1-201ENST00000390654 NAA30Q147X3 362 aaPredicted RBP24.78■■□□□ 1.56
COL23A1-201ENST00000390654 HDAC5Q9UQL6 1122 aa24.78■■□□□ 1.56
COL23A1-201ENST00000390654 NPHP3Q7Z494 1330 aa24.78■■□□□ 1.56
COL23A1-201ENST00000390654 NCOA5Q9HCD5 579 aaKnown RBP24.77■■□□□ 1.56
COL23A1-201ENST00000390654 MARF1Q9Y4F3 1742 aaKnown RBP24.77■■□□□ 1.56
COL23A1-201ENST00000390654 MED23Q9ULK4 1368 aa24.76■■□□□ 1.55
COL23A1-201ENST00000390654 GTF3C6Q969F1 213 aa24.76■■□□□ 1.55
COL23A1-201ENST00000390654 SCRN1Q12765 414 aa24.76■■□□□ 1.55
COL23A1-201ENST00000390654 TNNI3KQ59H18 835 aa24.76■■□□□ 1.55
COL23A1-201ENST00000390654 CLSTN2Q9H4D0 955 aa24.76■■□□□ 1.55
COL23A1-201ENST00000390654 FPGT-TNNI3KV9GXZ4 949 aa24.76■■□□□ 1.55
COL23A1-201ENST00000390654 IGSF3O75054 1194 aa24.75■■□□□ 1.55
COL23A1-201ENST00000390654 APOBRQ0VD83 1088 aa24.75■■□□□ 1.55
COL23A1-201ENST00000390654 CCDC144BQ3MJ40 725 aa24.75■■□□□ 1.55
COL23A1-201ENST00000390654 CCDC144CPQ8IYA2 1237 aa24.75■■□□□ 1.55
COL23A1-201ENST00000390654 FER1L4A9Z1Z3 1794 aa24.75■■□□□ 1.55
COL23A1-201ENST00000390654 CLIP2Q9UDT6 1046 aa24.75■■□□□ 1.55
COL23A1-201ENST00000390654 U2AF2P26368 475 aaKnown RBP eCLIP24.75■■□□□ 1.55
COL23A1-201ENST00000390654 ELP1O95163 1332 aa24.75■■□□□ 1.55
COL23A1-201ENST00000390654 ZNF75DP51815 510 aa24.74■■□□□ 1.55
COL23A1-201ENST00000390654 PTPN12Q05209 780 aaKnown RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms