RNA–Protein interactions for RNA: ENST00000390619.2

IGHV4-39-201, Transcript of immunoglobulin heavy variable 4-39, humanhuman

APPRIS P1 BASIC

Gene IGHV4-39, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-39-201ENST00000390619 RTL9Q8NET4 1388 aa17.84■□□□□ 0.45
IGHV4-39-201ENST00000390619 MTX1Q13505 466 aa17.83■□□□□ 0.44
IGHV4-39-201ENST00000390619 CEP85Q6P2H3 762 aa17.83■□□□□ 0.44
IGHV4-39-201ENST00000390619 C3orf67Q6ZVT6 689 aa17.83■□□□□ 0.44
IGHV4-39-201ENST00000390619 BRIP1Q9BX63 1249 aa17.83■□□□□ 0.44
IGHV4-39-201ENST00000390619 ARFGEF1Q9Y6D6 1849 aa17.83■□□□□ 0.44
IGHV4-39-201ENST00000390619 SLX4Q8IY92 1834 aa17.82■□□□□ 0.44
IGHV4-39-201ENST00000390619 NLRP3Q96P20 1036 aa17.82■□□□□ 0.44
IGHV4-39-201ENST00000390619 CSF1RP07333 972 aa17.81■□□□□ 0.44
IGHV4-39-201ENST00000390619 SF3B3Q15393 1217 aaKnown RBP17.81■□□□□ 0.44
IGHV4-39-201ENST00000390619 ERICH6BQ5W0A0 696 aa17.81■□□□□ 0.44
IGHV4-39-201ENST00000390619 LMBR1LQ6UX01 489 aa17.81■□□□□ 0.44
IGHV4-39-201ENST00000390619 TTLL11Q8NHH1 800 aa17.81■□□□□ 0.44
IGHV4-39-201ENST00000390619 KLRG2A4D1S0 409 aaPredicted RBP17.8■□□□□ 0.44
IGHV4-39-201ENST00000390619 PDE6BP35913 854 aa17.8■□□□□ 0.44
IGHV4-39-201ENST00000390619 FAM161AQ3B820 660 aa17.8■□□□□ 0.44
IGHV4-39-201ENST00000390619 CRY2Q49AN0 593 aa17.8■□□□□ 0.44
IGHV4-39-201ENST00000390619 CCDC152Q4G0S7 254 aa17.8■□□□□ 0.44
IGHV4-39-201ENST00000390619 RPAP2Q8IXW5 612 aaPredicted RBP17.8■□□□□ 0.44
IGHV4-39-201ENST00000390619 CHMP3Q9Y3E7 222 aa17.8■□□□□ 0.44
IGHV4-39-201ENST00000390619 PCDHB15Q9Y5E8 787 aa17.8■□□□□ 0.44
IGHV4-39-201ENST00000390619 ATP8B2P98198 1209 aa17.79■□□□□ 0.44
IGHV4-39-201ENST00000390619 GREM2Q9H772 168 aa17.79■□□□□ 0.44
IGHV4-39-201ENST00000390619 PNMA6EA0A0J9YXQ4 647 aa17.78■□□□□ 0.44
IGHV4-39-201ENST00000390619 SRGAP3O43295 1099 aa17.78■□□□□ 0.44
IGHV4-39-201ENST00000390619 CCDC85AQ96PX6 553 aaPredicted RBP17.78■□□□□ 0.44
IGHV4-39-201ENST00000390619 PDZRN3Q9UPQ7 1066 aa17.78■□□□□ 0.44
IGHV4-39-201ENST00000390619 LTBP1Q14766 1721 aa17.78■□□□□ 0.44
IGHV4-39-201ENST00000390619 ARAP2Q8WZ64 1704 aa17.78■□□□□ 0.44
IGHV4-39-201ENST00000390619 POLA2Q14181 598 aa17.77■□□□□ 0.44
IGHV4-39-201ENST00000390619 SIRT2Q8IXJ6 389 aa17.77■□□□□ 0.44
IGHV4-39-201ENST00000390619 SSH3Q8TE77 659 aa17.77■□□□□ 0.44
IGHV4-39-201ENST00000390619 RPGRQ92834 1020 aaKnown RBP17.77■□□□□ 0.44
IGHV4-39-201ENST00000390619 HMMRO75330 724 aa17.76■□□□□ 0.43
IGHV4-39-201ENST00000390619 SRGNP10124 158 aa17.76■□□□□ 0.43
IGHV4-39-201ENST00000390619 ITGA6P23229 1130 aa17.76■□□□□ 0.43
IGHV4-39-201ENST00000390619 RFX5P48382 616 aaPredicted RBP17.76■□□□□ 0.43
IGHV4-39-201ENST00000390619 IFIT5Q13325 482 aaKnown RBP17.76■□□□□ 0.43
IGHV4-39-201ENST00000390619 C2CD5Q86YS7 1000 aa17.76■□□□□ 0.43
IGHV4-39-201ENST00000390619 CD2APQ9Y5K6 639 aa17.76■□□□□ 0.43
IGHV4-39-201ENST00000390619 ANKRD18BA2A2Z9 1011 aa17.75■□□□□ 0.43
IGHV4-39-201ENST00000390619 HOXA10P31260 410 aaPredicted RBP17.75■□□□□ 0.43
IGHV4-39-201ENST00000390619 CCDC57Q2TAC2 916 aa17.75■□□□□ 0.43
IGHV4-39-201ENST00000390619 DDX46Q7L014 1031 aaKnown RBP17.75■□□□□ 0.43
IGHV4-39-201ENST00000390619 MYH13Q9UKX3 1938 aa17.74■□□□□ 0.43
IGHV4-39-201ENST00000390619 FER1L6Q2WGJ9 1857 aa17.74■□□□□ 0.43
IGHV4-39-201ENST00000390619 H0YIN7 160 aa17.74■□□□□ 0.43
IGHV4-39-201ENST00000390619 NPR1P16066 1061 aa17.74■□□□□ 0.43
IGHV4-39-201ENST00000390619 HDAC1Q13547 482 aaPredicted RBP17.74■□□□□ 0.43
IGHV4-39-201ENST00000390619 STYK1Q6J9G0 422 aa17.74■□□□□ 0.43
IGHV4-39-201ENST00000390619 MASTLQ96GX5 879 aa17.74■□□□□ 0.43
IGHV4-39-201ENST00000390619 RBM17Q96I25 401 aaKnown RBP17.74■□□□□ 0.43
IGHV4-39-201ENST00000390619 CDC5LQ99459 802 aaKnown RBP17.74■□□□□ 0.43
IGHV4-39-201ENST00000390619 SEC31BQ9NQW1 1179 aa17.74■□□□□ 0.43
IGHV4-39-201ENST00000390619 CHRNA5P30532 468 aa17.73■□□□□ 0.43
IGHV4-39-201ENST00000390619 TGFB2P61812 414 aa17.73■□□□□ 0.43
IGHV4-39-201ENST00000390619 GRAPQ13588 217 aa17.73■□□□□ 0.43
IGHV4-39-201ENST00000390619 KLHL34Q8N239 644 aa17.73■□□□□ 0.43
IGHV4-39-201ENST00000390619 GRAPLQ8TC17 118 aaPredicted RBP17.73■□□□□ 0.43
IGHV4-39-201ENST00000390619 CRAMP1Q96RY5 1269 aa17.73■□□□□ 0.43
IGHV4-39-201ENST00000390619 COPRSQ9NQ92 184 aa17.73■□□□□ 0.43
IGHV4-39-201ENST00000390619 PTPN12Q05209 780 aaKnown RBP17.72■□□□□ 0.43
IGHV4-39-201ENST00000390619 TAF7LQ5H9L4 462 aa17.72■□□□□ 0.43
IGHV4-39-201ENST00000390619 CELF1Q92879 486 aaKnown RBP17.72■□□□□ 0.43
IGHV4-39-201ENST00000390619 ZNF594Q96JF6 807 aaPredicted RBP17.72■□□□□ 0.43
IGHV4-39-201ENST00000390619 CCDC88AQ3V6T2 1871 aa17.71■□□□□ 0.43
IGHV4-39-201ENST00000390619 DPEP1P16444 411 aa17.71■□□□□ 0.43
IGHV4-39-201ENST00000390619 ANKRD18AQ8IVF6 992 aa17.71■□□□□ 0.43
IGHV4-39-201ENST00000390619 KLHDC4Q8TBB5 520 aa17.71■□□□□ 0.43
IGHV4-39-201ENST00000390619 PPP4R2Q9NY27 417 aa17.71■□□□□ 0.43
IGHV4-39-201ENST00000390619 PPP1R1BQ9UD71 204 aaPredicted RBP17.71■□□□□ 0.43
IGHV4-39-201ENST00000390619 PA2G4Q9UQ80 394 aaKnown RBP17.71■□□□□ 0.43
IGHV4-39-201ENST00000390619 IGHMBP2P38935 993 aaKnown RBP17.7■□□□□ 0.42
IGHV4-39-201ENST00000390619 ZNF622Q969S3 477 aaKnown RBP eCLIP17.7■□□□□ 0.42
IGHV4-39-201ENST00000390619 RWDD1Q9H446 243 aaPredicted RBP17.7■□□□□ 0.42
IGHV4-39-201ENST00000390619 NOP58Q9Y2X3 529 aaKnown RBP17.7■□□□□ 0.42
IGHV4-39-201ENST00000390619 ALDH1B1P30837 517 aa17.69■□□□□ 0.42
IGHV4-39-201ENST00000390619 CNKSR1Q969H4 720 aa17.69■□□□□ 0.42
IGHV4-39-201ENST00000390619 FHDC1Q9C0D6 1143 aaPredicted RBP17.69■□□□□ 0.42
IGHV4-39-201ENST00000390619 FBXO3Q9UK99 471 aa17.69■□□□□ 0.42
IGHV4-39-201ENST00000390619 A0A0G2JLW4 131 aa17.68■□□□□ 0.42
IGHV4-39-201ENST00000390619 EYA2O00167 538 aa17.68■□□□□ 0.42
IGHV4-39-201ENST00000390619 SURF6O75683 361 aaKnown RBP17.68■□□□□ 0.42
IGHV4-39-201ENST00000390619 CIAO1O76071 339 aa17.68■□□□□ 0.42
IGHV4-39-201ENST00000390619 KCNA3P22001 575 aa17.68■□□□□ 0.42
IGHV4-39-201ENST00000390619 RPS8P62241 208 aaKnown RBP17.68■□□□□ 0.42
IGHV4-39-201ENST00000390619 TMC4Q7Z404 712 aa17.68■□□□□ 0.42
IGHV4-39-201ENST00000390619 NLGN2Q8NFZ4 835 aa17.68■□□□□ 0.42
IGHV4-39-201ENST00000390619 MPHOSPH8Q99549 860 aa17.68■□□□□ 0.42
IGHV4-39-201ENST00000390619 SIL1Q9H173 461 aa17.68■□□□□ 0.42
IGHV4-39-201ENST00000390619 DCTPP1Q9H773 170 aa17.68■□□□□ 0.42
IGHV4-39-201ENST00000390619 DUOX1Q9NRD9 1551 aa17.68■□□□□ 0.42
IGHV4-39-201ENST00000390619 EXOC6BQ9Y2D4 811 aa17.68■□□□□ 0.42
IGHV4-39-201ENST00000390619 PPEF1O14829 653 aaPredicted RBP17.67■□□□□ 0.42
IGHV4-39-201ENST00000390619 IGHDP01880 384 aa17.67■□□□□ 0.42
IGHV4-39-201ENST00000390619 PRPF40BQ6NWY9 871 aaKnown RBP17.67■□□□□ 0.42
IGHV4-39-201ENST00000390619 LDHAL6AQ6ZMR3 332 aa17.67■□□□□ 0.42
IGHV4-39-201ENST00000390619 CCDC136Q96JN2 1154 aa17.67■□□□□ 0.42
IGHV4-39-201ENST00000390619 PUS3Q9BZE2 481 aaKnown RBP17.67■□□□□ 0.42
IGHV4-39-201ENST00000390619 CNNM1Q9NRU3 951 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms