RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 DNAJC5GQ8N7S2 189 aa10.37□□□□□ -0.75
TRAV6-201ENST00000390428 TATDN2Q93075 761 aa10.37□□□□□ -0.75
TRAV6-201ENST00000390428 NPC1L1Q9UHC9 1359 aa10.37□□□□□ -0.75
TRAV6-201ENST00000390428 DICER1Q9UPY3 1922 aaKnown RBP10.37□□□□□ -0.75
TRAV6-201ENST00000390428 STARD3NLO95772 234 aa10.36□□□□□ -0.75
TRAV6-201ENST00000390428 BCAMP50895 628 aa10.36□□□□□ -0.75
TRAV6-201ENST00000390428 EIF5P55010 431 aaKnown RBP10.36□□□□□ -0.75
TRAV6-201ENST00000390428 RASSF7Q02833 373 aa10.36□□□□□ -0.75
TRAV6-201ENST00000390428 PADI6Q6TGC4 694 aa10.36□□□□□ -0.75
TRAV6-201ENST00000390428 TTC5Q8N0Z6 440 aa10.36□□□□□ -0.75
TRAV6-201ENST00000390428 IL17REQ8NFR9 667 aa10.36□□□□□ -0.75
TRAV6-201ENST00000390428 GAS2L2Q8NHY3 880 aa10.36□□□□□ -0.75
TRAV6-201ENST00000390428 RRAGCQ9HB90 399 aa10.36□□□□□ -0.75
TRAV6-201ENST00000390428 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
TRAV6-201ENST00000390428 SCN7AQ01118 1682 aa10.36□□□□□ -0.75
TRAV6-201ENST00000390428 A0A087WZG4 1122 aa10.35□□□□□ -0.75
TRAV6-201ENST00000390428 GNAT3A8MTJ3 354 aa10.35□□□□□ -0.75
TRAV6-201ENST00000390428 U2SURPO15042 1029 aaKnown RBP10.35□□□□□ -0.75
TRAV6-201ENST00000390428 TEFQ10587 303 aa10.35□□□□□ -0.75
TRAV6-201ENST00000390428 FSTL1Q12841 308 aa10.35□□□□□ -0.75
TRAV6-201ENST00000390428 PTGDRQ13258 359 aa10.35□□□□□ -0.75
TRAV6-201ENST00000390428 ZNF790Q6PG37 636 aa10.35□□□□□ -0.75
TRAV6-201ENST00000390428 C2CD5Q86YS7 1000 aa10.35□□□□□ -0.75
TRAV6-201ENST00000390428 TTLL6Q8N841 843 aa10.35□□□□□ -0.75
TRAV6-201ENST00000390428 ZNF496Q96IT1 587 aaPredicted RBP10.35□□□□□ -0.75
TRAV6-201ENST00000390428 CACNA1SQ13698 1873 aa10.35□□□□□ -0.75
TRAV6-201ENST00000390428 FER1L6Q2WGJ9 1857 aa10.35□□□□□ -0.75
TRAV6-201ENST00000390428 CARMIL3Q8ND23 1372 aa10.35□□□□□ -0.75
TRAV6-201ENST00000390428 HEG1Q9ULI3 1381 aa10.35□□□□□ -0.75
TRAV6-201ENST00000390428 TIAM2Q8IVF5 1701 aa10.35□□□□□ -0.75
TRAV6-201ENST00000390428 ZC3H4Q9UPT8 1303 aaKnown RBP10.34□□□□□ -0.75
TRAV6-201ENST00000390428 NBPF26B4DH59 902 aa10.34□□□□□ -0.75
TRAV6-201ENST00000390428 LMNB1P20700 586 aa10.34□□□□□ -0.75
TRAV6-201ENST00000390428 PRELPP51888 382 aa10.34□□□□□ -0.75
TRAV6-201ENST00000390428 CNGB1Q14028 1251 aaPredicted RBP10.34□□□□□ -0.75
TRAV6-201ENST00000390428 TBC1D9BQ66K14 1250 aa10.34□□□□□ -0.75
TRAV6-201ENST00000390428 BICDL1Q6ZP65 573 aa10.34□□□□□ -0.75
TRAV6-201ENST00000390428 TEX13AQ9BXU3 409 aaPredicted RBP10.34□□□□□ -0.75
TRAV6-201ENST00000390428 PLA2G2EQ9NZK7 142 aa10.34□□□□□ -0.75
TRAV6-201ENST00000390428 COL11A2P13942 1736 aaPredicted RBP10.33□□□□□ -0.76
TRAV6-201ENST00000390428 H0YIN7 160 aa10.33□□□□□ -0.76
TRAV6-201ENST00000390428 IL6STP40189 918 aaPredicted RBP10.33□□□□□ -0.76
TRAV6-201ENST00000390428 HTRA3P83110 453 aa10.33□□□□□ -0.76
TRAV6-201ENST00000390428 NUDT18Q6ZVK8 323 aa10.33□□□□□ -0.76
TRAV6-201ENST00000390428 CEMIPQ8WUJ3 1361 aa10.33□□□□□ -0.76
TRAV6-201ENST00000390428 BCORQ6W2J9 1755 aa10.33□□□□□ -0.76
TRAV6-201ENST00000390428 GLTPD2A6NH11 291 aa10.32□□□□□ -0.76
TRAV6-201ENST00000390428 NFKBIEO00221 500 aa10.32□□□□□ -0.76
TRAV6-201ENST00000390428 SMC1BQ8NDV3 1235 aa10.32□□□□□ -0.76
TRAV6-201ENST00000390428 KLRG1Q96E93 195 aa10.32□□□□□ -0.76
TRAV6-201ENST00000390428 FMNL2Q96PY5 1086 aa10.32□□□□□ -0.76
TRAV6-201ENST00000390428 TBC1D2BQ9UPU7 963 aa10.32□□□□□ -0.76
TRAV6-201ENST00000390428 ZNF330Q9Y3S2 320 aaPredicted RBP10.32□□□□□ -0.76
TRAV6-201ENST00000390428 SLX4Q8IY92 1834 aa10.32□□□□□ -0.76
TRAV6-201ENST00000390428 ARFGEF2Q9Y6D5 1785 aa10.31□□□□□ -0.76
TRAV6-201ENST00000390428 KCNQ3O43525 872 aa10.31□□□□□ -0.76
TRAV6-201ENST00000390428 A1BGP04217 495 aa10.31□□□□□ -0.76
TRAV6-201ENST00000390428 PRKAR2BP31323 418 aa10.31□□□□□ -0.76
TRAV6-201ENST00000390428 PDE6BP35913 854 aa10.31□□□□□ -0.76
TRAV6-201ENST00000390428 RBM26Q5T8P6 1007 aaKnown RBP10.31□□□□□ -0.76
TRAV6-201ENST00000390428 PRR5LQ6MZQ0 368 aa10.31□□□□□ -0.76
TRAV6-201ENST00000390428 ZNF622Q969S3 477 aaKnown RBP eCLIP10.31□□□□□ -0.76
TRAV6-201ENST00000390428 PHACTR3Q96KR7 559 aa10.31□□□□□ -0.76
TRAV6-201ENST00000390428 BRIP1Q9BX63 1249 aa10.31□□□□□ -0.76
TRAV6-201ENST00000390428 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.31□□□□□ -0.76
TRAV6-201ENST00000390428 PDZRN3Q9UPQ7 1066 aa10.31□□□□□ -0.76
TRAV6-201ENST00000390428 BTBD11A6QL63 1104 aa10.3□□□□□ -0.76
TRAV6-201ENST00000390428 CAMTA2O94983 1202 aa10.3□□□□□ -0.76
TRAV6-201ENST00000390428 VEGFAP15692 232 aaPredicted RBP10.3□□□□□ -0.76
TRAV6-201ENST00000390428 SMYD5Q6GMV2 418 aa10.3□□□□□ -0.76
TRAV6-201ENST00000390428 NPM2Q86SE8 214 aaKnown RBP10.3□□□□□ -0.76
TRAV6-201ENST00000390428 CCDC24Q8N4L8 307 aa10.3□□□□□ -0.76
TRAV6-201ENST00000390428 JMYQ8N9B5 988 aa10.3□□□□□ -0.76
TRAV6-201ENST00000390428 LRCH3Q96II8 777 aa10.3□□□□□ -0.76
TRAV6-201ENST00000390428 CFAP53Q96M91 514 aa10.3□□□□□ -0.76
TRAV6-201ENST00000390428 RSPH6AQ9H0K4 717 aa10.3□□□□□ -0.76
TRAV6-201ENST00000390428 C21orf2O43822 256 aa10.29□□□□□ -0.76
TRAV6-201ENST00000390428 SAMD7Q7Z3H4 446 aa10.29□□□□□ -0.76
TRAV6-201ENST00000390428 DZIP3Q86Y13 1208 aaKnown RBP10.29□□□□□ -0.76
TRAV6-201ENST00000390428 SETDB2Q96T68 719 aa10.29□□□□□ -0.76
TRAV6-201ENST00000390428 WBP1LQ9NX94 342 aa10.29□□□□□ -0.76
TRAV6-201ENST00000390428 USP16Q9Y5T5 823 aa10.29□□□□□ -0.76
TRAV6-201ENST00000390428 DLG5Q8TDM6 1919 aa10.29□□□□□ -0.76
TRAV6-201ENST00000390428 POTECB2RU33 542 aa10.28□□□□□ -0.76
TRAV6-201ENST00000390428 CNBD1Q8NA66 436 aa10.28□□□□□ -0.76
TRAV6-201ENST00000390428 TSR3Q9UJK0 312 aaKnown RBP10.28□□□□□ -0.76
TRAV6-201ENST00000390428 NUDCQ9Y266 331 aa10.28□□□□□ -0.76
TRAV6-201ENST00000390428 LTBP3Q9NS15 1303 aa10.28□□□□□ -0.76
TRAV6-201ENST00000390428 PRAMEF22A3QJZ6 481 aa10.27□□□□□ -0.77
TRAV6-201ENST00000390428 NPHP1O15259 732 aa10.27□□□□□ -0.77
TRAV6-201ENST00000390428 U2AF1L5P0DN76 240 aaPredicted RBP10.27□□□□□ -0.77
TRAV6-201ENST00000390428 SRGNP10124 158 aa10.27□□□□□ -0.77
TRAV6-201ENST00000390428 PIP4K2AP48426 406 aaPredicted RBP10.27□□□□□ -0.77
TRAV6-201ENST00000390428 ST5P78524 1137 aa10.27□□□□□ -0.77
TRAV6-201ENST00000390428 U2AF1Q01081 240 aaKnown RBP eCLIP10.27□□□□□ -0.77
TRAV6-201ENST00000390428 ERFEQ4G0M1 354 aa10.27□□□□□ -0.77
TRAV6-201ENST00000390428 STYK1Q6J9G0 422 aa10.27□□□□□ -0.77
TRAV6-201ENST00000390428 RTF1Q92541 710 aaKnown RBP10.27□□□□□ -0.77
TRAV6-201ENST00000390428 CNKSR1Q969H4 720 aa10.27□□□□□ -0.77
TRAV6-201ENST00000390428 HPS5Q9UPZ3 1129 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms