RNA–Protein interactions for RNA: ENST00000389675.6

MRPL28-202, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL28, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-202ENST00000389675 CCDC152Q4G0S7 254 aa20.57■□□□□ 0.88
MRPL28-202ENST00000389675 SOGA3Q5TF21 947 aa20.57■□□□□ 0.88
MRPL28-202ENST00000389675 TMX4Q9H1E5 349 aaPredicted RBP20.57■□□□□ 0.88
MRPL28-202ENST00000389675 SLX4Q8IY92 1834 aa20.57■□□□□ 0.88
MRPL28-202ENST00000389675 ABCC4O15439 1325 aa20.56■□□□□ 0.88
MRPL28-202ENST00000389675 PPEF1O14829 653 aaPredicted RBP20.56■□□□□ 0.88
MRPL28-202ENST00000389675 CCT4P50991 539 aaKnown RBP20.56■□□□□ 0.88
MRPL28-202ENST00000389675 CCDC85AQ96PX6 553 aaPredicted RBP20.56■□□□□ 0.88
MRPL28-202ENST00000389675 CTSWP56202 376 aa20.55■□□□□ 0.88
MRPL28-202ENST00000389675 ZKSCAN2Q63HK3 967 aa20.55■□□□□ 0.88
MRPL28-202ENST00000389675 GRAPQ13588 217 aa20.54■□□□□ 0.88
MRPL28-202ENST00000389675 CCDC93Q567U6 631 aa20.54■□□□□ 0.88
MRPL28-202ENST00000389675 ATF7IPQ6VMQ6 1270 aa20.54■□□□□ 0.88
MRPL28-202ENST00000389675 GRAPLQ8TC17 118 aaPredicted RBP20.54■□□□□ 0.88
MRPL28-202ENST00000389675 WDR90Q96KV7 1748 aa20.53■□□□□ 0.88
MRPL28-202ENST00000389675 KIF3CO14782 793 aa20.53■□□□□ 0.88
MRPL28-202ENST00000389675 BBOX1O75936 387 aa20.53■□□□□ 0.88
MRPL28-202ENST00000389675 CASP7P55210 303 aa20.53■□□□□ 0.88
MRPL28-202ENST00000389675 RCAN3Q9UKA8 241 aa20.53■□□□□ 0.88
MRPL28-202ENST00000389675 TRIM27P14373 513 aa20.52■□□□□ 0.88
MRPL28-202ENST00000389675 CLUAP1Q96AJ1 413 aa20.52■□□□□ 0.88
MRPL28-202ENST00000389675 PLA2G12BQ9BX93 195 aa20.52■□□□□ 0.88
MRPL28-202ENST00000389675 MYH3P11055 1940 aa20.51■□□□□ 0.87
MRPL28-202ENST00000389675 RASSF7Q02833 373 aa20.51■□□□□ 0.87
MRPL28-202ENST00000389675 CC2D2BQ6DHV5 1058 aa20.51■□□□□ 0.87
MRPL28-202ENST00000389675 OLFM4Q6UX06 510 aa20.51■□□□□ 0.87
MRPL28-202ENST00000389675 FTSJ3Q8IY81 847 aaKnown RBP20.51■□□□□ 0.87
MRPL28-202ENST00000389675 TTLL11Q8NHH1 800 aa20.51■□□□□ 0.87
MRPL28-202ENST00000389675 C7orf43Q8WVR3 580 aa20.51■□□□□ 0.87
MRPL28-202ENST00000389675 CHMP3Q9Y3E7 222 aa20.51■□□□□ 0.87
MRPL28-202ENST00000389675 TMC4Q7Z404 712 aa20.5■□□□□ 0.87
MRPL28-202ENST00000389675 RTKN2Q8IZC4 609 aa20.5■□□□□ 0.87
MRPL28-202ENST00000389675 SEC31BQ9NQW1 1179 aa20.5■□□□□ 0.87
MRPL28-202ENST00000389675 NFKBIEO00221 500 aa20.49■□□□□ 0.87
MRPL28-202ENST00000389675 NBPF7P0C2Y1 421 aaPredicted RBP20.49■□□□□ 0.87
MRPL28-202ENST00000389675 CELF1Q92879 486 aaKnown RBP20.49■□□□□ 0.87
MRPL28-202ENST00000389675 CDC5LQ99459 802 aaKnown RBP20.49■□□□□ 0.87
MRPL28-202ENST00000389675 TAOK3Q9H2K8 898 aa20.49■□□□□ 0.87
MRPL28-202ENST00000389675 GREM2Q9H772 168 aa20.49■□□□□ 0.87
MRPL28-202ENST00000389675 ATP6V0A2Q9Y487 856 aa20.49■□□□□ 0.87
MRPL28-202ENST00000389675 RPS8P62241 208 aaKnown RBP20.48■□□□□ 0.87
MRPL28-202ENST00000389675 INTS3Q68E01 1043 aaKnown RBP20.48■□□□□ 0.87
MRPL28-202ENST00000389675 ANKRD18AQ8IVF6 992 aa20.48■□□□□ 0.87
MRPL28-202ENST00000389675 SUCLG2Q96I99 432 aa20.48■□□□□ 0.87
MRPL28-202ENST00000389675 USP44Q9H0E7 712 aa20.48■□□□□ 0.87
MRPL28-202ENST00000389675 TNNQ9UQP3 1299 aa20.48■□□□□ 0.87
MRPL28-202ENST00000389675 UTYO14607 1347 aa20.48■□□□□ 0.87
MRPL28-202ENST00000389675 TAF1P21675 1872 aa20.47■□□□□ 0.87
MRPL28-202ENST00000389675 UBTFL1P0CB47 393 aaPredicted RBP20.47■□□□□ 0.87
MRPL28-202ENST00000389675 FAM161AQ3B820 660 aa20.47■□□□□ 0.87
MRPL28-202ENST00000389675 GRIPAP1Q4V328 841 aa20.47■□□□□ 0.87
MRPL28-202ENST00000389675 C9orf131Q5VYM1 1079 aa20.47■□□□□ 0.87
MRPL28-202ENST00000389675 LMBR1LQ6UX01 489 aa20.47■□□□□ 0.87
MRPL28-202ENST00000389675 SP8Q8IXZ3 490 aa20.47■□□□□ 0.87
MRPL28-202ENST00000389675 DZIP1LQ8IYY4 767 aaKnown RBP20.47■□□□□ 0.87
MRPL28-202ENST00000389675 RNF181Q9P0P0 153 aa20.47■□□□□ 0.87
MRPL28-202ENST00000389675 RTL9Q8NET4 1388 aa20.46■□□□□ 0.87
MRPL28-202ENST00000389675 CSF1RP07333 972 aa20.46■□□□□ 0.87
MRPL28-202ENST00000389675 LMNB1P20700 586 aa20.46■□□□□ 0.87
MRPL28-202ENST00000389675 FOXO4P98177 505 aa20.46■□□□□ 0.87
MRPL28-202ENST00000389675 FKBP4Q02790 459 aaKnown RBP eCLIP20.46■□□□□ 0.87
MRPL28-202ENST00000389675 HDAC5Q9UQL6 1122 aa20.46■□□□□ 0.87
MRPL28-202ENST00000389675 LTBP3Q9NS15 1303 aa20.46■□□□□ 0.87
MRPL28-202ENST00000389675 FER1L6Q2WGJ9 1857 aa20.45■□□□□ 0.86
MRPL28-202ENST00000389675 ANKRD18BA2A2Z9 1011 aa20.45■□□□□ 0.86
MRPL28-202ENST00000389675 MS4A1P11836 297 aa20.45■□□□□ 0.86
MRPL28-202ENST00000389675 ITGA6P23229 1130 aa20.45■□□□□ 0.86
MRPL28-202ENST00000389675 IGHMBP2P38935 993 aaKnown RBP20.45■□□□□ 0.86
MRPL28-202ENST00000389675 APLP1P51693 650 aa20.45■□□□□ 0.86
MRPL28-202ENST00000389675 IFIT5Q13325 482 aaKnown RBP20.45■□□□□ 0.86
MRPL28-202ENST00000389675 EPHA10Q5JZY3 1008 aa20.45■□□□□ 0.86
MRPL28-202ENST00000389675 CCDC57Q2TAC2 916 aa20.44■□□□□ 0.86
MRPL28-202ENST00000389675 TAF7LQ5H9L4 462 aa20.44■□□□□ 0.86
MRPL28-202ENST00000389675 DPP8Q6V1X1 898 aaPredicted RBP20.44■□□□□ 0.86
MRPL28-202ENST00000389675 SLC51AQ86UW1 340 aa20.44■□□□□ 0.86
MRPL28-202ENST00000389675 TMEM57Q8N5G2 664 aa20.44■□□□□ 0.86
MRPL28-202ENST00000389675 BICC1Q9H694 974 aaKnown RBP20.44■□□□□ 0.86
MRPL28-202ENST00000389675 GNAI3P08754 354 aa20.43■□□□□ 0.86
MRPL28-202ENST00000389675 MPNDQ8N594 471 aa20.43■□□□□ 0.86
MRPL28-202ENST00000389675 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.43■□□□□ 0.86
MRPL28-202ENST00000389675 PSMD1Q99460 953 aa20.43■□□□□ 0.86
MRPL28-202ENST00000389675 MPHOSPH8Q99549 860 aa20.43■□□□□ 0.86
MRPL28-202ENST00000389675 SBF1O95248 1867 aa20.42■□□□□ 0.86
MRPL28-202ENST00000389675 ITPRIPQ8IWB1 547 aa20.42■□□□□ 0.86
MRPL28-202ENST00000389675 SUPT20HQ8NEM7 779 aa20.42■□□□□ 0.86
MRPL28-202ENST00000389675 MEIS3Q99687 375 aa20.42■□□□□ 0.86
MRPL28-202ENST00000389675 ZNF277Q9NRM2 450 aaPredicted RBP20.42■□□□□ 0.86
MRPL28-202ENST00000389675 NSFL1CQ9UNZ2 370 aaKnown RBP20.42■□□□□ 0.86
MRPL28-202ENST00000389675 COL4A1P02462 1669 aa20.42■□□□□ 0.86
MRPL28-202ENST00000389675 TOMM70O94826 608 aa20.41■□□□□ 0.86
MRPL28-202ENST00000389675 KAZALD1Q96I82 304 aa20.41■□□□□ 0.86
MRPL28-202ENST00000389675 ANKIB1Q9P2G1 1089 aa20.41■□□□□ 0.86
MRPL28-202ENST00000389675 PLIN1O60240 522 aa20.4■□□□□ 0.86
MRPL28-202ENST00000389675 BSDC1Q9NW68 430 aaPredicted RBP20.4■□□□□ 0.86
MRPL28-202ENST00000389675 LRRC37AA6NMS7 1700 aa20.39■□□□□ 0.86
MRPL28-202ENST00000389675 SNED1Q8TER0 1413 aa20.39■□□□□ 0.85
MRPL28-202ENST00000389675 RLBP1P12271 317 aa20.39■□□□□ 0.85
MRPL28-202ENST00000389675 IARSP41252 1262 aaKnown RBP20.39■□□□□ 0.85
MRPL28-202ENST00000389675 PRELPP51888 382 aa20.39■□□□□ 0.85
MRPL28-202ENST00000389675 GPSM2P81274 684 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms