RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 NFATC2IPQ8NCF5 419 aa1.48□□□□□ -2.17
SNORD28-201ENST00000384706 GAS2L2Q8NHY3 880 aa1.48□□□□□ -2.17
SNORD28-201ENST00000384706 ZNF594Q96JF6 807 aaPredicted RBP1.48□□□□□ -2.17
SNORD28-201ENST00000384706 HINFPQ9BQA5 517 aa1.48□□□□□ -2.17
SNORD28-201ENST00000384706 LPIN3Q9BQK8 851 aa1.48□□□□□ -2.17
SNORD28-201ENST00000384706 C2orf49Q9BVC5 232 aaPredicted RBP1.48□□□□□ -2.17
SNORD28-201ENST00000384706 SMG9Q9H0W8 520 aaKnown RBP1.48□□□□□ -2.17
SNORD28-201ENST00000384706 AKTIPQ9H8T0 292 aa1.48□□□□□ -2.17
SNORD28-201ENST00000384706 EFCC1Q9HA90 598 aa1.48□□□□□ -2.17
SNORD28-201ENST00000384706 STOML1Q9UBI4 398 aa1.48□□□□□ -2.17
SNORD28-201ENST00000384706 MKRN1Q9UHC7 482 aaKnown RBP1.48□□□□□ -2.17
SNORD28-201ENST00000384706 COG6Q9Y2V7 657 aa1.48□□□□□ -2.17
SNORD28-201ENST00000384706 RNF114Q9Y508 228 aa1.48□□□□□ -2.17
SNORD28-201ENST00000384706 LOC102724428A0A0B4J2F2 783 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 USP17L3A6NCW0 530 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 USP17L4A6NCW7 530 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 F8W735 103 aaPredicted RBP1.47□□□□□ -2.17
SNORD28-201ENST00000384706 J3QW42 95 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 M0R2N6 131 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 DLL1O00548 723 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 MAP3K6O95382 1288 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 TGFB1P01137 390 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 IGLV1-40P01703 118 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 RARAP10276 462 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 EPB42P16452 691 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 EIF2AK2P19525 551 aaKnown RBP1.47□□□□□ -2.17
SNORD28-201ENST00000384706 RASA1P20936 1047 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 ARID4AP29374 1257 aaPredicted RBP1.47□□□□□ -2.17
SNORD28-201ENST00000384706 CDC25BP30305 580 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 CD97P48960 835 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 IDH3AP50213 366 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 GP2P55259 537 aaKnown RBP1.47□□□□□ -2.17
SNORD28-201ENST00000384706 SIK1P57059 783 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 HDGFL1Q5TGJ6 251 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 USP17L2Q6R6M4 530 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 POTEAQ6S8J7 498 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 USP17L1Q7RTZ2 530 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 WWC1Q8IX03 1113 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 AGGF1Q8N302 714 aaeCLIP1.47□□□□□ -2.17
SNORD28-201ENST00000384706 TMEM130Q8N3G9 435 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 LARGE2Q8N3Y3 721 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 TRPM4Q8TD43 1214 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 TTC9Q92623 222 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 PLD4Q96BZ4 506 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 IFT43Q96FT9 208 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 MRPL18Q9H0U6 180 aaKnown RBP1.47□□□□□ -2.17
SNORD28-201ENST00000384706 KLK14Q9P0G3 267 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 FRRS1LQ9P0K9 344 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 ZFATQ9P243 1243 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 BCS1LQ9Y276 419 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 USP20Q9Y2K6 914 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 RAXQ9Y2V3 346 aa1.47□□□□□ -2.17
SNORD28-201ENST00000384706 OAS3Q9Y6K5 1087 aaKnown RBP1.47□□□□□ -2.17
SNORD28-201ENST00000384706 HMX2A2RU54 273 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 POM121CA8CG34 1229 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 TGFBR3LH3BV60 316 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 LINC01387J3KSC0 135 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 GSC2O15499 205 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 DHX15O43143 795 aaKnown RBP1.46□□□□□ -2.18
SNORD28-201ENST00000384706 ATP9BO43861 1147 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 RAD21O60216 631 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 ADAMTS4O75173 837 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 MICAL2O94851 1124 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 WNT11O96014 354 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 GHRHP01286 108 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 GRNP28799 593 aaKnown RBP1.46□□□□□ -2.18
SNORD28-201ENST00000384706 INPP5BP32019 993 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 GRIK1P39086 918 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 ARSDP51689 593 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 SEC13P55735 322 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 GPLD1P80108 840 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 DGKZQ13574 1117 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 MCM6Q14566 821 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 RTN1Q16799 776 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 IER5Q5VY09 327 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 PLEKHM2Q8IWE5 1019 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 TRIM42Q8IWZ5 723 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 RGL4Q8IZJ4 473 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 SIX5Q8N196 739 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 CMTR1Q8N1G2 835 aaKnown RBP1.46□□□□□ -2.18
SNORD28-201ENST00000384706 STAG2Q8N3U4 1231 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 POM121Q96HA1 1249 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 NSUN5Q96P11 429 aaKnown RBP1.46□□□□□ -2.18
SNORD28-201ENST00000384706 UBL7Q96S82 380 aaPredicted RBP1.46□□□□□ -2.18
SNORD28-201ENST00000384706 RBSNQ9H1K0 784 aa1.46□□□□□ -2.18
SNORD28-201ENST00000384706 DMGDHQ9UI17 866 aaKnown RBP1.46□□□□□ -2.18
SNORD28-201ENST00000384706 RTCBQ9Y3I0 505 aaKnown RBP1.46□□□□□ -2.18
SNORD28-201ENST00000384706 KIAA1324LA8MWY0 1029 aaPredicted RBP1.45□□□□□ -2.18
SNORD28-201ENST00000384706 OPLAHO14841 1288 aa1.45□□□□□ -2.18
SNORD28-201ENST00000384706 MMP20O60882 483 aa1.45□□□□□ -2.18
SNORD28-201ENST00000384706 XYLBO75191 536 aa1.45□□□□□ -2.18
SNORD28-201ENST00000384706 DKK1O94907 266 aa1.45□□□□□ -2.18
SNORD28-201ENST00000384706 PSAPP07602 524 aa1.45□□□□□ -2.18
SNORD28-201ENST00000384706 CD68P34810 354 aaPredicted RBP1.45□□□□□ -2.18
SNORD28-201ENST00000384706 NRLP54845 237 aa1.45□□□□□ -2.18
SNORD28-201ENST00000384706 NFIAQ12857 509 aa1.45□□□□□ -2.18
SNORD28-201ENST00000384706 SETDB1Q15047 1291 aa1.45□□□□□ -2.18
SNORD28-201ENST00000384706 C11orf91Q3C1V1 193 aa1.45□□□□□ -2.18
SNORD28-201ENST00000384706 FBLN7Q53RD9 439 aa1.45□□□□□ -2.18
SNORD28-201ENST00000384706 INTS5Q6P9B9 1019 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms