RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 A0A087WUV0 522 aaPredicted RBP17.47■□□□□ 0.39
VLDLR-202ENST00000382099 GSDMDP57764 484 aa17.47■□□□□ 0.39
VLDLR-202ENST00000382099 PPP1R12AO14974 1030 aaPredicted RBP17.47■□□□□ 0.39
VLDLR-202ENST00000382099 API5Q9BZZ5 524 aaKnown RBP17.47■□□□□ 0.39
VLDLR-202ENST00000382099 ZBTB12Q9Y330 459 aaPredicted RBP17.47■□□□□ 0.39
VLDLR-202ENST00000382099 SRGAP3O43295 1099 aa17.47■□□□□ 0.39
VLDLR-202ENST00000382099 CEBPZQ03701 1054 aaKnown RBP17.47■□□□□ 0.39
VLDLR-202ENST00000382099 LRRFIP1Q32MZ4 808 aaKnown RBP17.47■□□□□ 0.39
VLDLR-202ENST00000382099 SRRTQ9BXP5 876 aaKnown RBP17.47■□□□□ 0.39
VLDLR-202ENST00000382099 CLSTN2Q9H4D0 955 aa17.47■□□□□ 0.39
VLDLR-202ENST00000382099 CD109Q6YHK3 1445 aa17.46■□□□□ 0.39
VLDLR-202ENST00000382099 TULP4Q9NRJ4 1543 aa17.46■□□□□ 0.39
VLDLR-202ENST00000382099 WWC2Q6AWC2 1192 aa17.46■□□□□ 0.39
VLDLR-202ENST00000382099 NECAB1Q8N987 351 aa17.46■□□□□ 0.39
VLDLR-202ENST00000382099 CNNM3Q8NE01 707 aa17.46■□□□□ 0.39
VLDLR-202ENST00000382099 RABEP2Q9H5N1 569 aa17.46■□□□□ 0.39
VLDLR-202ENST00000382099 LARGE1O95461 756 aa17.45■□□□□ 0.38
VLDLR-202ENST00000382099 HNRNPH1P31943 449 aaKnown RBP17.45■□□□□ 0.38
VLDLR-202ENST00000382099 NBPF11Q86T75 865 aa17.45■□□□□ 0.38
VLDLR-202ENST00000382099 GPR161Q8N6U8 529 aaKnown RBP17.45■□□□□ 0.38
VLDLR-202ENST00000382099 ANKRD44Q8N8A2 993 aa17.45■□□□□ 0.38
VLDLR-202ENST00000382099 LMTK2Q8IWU2 1503 aa17.45■□□□□ 0.38
VLDLR-202ENST00000382099 VAMP4O75379 141 aa17.45■□□□□ 0.38
VLDLR-202ENST00000382099 EIF3JO75822 258 aaKnown RBP17.45■□□□□ 0.38
VLDLR-202ENST00000382099 MAP4K4O95819 1239 aaPredicted RBP17.45■□□□□ 0.38
VLDLR-202ENST00000382099 GNAI3P08754 354 aa17.45■□□□□ 0.38
VLDLR-202ENST00000382099 KRT24Q2M2I5 525 aa17.45■□□□□ 0.38
VLDLR-202ENST00000382099 LRRC31Q6UY01 552 aa17.45■□□□□ 0.38
VLDLR-202ENST00000382099 AOPEPQ8N6M6 819 aa17.45■□□□□ 0.38
VLDLR-202ENST00000382099 APOBRQ0VD83 1088 aa17.45■□□□□ 0.38
VLDLR-202ENST00000382099 RDXP35241 583 aaKnown RBP17.44■□□□□ 0.38
VLDLR-202ENST00000382099 NAIF1Q69YI7 327 aaPredicted RBP17.44■□□□□ 0.38
VLDLR-202ENST00000382099 RUFY3Q7L099 469 aa17.44■□□□□ 0.38
VLDLR-202ENST00000382099 ERCC4Q92889 916 aaPredicted RBP17.44■□□□□ 0.38
VLDLR-202ENST00000382099 NPATQ14207 1427 aa17.44■□□□□ 0.38
VLDLR-202ENST00000382099 CHMLP26374 656 aa17.44■□□□□ 0.38
VLDLR-202ENST00000382099 PPP2R3AQ06190 1150 aa17.44■□□□□ 0.38
VLDLR-202ENST00000382099 AKAP2Q9Y2D5 859 aa17.44■□□□□ 0.38
VLDLR-202ENST00000382099 FBXO31Q5XUX0 539 aaPredicted RBP17.43■□□□□ 0.38
VLDLR-202ENST00000382099 KAT2BQ92831 832 aa17.43■□□□□ 0.38
VLDLR-202ENST00000382099 NBPF20Q3BBV1 942 aa17.43■□□□□ 0.38
VLDLR-202ENST00000382099 CEP85Q6P2H3 762 aa17.43■□□□□ 0.38
VLDLR-202ENST00000382099 PLEKHF1Q96S99 279 aa17.43■□□□□ 0.38
VLDLR-202ENST00000382099 IFIT2P09913 472 aaKnown RBP17.43■□□□□ 0.38
VLDLR-202ENST00000382099 GNG11P61952 73 aa17.42■□□□□ 0.38
VLDLR-202ENST00000382099 TWISTNBQ3B726 338 aaPredicted RBP17.42■□□□□ 0.38
VLDLR-202ENST00000382099 CDC37L1Q7L3B6 337 aa17.42■□□□□ 0.38
VLDLR-202ENST00000382099 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
VLDLR-202ENST00000382099 GLI2P10070 1586 aa17.42■□□□□ 0.38
VLDLR-202ENST00000382099 EIF5P55010 431 aaKnown RBP17.42■□□□□ 0.38
VLDLR-202ENST00000382099 PRPF38AQ8NAV1 312 aaKnown RBP17.42■□□□□ 0.38
VLDLR-202ENST00000382099 IL16Q14005 1332 aa17.42■□□□□ 0.38
VLDLR-202ENST00000382099 IQCB1Q15051 598 aa17.42■□□□□ 0.38
VLDLR-202ENST00000382099 RPAP2Q8IXW5 612 aaPredicted RBP17.42■□□□□ 0.38
VLDLR-202ENST00000382099 SUGCTQ9HAC7 445 aa17.42■□□□□ 0.38
VLDLR-202ENST00000382099 ARHGEF28Q8N1W1 1705 aaKnown RBP17.41■□□□□ 0.38
VLDLR-202ENST00000382099 PSDA5PKW4 1024 aaPredicted RBP17.41■□□□□ 0.38
VLDLR-202ENST00000382099 JAKMIP3Q5VZ66 844 aa17.41■□□□□ 0.38
VLDLR-202ENST00000382099 ATP2B2Q01814 1243 aa17.41■□□□□ 0.38
VLDLR-202ENST00000382099 STX1AQ16623 288 aa17.41■□□□□ 0.38
VLDLR-202ENST00000382099 CYB5RLQ6IPT4 315 aa17.41■□□□□ 0.38
VLDLR-202ENST00000382099 SARM1Q6SZW1 724 aa17.41■□□□□ 0.38
VLDLR-202ENST00000382099 ABCC4O15439 1325 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 N4BP2L2Q92802 583 aaPredicted RBP17.4■□□□□ 0.38
VLDLR-202ENST00000382099 UTP14AQ9BVJ6 771 aaKnown RBP17.4■□□□□ 0.38
VLDLR-202ENST00000382099 SCAND2PQ9GZW5 306 aaPredicted RBP17.4■□□□□ 0.38
VLDLR-202ENST00000382099 RBM28Q9NW13 759 aaKnown RBP17.4■□□□□ 0.38
VLDLR-202ENST00000382099 IFNKQ9P0W0 207 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 NPHP3Q7Z494 1330 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 FRMD3A2A2Y4 597 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 MPHOSPH10O00566 681 aaKnown RBP17.4■□□□□ 0.38
VLDLR-202ENST00000382099 HMMRO75330 724 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 PPFIA4O75335 1185 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 MAP9Q49MG5 647 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 NBPF6Q5VWK0 638 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 CPLX2Q6PUV4 134 aaKnown RBP17.4■□□□□ 0.38
VLDLR-202ENST00000382099 ERC1Q8IUD2 1116 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 GOLGA1Q92805 767 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 NBPF4Q96M43 638 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 PAX7P23759 505 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 NF2P35240 595 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 ARMCX5Q6P1M9 558 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 HDXQ7Z353 690 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 CCDC150Q8NCX0 1101 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 FAM204AQ9H8W3 233 aa17.4■□□□□ 0.38
VLDLR-202ENST00000382099 SLC4A10Q6U841 1118 aa17.39■□□□□ 0.37
VLDLR-202ENST00000382099 MEIS3Q99687 375 aa17.39■□□□□ 0.37
VLDLR-202ENST00000382099 PUF60Q9UHX1 559 aaKnown RBP17.39■□□□□ 0.37
VLDLR-202ENST00000382099 PHLPP2Q6ZVD8 1323 aa17.39■□□□□ 0.37
VLDLR-202ENST00000382099 MED14O60244 1454 aa17.39■□□□□ 0.37
VLDLR-202ENST00000382099 HMOX1P09601 288 aa17.39■□□□□ 0.37
VLDLR-202ENST00000382099 C14orf37Q86TY3 774 aa17.39■□□□□ 0.37
VLDLR-202ENST00000382099 ZNF428Q96B54 188 aa17.39■□□□□ 0.37
VLDLR-202ENST00000382099 ACBD3Q9H3P7 528 aa17.39■□□□□ 0.37
VLDLR-202ENST00000382099 COL3A1P02461 1466 aaPredicted RBP17.38■□□□□ 0.37
VLDLR-202ENST00000382099 CPP00450 1065 aa17.38■□□□□ 0.37
VLDLR-202ENST00000382099 CCT5P48643 541 aa17.38■□□□□ 0.37
VLDLR-202ENST00000382099 GNL3LQ9NVN8 582 aaKnown RBP17.38■□□□□ 0.37
VLDLR-202ENST00000382099 SH3BP1Q9Y3L3 701 aa17.38■□□□□ 0.37
VLDLR-202ENST00000382099 PARP3Q9Y6F1 533 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms