RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 ZNF609O15014 1411 aa23.29■■□□□ 1.32
GMDS-201ENST00000380805 COL5A3P25940 1745 aaPredicted RBP23.28■■□□□ 1.32
GMDS-201ENST00000380805 ERVV-1B6SEH8 477 aa23.28■■□□□ 1.32
GMDS-201ENST00000380805 NEK4P51957 841 aa23.28■■□□□ 1.32
GMDS-201ENST00000380805 CWC22Q9HCG8 908 aaKnown RBP23.28■■□□□ 1.32
GMDS-201ENST00000380805 EYA2O00167 538 aa23.28■■□□□ 1.32
GMDS-201ENST00000380805 CSF1RP07333 972 aa23.28■■□□□ 1.32
GMDS-201ENST00000380805 CLEC17AQ6ZS10 378 aa23.28■■□□□ 1.32
GMDS-201ENST00000380805 KIAA1211Q6ZU35 1233 aa23.28■■□□□ 1.32
GMDS-201ENST00000380805 TICAM2Q86XR7 235 aa23.28■■□□□ 1.32
GMDS-201ENST00000380805 MED23Q9ULK4 1368 aa23.27■■□□□ 1.32
GMDS-201ENST00000380805 GSE1Q14687 1217 aa23.26■■□□□ 1.31
GMDS-201ENST00000380805 TNPO1Q92973 898 aaKnown RBP23.26■■□□□ 1.31
GMDS-201ENST00000380805 SYTL4Q96C24 671 aaPredicted RBP23.26■■□□□ 1.31
GMDS-201ENST00000380805 BOLA2Q9H3K6 86 aa23.26■■□□□ 1.31
GMDS-201ENST00000380805 CUL4AQ13619 759 aa23.25■■□□□ 1.31
GMDS-201ENST00000380805 NLRP10Q86W26 655 aa23.25■■□□□ 1.31
GMDS-201ENST00000380805 SNX14Q9Y5W7 946 aa23.25■■□□□ 1.31
GMDS-201ENST00000380805 HLFQ16534 295 aa23.25■■□□□ 1.31
GMDS-201ENST00000380805 HAUS7Q99871 368 aa23.25■■□□□ 1.31
GMDS-201ENST00000380805 DBNDD2Q9BQY9 259 aa23.25■■□□□ 1.31
GMDS-201ENST00000380805 CHMP3Q9Y3E7 222 aa23.25■■□□□ 1.31
GMDS-201ENST00000380805 ZNF330Q9Y3S2 320 aaPredicted RBP23.25■■□□□ 1.31
GMDS-201ENST00000380805 CCDC171Q6TFL3 1326 aa23.24■■□□□ 1.31
GMDS-201ENST00000380805 CYP2E1P05181 493 aaPredicted RBP23.24■■□□□ 1.31
GMDS-201ENST00000380805 LRP5O75197 1615 aa23.23■■□□□ 1.31
GMDS-201ENST00000380805 DDX11L8A8MPP1 907 aa23.23■■□□□ 1.31
GMDS-201ENST00000380805 EIF5P55010 431 aaKnown RBP23.23■■□□□ 1.31
GMDS-201ENST00000380805 NMIQ13287 307 aaPredicted RBP23.23■■□□□ 1.31
GMDS-201ENST00000380805 TMX3Q96JJ7 454 aa23.23■■□□□ 1.31
GMDS-201ENST00000380805 MYH14Q7Z406 1995 aaKnown RBP23.23■■□□□ 1.31
GMDS-201ENST00000380805 FSD1Q9BTV5 496 aa23.22■■□□□ 1.31
GMDS-201ENST00000380805 BCORQ6W2J9 1755 aa23.22■■□□□ 1.31
GMDS-201ENST00000380805 NUCB2P80303 420 aa23.22■■□□□ 1.31
GMDS-201ENST00000380805 INTS4Q96HW7 963 aaKnown RBP23.22■■□□□ 1.31
GMDS-201ENST00000380805 GBP4Q96PP9 640 aa23.22■■□□□ 1.31
GMDS-201ENST00000380805 FOXD4L1Q9NU39 408 aa23.22■■□□□ 1.31
GMDS-201ENST00000380805 LAMB2P55268 1798 aa23.21■■□□□ 1.31
GMDS-201ENST00000380805 PTH1RQ03431 593 aa23.21■■□□□ 1.31
GMDS-201ENST00000380805 NECTIN1Q15223 517 aa23.21■■□□□ 1.31
GMDS-201ENST00000380805 CCDC57Q2TAC2 916 aa23.21■■□□□ 1.31
GMDS-201ENST00000380805 INTS5Q6P9B9 1019 aaKnown RBP23.21■■□□□ 1.31
GMDS-201ENST00000380805 MAP4K1Q92918 833 aa23.21■■□□□ 1.31
GMDS-201ENST00000380805 FAM89AQ96GI7 184 aa23.21■■□□□ 1.31
GMDS-201ENST00000380805 ACSBG1Q96GR2 724 aa23.21■■□□□ 1.31
GMDS-201ENST00000380805 FAM227BQ96M60 508 aa23.21■■□□□ 1.31
GMDS-201ENST00000380805 TTC14Q96N46 770 aa23.21■■□□□ 1.31
GMDS-201ENST00000380805 TM6SF1Q9BZW5 370 aa23.21■■□□□ 1.31
GMDS-201ENST00000380805 PALLDQ8WX93 1383 aa23.21■■□□□ 1.31
GMDS-201ENST00000380805 LRRC24Q50LG9 513 aa23.2■■□□□ 1.3
GMDS-201ENST00000380805 DZIP3Q86Y13 1208 aaKnown RBP23.2■■□□□ 1.3
GMDS-201ENST00000380805 ZNF34Q8IZ26 560 aa23.2■■□□□ 1.3
GMDS-201ENST00000380805 RASEFQ8IZ41 740 aa23.2■■□□□ 1.3
GMDS-201ENST00000380805 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.2■■□□□ 1.3
GMDS-201ENST00000380805 CCDC87Q9NVE4 849 aa23.2■■□□□ 1.3
GMDS-201ENST00000380805 LOC102724428A0A0B4J2F2 783 aa23.19■■□□□ 1.3
GMDS-201ENST00000380805 A0A0D9SFI3 127 aa23.19■■□□□ 1.3
GMDS-201ENST00000380805 SIK1P57059 783 aa23.19■■□□□ 1.3
GMDS-201ENST00000380805 SMARCC1Q92922 1105 aaPredicted RBP23.19■■□□□ 1.3
GMDS-201ENST00000380805 ZNF594Q96JF6 807 aaPredicted RBP23.19■■□□□ 1.3
GMDS-201ENST00000380805 KCNQ2O43526 872 aa23.18■■□□□ 1.3
GMDS-201ENST00000380805 PTMSP20962 102 aa23.18■■□□□ 1.3
GMDS-201ENST00000380805 ILDR2Q71H61 639 aa23.18■■□□□ 1.3
GMDS-201ENST00000380805 PTF1AQ7RTS3 328 aa23.18■■□□□ 1.3
GMDS-201ENST00000380805 AK7Q96M32 723 aa23.18■■□□□ 1.3
GMDS-201ENST00000380805 UPF3BQ9BZI7 483 aaKnown RBP23.18■■□□□ 1.3
GMDS-201ENST00000380805 RIC1Q4ADV7 1423 aa23.17■■□□□ 1.3
GMDS-201ENST00000380805 ZGPATQ8N5A5 531 aaKnown RBP23.17■■□□□ 1.3
GMDS-201ENST00000380805 UBN2Q6ZU65 1347 aa23.17■■□□□ 1.3
GMDS-201ENST00000380805 CRKLP46109 303 aaKnown RBP23.16■■□□□ 1.3
GMDS-201ENST00000380805 IFIT5Q13325 482 aaKnown RBP23.16■■□□□ 1.3
GMDS-201ENST00000380805 FAM196AQ6ZSG2 479 aa23.16■■□□□ 1.3
GMDS-201ENST00000380805 KBTBD3Q8NAB2 608 aa23.16■■□□□ 1.3
GMDS-201ENST00000380805 TTLL11Q8NHH1 800 aa23.16■■□□□ 1.3
GMDS-201ENST00000380805 PUS3Q9BZE2 481 aaKnown RBP23.16■■□□□ 1.3
GMDS-201ENST00000380805 RPAP1Q9BWH6 1393 aaPredicted RBP23.16■■□□□ 1.3
GMDS-201ENST00000380805 DDX60Q8IY21 1712 aaKnown RBP23.16■■□□□ 1.3
GMDS-201ENST00000380805 A0A1B0GUL7 405 aa23.16■■□□□ 1.3
GMDS-201ENST00000380805 GPTP24298 496 aa23.16■■□□□ 1.3
GMDS-201ENST00000380805 SSFA2P28290 1259 aa23.16■■□□□ 1.3
GMDS-201ENST00000380805 ATP6V1AP38606 617 aa23.16■■□□□ 1.3
GMDS-201ENST00000380805 CTSWP56202 376 aa23.16■■□□□ 1.3
GMDS-201ENST00000380805 CEP126Q9P2H0 1117 aa23.16■■□□□ 1.3
GMDS-201ENST00000380805 RBM8AQ9Y5S9 174 aaKnown RBP23.16■■□□□ 1.3
GMDS-201ENST00000380805 ABCC12Q96J65 1359 aa23.15■■□□□ 1.3
GMDS-201ENST00000380805 ITPK1Q13572 414 aa23.15■■□□□ 1.3
GMDS-201ENST00000380805 EDC3Q96F86 508 aaKnown RBP23.15■■□□□ 1.3
GMDS-201ENST00000380805 AKAP2Q9Y2D5 859 aa23.15■■□□□ 1.3
GMDS-201ENST00000380805 SBF2Q86WG5 1849 aa23.15■■□□□ 1.3
GMDS-201ENST00000380805 SH3TC1Q8TE82 1336 aa23.14■■□□□ 1.3
GMDS-201ENST00000380805 USPL1Q5W0Q7 1092 aa23.14■■□□□ 1.3
GMDS-201ENST00000380805 ZSWIM6Q9HCJ5 1215 aa23.14■■□□□ 1.3
GMDS-201ENST00000380805 ARAP2Q8WZ64 1704 aa23.14■■□□□ 1.3
GMDS-201ENST00000380805 NHSQ6T4R5 1651 aa23.14■■□□□ 1.29
GMDS-201ENST00000380805 TIMM10P62072 90 aa23.13■■□□□ 1.29
GMDS-201ENST00000380805 TSGA10IPQ3SY00 556 aa23.13■■□□□ 1.29
GMDS-201ENST00000380805 PRPF40BQ6NWY9 871 aaKnown RBP23.13■■□□□ 1.29
GMDS-201ENST00000380805 TBC1D2BQ9UPU7 963 aa23.13■■□□□ 1.29
GMDS-201ENST00000380805 IRS4O14654 1257 aaPredicted RBP23.13■■□□□ 1.29
GMDS-201ENST00000380805 PDE8AO60658 829 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms