RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 ARHGEF6Q15052 776 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 NFKBIBQ15653 356 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 ZMYM3Q14202 1370 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 KDM4AO75164 1064 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 METAP2P50579 478 aaKnown RBP eCLIP8.24□□□□□ -1.09
CCDC171-201ENST00000380701 GSDMDP57764 484 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 DENND2AQ9ULE3 1009 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 ACTN2P35609 894 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 PAFAH1B1P43034 410 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 SSR1P43307 286 aaKnown RBP8.24□□□□□ -1.09
CCDC171-201ENST00000380701 RBM25P49756 843 aaKnown RBP8.24□□□□□ -1.09
CCDC171-201ENST00000380701 TTLL5Q6EMB2 1281 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 IP6K1Q92551 441 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 ALS2CR12Q96Q35 445 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 IMPG2Q9BZV3 1241 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 PI4KAP2A4QPH2 592 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 GRM8O00222 908 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 CFAP100Q494V2 611 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 PI4KAP1Q8N8J0 262 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 DNAJC5BQ9UF47 199 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.24□□□□□ -1.09
CCDC171-201ENST00000380701 MAP3K5Q99683 1374 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 NEK1Q96PY6 1258 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 BEGAINQ9BUH8 593 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 USP16Q9Y5T5 823 aa8.24□□□□□ -1.09
CCDC171-201ENST00000380701 POLR3AO14802 1390 aaPredicted RBP8.24□□□□□ -1.09
CCDC171-201ENST00000380701 KIAA0754O94854 1291 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 KRT13P13646 458 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 CCDC183Q5T5S1 534 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 STK11IPQ8N1F8 1099 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 BACH2Q9BYV9 841 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 GCOM1H8Y6P7 765 aaPredicted RBP8.23□□□□□ -1.09
CCDC171-201ENST00000380701 MYZAPP0CAP1 466 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 CYP7A1P22680 504 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 GNA11P29992 359 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 SYCP3Q8IZU3 236 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 CCDC87Q9NVE4 849 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 GOLGA6L10A0A0M3HER8 536 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 KIF5CO60282 957 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 CCDC40Q4G0X9 1142 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 FILIP1Q7Z7B0 1213 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 MAP4K4O95819 1239 aaPredicted RBP8.23□□□□□ -1.09
CCDC171-201ENST00000380701 ENOX2Q16206 610 aaKnown RBP8.23□□□□□ -1.09
CCDC171-201ENST00000380701 RNF214Q8ND24 703 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 CNNM3Q8NE01 707 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 SSX2IPQ9Y2D8 614 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 YTHDC2Q9H6S0 1430 aaKnown RBP8.23□□□□□ -1.09
CCDC171-201ENST00000380701 EIF6P56537 245 aaKnown RBP8.23□□□□□ -1.09
CCDC171-201ENST00000380701 SMARCC2Q8TAQ2 1214 aa8.23□□□□□ -1.09
CCDC171-201ENST00000380701 CCDC8Q9H0W5 538 aaPredicted RBP8.23□□□□□ -1.09
CCDC171-201ENST00000380701 XAGE3Q8WTP9 111 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 CCDC97Q96F63 343 aaPredicted RBP8.22□□□□□ -1.09
CCDC171-201ENST00000380701 CTAGE1Q96RT6 745 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 ASXL1Q8IXJ9 1541 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 CHRNA2Q15822 529 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 TBC1D5Q92609 795 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 UBA5Q9GZZ9 404 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 CCDC102BQ68D86 513 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 MCTP2Q6DN12 878 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 RHPN1Q8TCX5 695 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 ORC3Q9UBD5 711 aaPredicted RBP8.22□□□□□ -1.09
CCDC171-201ENST00000380701 SAMM50Q9Y512 469 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 ZBTB43O43298 467 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 GCP02774 474 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 RBM26Q5T8P6 1007 aaKnown RBP8.22□□□□□ -1.09
CCDC171-201ENST00000380701 CCDC82Q8N4S0 544 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 CNBD1Q8NA66 436 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 SREK1Q8WXA9 508 aaKnown RBP8.22□□□□□ -1.09
CCDC171-201ENST00000380701 SPINK5Q9NQ38 1064 aaPredicted RBP8.22□□□□□ -1.09
CCDC171-201ENST00000380701 INCENPQ9NQS7 918 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 MBIPQ9NS73 344 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 TUBB4AP04350 444 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 PPP2R5BQ15173 497 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 GRIPAP1Q4V328 841 aa8.22□□□□□ -1.09
CCDC171-201ENST00000380701 CCDC117Q8IWD4 279 aaPredicted RBP8.22□□□□□ -1.09
CCDC171-201ENST00000380701 RBM28Q9NW13 759 aaKnown RBP8.22□□□□□ -1.09
CCDC171-201ENST00000380701 CTNNA2P26232 953 aa8.21□□□□□ -1.09
CCDC171-201ENST00000380701 HDAC1Q13547 482 aaPredicted RBP8.21□□□□□ -1.09
CCDC171-201ENST00000380701 IFIT1BQ5T764 474 aaKnown RBP8.21□□□□□ -1.09
CCDC171-201ENST00000380701 KCNG4Q8TDN1 519 aa8.21□□□□□ -1.09
CCDC171-201ENST00000380701 TBC1D22AQ8WUA7 517 aa8.21□□□□□ -1.09
CCDC171-201ENST00000380701 TSNARE1Q96NA8 513 aa8.21□□□□□ -1.09
CCDC171-201ENST00000380701 SLC5A4Q9NY91 659 aa8.21□□□□□ -1.09
CCDC171-201ENST00000380701 SPDYE3A6NKU9 549 aa8.21□□□□□ -1.09
CCDC171-201ENST00000380701 PATL2C9JE40 543 aaKnown RBP8.21□□□□□ -1.09
CCDC171-201ENST00000380701 USP8P40818 1118 aa8.21□□□□□ -1.09
CCDC171-201ENST00000380701 MTIF2P46199 727 aaKnown RBP8.21□□□□□ -1.09
CCDC171-201ENST00000380701 RRP36Q96EU6 259 aaKnown RBP8.21□□□□□ -1.09
CCDC171-201ENST00000380701 MIS18AQ9NYP9 233 aa8.21□□□□□ -1.09
CCDC171-201ENST00000380701 TMOD4Q9NZQ9 345 aa8.21□□□□□ -1.09
CCDC171-201ENST00000380701 LDHBP07195 334 aaKnown RBP8.21□□□□□ -1.1
CCDC171-201ENST00000380701 TOP1P11387 765 aaKnown RBP8.21□□□□□ -1.1
CCDC171-201ENST00000380701 TSPYL1Q9H0U9 437 aa8.21□□□□□ -1.1
CCDC171-201ENST00000380701 MAGEB6P1A0A0J9YX57 407 aa8.21□□□□□ -1.1
CCDC171-201ENST00000380701 MCMDC2Q4G0Z9 681 aa8.21□□□□□ -1.1
CCDC171-201ENST00000380701 COPS6Q7L5N1 327 aa8.21□□□□□ -1.1
CCDC171-201ENST00000380701 SNX16P57768 344 aa8.21□□□□□ -1.1
CCDC171-201ENST00000380701 ATP8B2P98198 1209 aa8.21□□□□□ -1.1
CCDC171-201ENST00000380701 RTN1Q16799 776 aa8.21□□□□□ -1.1
CCDC171-201ENST00000380701 BBXQ8WY36 941 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms