RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 CIAPIN1Q6FI81 312 aa11.46□□□□□ -0.57
PMS2-202ENST00000380416 SLC39A7Q92504 469 aa11.46□□□□□ -0.57
PMS2-202ENST00000380416 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
PMS2-202ENST00000380416 HHIPL1Q96JK4 782 aa11.46□□□□□ -0.57
PMS2-202ENST00000380416 SZT2Q5T011 3432 aa11.45□□□□□ -0.58
PMS2-202ENST00000380416 A1BGP04217 495 aa11.45□□□□□ -0.58
PMS2-202ENST00000380416 RIPK4P57078 832 aa11.45□□□□□ -0.58
PMS2-202ENST00000380416 SAPCD2Q86UD0 394 aa11.45□□□□□ -0.58
PMS2-202ENST00000380416 CCDC146Q8IYE0 955 aa11.45□□□□□ -0.58
PMS2-202ENST00000380416 THUMPD2Q9BTF0 503 aaKnown RBP11.45□□□□□ -0.58
PMS2-202ENST00000380416 MFRPQ9BY79 579 aa11.45□□□□□ -0.58
PMS2-202ENST00000380416 MIS18AQ9NYP9 233 aa11.45□□□□□ -0.58
PMS2-202ENST00000380416 PDZRN3Q9UPQ7 1066 aa11.45□□□□□ -0.58
PMS2-202ENST00000380416 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
PMS2-202ENST00000380416 SOGA3Q5TF21 947 aa11.44□□□□□ -0.58
PMS2-202ENST00000380416 ZNF622Q969S3 477 aaKnown RBP eCLIP11.44□□□□□ -0.58
PMS2-202ENST00000380416 RUNDC1Q96C34 613 aa11.44□□□□□ -0.58
PMS2-202ENST00000380416 BCL2L12Q9HB09 334 aa11.44□□□□□ -0.58
PMS2-202ENST00000380416 TBC1D2BQ9UPU7 963 aa11.44□□□□□ -0.58
PMS2-202ENST00000380416 USP16Q9Y5T5 823 aa11.44□□□□□ -0.58
PMS2-202ENST00000380416 TRAF5O00463 557 aa11.43□□□□□ -0.58
PMS2-202ENST00000380416 TMPOP42166 694 aaKnown RBP11.43□□□□□ -0.58
PMS2-202ENST00000380416 MAMSTRQ6ZN01 415 aa11.43□□□□□ -0.58
PMS2-202ENST00000380416 BICDL1Q6ZP65 573 aa11.43□□□□□ -0.58
PMS2-202ENST00000380416 DZIP3Q86Y13 1208 aaKnown RBP11.43□□□□□ -0.58
PMS2-202ENST00000380416 TSPYL4Q9UJ04 414 aa11.43□□□□□ -0.58
PMS2-202ENST00000380416 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
PMS2-202ENST00000380416 PIP4K2AP48426 406 aaPredicted RBP11.42□□□□□ -0.58
PMS2-202ENST00000380416 NEUROD2Q15784 382 aa11.42□□□□□ -0.58
PMS2-202ENST00000380416 LCE2DQ5TA82 110 aaPredicted RBP11.42□□□□□ -0.58
PMS2-202ENST00000380416 PRPF40BQ6NWY9 871 aaKnown RBP11.42□□□□□ -0.58
PMS2-202ENST00000380416 GPC2Q8N158 579 aa11.42□□□□□ -0.58
PMS2-202ENST00000380416 SAGE1Q9NXZ1 904 aa11.42□□□□□ -0.58
PMS2-202ENST00000380416 RRP7AQ9Y3A4 280 aaKnown RBP11.42□□□□□ -0.58
PMS2-202ENST00000380416 FZD9O00144 591 aa11.41□□□□□ -0.58
PMS2-202ENST00000380416 NPHP1O15259 732 aa11.41□□□□□ -0.58
PMS2-202ENST00000380416 CAMTA2O94983 1202 aa11.41□□□□□ -0.58
PMS2-202ENST00000380416 PDE6BP35913 854 aa11.41□□□□□ -0.58
PMS2-202ENST00000380416 EIF4A1P60842 406 aaKnown RBP11.41□□□□□ -0.58
PMS2-202ENST00000380416 TBC1D9BQ66K14 1250 aa11.41□□□□□ -0.58
PMS2-202ENST00000380416 CTU1Q7Z7A3 348 aaKnown RBP11.41□□□□□ -0.58
PMS2-202ENST00000380416 BRIP1Q9BX63 1249 aa11.41□□□□□ -0.58
PMS2-202ENST00000380416 ADAMTS8Q9UP79 889 aa11.41□□□□□ -0.58
PMS2-202ENST00000380416 HPS5Q9UPZ3 1129 aa11.41□□□□□ -0.58
PMS2-202ENST00000380416 ZNF652Q9Y2D9 606 aa11.41□□□□□ -0.58
PMS2-202ENST00000380416 NOGQ13253 232 aa11.4□□□□□ -0.58
PMS2-202ENST00000380416 FBXO22Q8NEZ5 403 aa11.4□□□□□ -0.58
PMS2-202ENST00000380416 CNKSR1Q969H4 720 aa11.4□□□□□ -0.58
PMS2-202ENST00000380416 FAM163AQ96GL9 167 aaPredicted RBP11.4□□□□□ -0.58
PMS2-202ENST00000380416 ZIC5Q96T25 663 aa11.4□□□□□ -0.58
PMS2-202ENST00000380416 SETDB2Q96T68 719 aa11.4□□□□□ -0.58
PMS2-202ENST00000380416 BABAM1Q9NWV8 329 aa11.4□□□□□ -0.58
PMS2-202ENST00000380416 AKAP11Q9UKA4 1901 aa11.39□□□□□ -0.59
PMS2-202ENST00000380416 CUL9Q8IWT3 2517 aa11.39□□□□□ -0.59
PMS2-202ENST00000380416 NBPF26B4DH59 902 aa11.39□□□□□ -0.59
PMS2-202ENST00000380416 STYK1Q6J9G0 422 aa11.39□□□□□ -0.59
PMS2-202ENST00000380416 NBPF10Q6P3W6 841 aaKnown RBP11.39□□□□□ -0.59
PMS2-202ENST00000380416 C7orf43Q8WVR3 580 aa11.39□□□□□ -0.59
PMS2-202ENST00000380416 A0A0C4DFX4 3053 aa11.39□□□□□ -0.59
PMS2-202ENST00000380416 NUP98P52948 1817 aa11.38□□□□□ -0.59
PMS2-202ENST00000380416 ANP32CO43423 234 aa11.38□□□□□ -0.59
PMS2-202ENST00000380416 ST5P78524 1137 aa11.38□□□□□ -0.59
PMS2-202ENST00000380416 FKBP4Q02790 459 aaKnown RBP eCLIP11.38□□□□□ -0.59
PMS2-202ENST00000380416 CCDC93Q567U6 631 aa11.38□□□□□ -0.59
PMS2-202ENST00000380416 PRR5LQ6MZQ0 368 aa11.38□□□□□ -0.59
PMS2-202ENST00000380416 CLEC4GQ6UXB4 293 aa11.38□□□□□ -0.59
PMS2-202ENST00000380416 EFCAB3Q8N7B9 438 aa11.38□□□□□ -0.59
PMS2-202ENST00000380416 CNBD1Q8NA66 436 aa11.38□□□□□ -0.59
PMS2-202ENST00000380416 ZNF277Q9NRM2 450 aaPredicted RBP11.38□□□□□ -0.59
PMS2-202ENST00000380416 ERBB4Q15303 1308 aa11.37□□□□□ -0.59
PMS2-202ENST00000380416 CELF2O95319 508 aaKnown RBP11.37□□□□□ -0.59
PMS2-202ENST00000380416 SRGNP10124 158 aa11.37□□□□□ -0.59
PMS2-202ENST00000380416 SCNN1DP51172 638 aa11.37□□□□□ -0.59
PMS2-202ENST00000380416 KIF6Q6ZMV9 814 aa11.37□□□□□ -0.59
PMS2-202ENST00000380416 USP50Q70EL3 339 aaPredicted RBP11.37□□□□□ -0.59
PMS2-202ENST00000380416 NGEFQ8N5V2 710 aa11.37□□□□□ -0.59
PMS2-202ENST00000380416 LAS1LQ9Y4W2 734 aaKnown RBP11.37□□□□□ -0.59
PMS2-202ENST00000380416 COL4A5P29400 1685 aa11.36□□□□□ -0.59
PMS2-202ENST00000380416 MYL6BP14649 208 aa11.36□□□□□ -0.59
PMS2-202ENST00000380416 NBPF5PQ86XG9 351 aaPredicted RBP11.36□□□□□ -0.59
PMS2-202ENST00000380416 SLC17A8Q8NDX2 589 aa11.36□□□□□ -0.59
PMS2-202ENST00000380416 TRIM35Q9UPQ4 493 aa11.36□□□□□ -0.59
PMS2-202ENST00000380416 NIP7Q9Y221 180 aaKnown RBP eCLIP11.36□□□□□ -0.59
PMS2-202ENST00000380416 COL6A3P12111 3177 aa11.36□□□□□ -0.59
PMS2-202ENST00000380416 APAF1O14727 1248 aa11.35□□□□□ -0.59
PMS2-202ENST00000380416 EIF2S2P20042 333 aaKnown RBP11.35□□□□□ -0.59
PMS2-202ENST00000380416 LMOD1P29536 600 aaPredicted RBP11.35□□□□□ -0.59
PMS2-202ENST00000380416 EPS15P42566 896 aa11.35□□□□□ -0.59
PMS2-202ENST00000380416 CALD1Q05682 793 aaKnown RBP11.35□□□□□ -0.59
PMS2-202ENST00000380416 CCDC24Q8N4L8 307 aa11.35□□□□□ -0.59
PMS2-202ENST00000380416 MASTLQ96GX5 879 aa11.35□□□□□ -0.59
PMS2-202ENST00000380416 RBBP6Q7Z6E9 1792 aaKnown RBP11.35□□□□□ -0.59
PMS2-202ENST00000380416 SNED1Q8TER0 1413 aa11.35□□□□□ -0.59
PMS2-202ENST00000380416 MAP3K15Q6ZN16 1313 aa11.35□□□□□ -0.59
PMS2-202ENST00000380416 ERVV-1B6SEH8 477 aa11.34□□□□□ -0.59
PMS2-202ENST00000380416 CHL1O00533 1208 aa11.34□□□□□ -0.59
PMS2-202ENST00000380416 IARSP41252 1262 aaKnown RBP11.34□□□□□ -0.59
PMS2-202ENST00000380416 PKN2Q16513 984 aaKnown RBP11.34□□□□□ -0.59
PMS2-202ENST00000380416 MRS2Q9HD23 443 aa11.34□□□□□ -0.59
PMS2-202ENST00000380416 SCUBE2Q9NQ36 999 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms