RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 AFF2P51816 1311 aa24.08■■□□□ 1.45
PDLIM5-205ENST00000380180 IFIT5Q13325 482 aaKnown RBP24.08■■□□□ 1.44
PDLIM5-205ENST00000380180 FAM182BQ5T319 152 aa24.08■■□□□ 1.44
PDLIM5-205ENST00000380180 TTLL11Q8NHH1 800 aa24.08■■□□□ 1.44
PDLIM5-205ENST00000380180 RUFY2Q8WXA3 655 aa24.08■■□□□ 1.44
PDLIM5-205ENST00000380180 CAMTA2O94983 1202 aa24.07■■□□□ 1.44
PDLIM5-205ENST00000380180 TIMM10P62072 90 aa24.07■■□□□ 1.44
PDLIM5-205ENST00000380180 NEUROD6Q96NK8 337 aa24.07■■□□□ 1.44
PDLIM5-205ENST00000380180 PALD1Q9ULE6 856 aa24.07■■□□□ 1.44
PDLIM5-205ENST00000380180 FBXO3Q9UK99 471 aa24.06■■□□□ 1.44
PDLIM5-205ENST00000380180 NHSQ6T4R5 1651 aa24.06■■□□□ 1.44
PDLIM5-205ENST00000380180 CTSWP56202 376 aa24.06■■□□□ 1.44
PDLIM5-205ENST00000380180 KCNQ4P56696 695 aa24.06■■□□□ 1.44
PDLIM5-205ENST00000380180 ANAPC15P60006 121 aa24.06■■□□□ 1.44
PDLIM5-205ENST00000380180 LINC00116Q8NCU8 138 aa24.06■■□□□ 1.44
PDLIM5-205ENST00000380180 LSG1Q9H089 658 aaKnown RBP24.06■■□□□ 1.44
PDLIM5-205ENST00000380180 SBF2Q86WG5 1849 aa24.06■■□□□ 1.44
PDLIM5-205ENST00000380180 KIAA1211Q6ZU35 1233 aa24.05■■□□□ 1.44
PDLIM5-205ENST00000380180 HIP1O00291 1037 aa24.05■■□□□ 1.44
PDLIM5-205ENST00000380180 PDE8AO60658 829 aa24.05■■□□□ 1.44
PDLIM5-205ENST00000380180 TAF7LQ5H9L4 462 aa24.05■■□□□ 1.44
PDLIM5-205ENST00000380180 SUSD4Q5VX71 490 aa24.05■■□□□ 1.44
PDLIM5-205ENST00000380180 GREM2Q9H772 168 aa24.05■■□□□ 1.44
PDLIM5-205ENST00000380180 CEP126Q9P2H0 1117 aa24.05■■□□□ 1.44
PDLIM5-205ENST00000380180 RAD50Q92878 1312 aa24.04■■□□□ 1.44
PDLIM5-205ENST00000380180 ST18O60284 1047 aa24.04■■□□□ 1.44
PDLIM5-205ENST00000380180 HSPA4P34932 840 aa24.04■■□□□ 1.44
PDLIM5-205ENST00000380180 EDC3Q96F86 508 aaKnown RBP24.04■■□□□ 1.44
PDLIM5-205ENST00000380180 FSD1Q9BTV5 496 aa24.04■■□□□ 1.44
PDLIM5-205ENST00000380180 BCORQ6W2J9 1755 aa24.03■■□□□ 1.44
PDLIM5-205ENST00000380180 ITGA6P23229 1130 aa24.03■■□□□ 1.44
PDLIM5-205ENST00000380180 ZNF609O15014 1411 aa24.03■■□□□ 1.44
PDLIM5-205ENST00000380180 IL17RAQ96F46 866 aa24.03■■□□□ 1.44
PDLIM5-205ENST00000380180 A0A1B0GUL7 405 aa24.02■■□□□ 1.44
PDLIM5-205ENST00000380180 FAM227BQ96M60 508 aa24.02■■□□□ 1.44
PDLIM5-205ENST00000380180 CHMP5Q9NZZ3 219 aa24.02■■□□□ 1.44
PDLIM5-205ENST00000380180 NDUFB9Q9Y6M9 179 aa24.02■■□□□ 1.44
PDLIM5-205ENST00000380180 ONECUT3O60422 494 aaPredicted RBP24.01■■□□□ 1.43
PDLIM5-205ENST00000380180 HSP90AA1P07900 732 aaKnown RBP24.01■■□□□ 1.43
PDLIM5-205ENST00000380180 DDIT3P35638 169 aa24.01■■□□□ 1.43
PDLIM5-205ENST00000380180 NMIQ13287 307 aaPredicted RBP24.01■■□□□ 1.43
PDLIM5-205ENST00000380180 HAUS7Q99871 368 aa24.01■■□□□ 1.43
PDLIM5-205ENST00000380180 ATRNO75882 1429 aa24.01■■□□□ 1.43
PDLIM5-205ENST00000380180 ANKRD18BA2A2Z9 1011 aa24.01■■□□□ 1.43
PDLIM5-205ENST00000380180 FAM177BA6PVY3 158 aa24.01■■□□□ 1.43
PDLIM5-205ENST00000380180 NEK4P51957 841 aa24.01■■□□□ 1.43
PDLIM5-205ENST00000380180 UTP14AQ9BVJ6 771 aaKnown RBP24.01■■□□□ 1.43
PDLIM5-205ENST00000380180 TRPC5Q9UL62 973 aaPredicted RBP24.01■■□□□ 1.43
PDLIM5-205ENST00000380180 FRAT2O75474 233 aaPredicted RBP24■■□□□ 1.43
PDLIM5-205ENST00000380180 PARP10Q53GL7 1025 aa24■■□□□ 1.43
PDLIM5-205ENST00000380180 DNAJC2Q99543 621 aaKnown RBP24■■□□□ 1.43
PDLIM5-205ENST00000380180 SH3TC1Q8TE82 1336 aa24■■□□□ 1.43
PDLIM5-205ENST00000380180 LDHAL6AQ6ZMR3 332 aa24■■□□□ 1.43
PDLIM5-205ENST00000380180 AK7Q96M32 723 aa24■■□□□ 1.43
PDLIM5-205ENST00000380180 NIP7Q9Y221 180 aaKnown RBP eCLIP24■■□□□ 1.43
PDLIM5-205ENST00000380180 DDX60Q8IY21 1712 aaKnown RBP23.99■■□□□ 1.43
PDLIM5-205ENST00000380180 PTH1RQ03431 593 aa23.99■■□□□ 1.43
PDLIM5-205ENST00000380180 FOXD4L1Q9NU39 408 aa23.99■■□□□ 1.43
PDLIM5-205ENST00000380180 AKAP2Q9Y2D5 859 aa23.99■■□□□ 1.43
PDLIM5-205ENST00000380180 RIPOR2Q9Y4F9 1068 aa23.99■■□□□ 1.43
PDLIM5-205ENST00000380180 CNTNAP4Q9C0A0 1308 aa23.99■■□□□ 1.43
PDLIM5-205ENST00000380180 TAF1LQ8IZX4 1826 aa23.98■■□□□ 1.43
PDLIM5-205ENST00000380180 A0A0D9SFI3 127 aa23.98■■□□□ 1.43
PDLIM5-205ENST00000380180 HCLS1P14317 486 aaPredicted RBP23.98■■□□□ 1.43
PDLIM5-205ENST00000380180 ZNF652Q9Y2D9 606 aa23.98■■□□□ 1.43
PDLIM5-205ENST00000380180 LY75O60449 1722 aa23.97■■□□□ 1.43
PDLIM5-205ENST00000380180 SEPT12Q8IYM1 358 aa23.97■■□□□ 1.43
PDLIM5-205ENST00000380180 SNRKQ9NRH2 765 aa23.97■■□□□ 1.43
PDLIM5-205ENST00000380180 CLEC4GQ6UXB4 293 aa23.96■■□□□ 1.43
PDLIM5-205ENST00000380180 SNX14Q9Y5W7 946 aa23.96■■□□□ 1.43
PDLIM5-205ENST00000380180 LAMB2P55268 1798 aa23.95■■□□□ 1.42
PDLIM5-205ENST00000380180 NTSR2O95665 410 aa23.95■■□□□ 1.42
PDLIM5-205ENST00000380180 METTL24Q5JXM2 366 aa23.95■■□□□ 1.42
PDLIM5-205ENST00000380180 RC3H1Q5TC82 1133 aaKnown RBP23.95■■□□□ 1.42
PDLIM5-205ENST00000380180 DDX46Q7L014 1031 aaKnown RBP23.95■■□□□ 1.42
PDLIM5-205ENST00000380180 CNNM1Q9NRU3 951 aa23.95■■□□□ 1.42
PDLIM5-205ENST00000380180 CCDC171Q6TFL3 1326 aa23.95■■□□□ 1.42
PDLIM5-205ENST00000380180 RIC1Q4ADV7 1423 aa23.95■■□□□ 1.42
PDLIM5-205ENST00000380180 RASEFQ8IZ41 740 aa23.94■■□□□ 1.42
PDLIM5-205ENST00000380180 XAGE2Q96GT9 111 aa23.94■■□□□ 1.42
PDLIM5-205ENST00000380180 QTRT2Q9H974 415 aaKnown RBP23.94■■□□□ 1.42
PDLIM5-205ENST00000380180 CCNL1Q9UK58 526 aaPredicted RBP23.94■■□□□ 1.42
PDLIM5-205ENST00000380180 IFIT1P09914 478 aaKnown RBP23.94■■□□□ 1.42
PDLIM5-205ENST00000380180 ADORA1P30542 326 aa23.94■■□□□ 1.42
PDLIM5-205ENST00000380180 SMIM5Q71RC9 77 aa23.94■■□□□ 1.42
PDLIM5-205ENST00000380180 RFX7Q2KHR2 1363 aa23.94■■□□□ 1.42
PDLIM5-205ENST00000380180 KBTBD3Q8NAB2 608 aa23.93■■□□□ 1.42
PDLIM5-205ENST00000380180 UPF3BQ9BZI7 483 aaKnown RBP23.93■■□□□ 1.42
PDLIM5-205ENST00000380180 PAG1Q9NWQ8 432 aa23.93■■□□□ 1.42
PDLIM5-205ENST00000380180 CIZ1Q9ULV3 898 aaPredicted RBP23.93■■□□□ 1.42
PDLIM5-205ENST00000380180 SPEF2Q9C093 1822 aa23.93■■□□□ 1.42
PDLIM5-205ENST00000380180 GOLIM4O00461 696 aa23.93■■□□□ 1.42
PDLIM5-205ENST00000380180 CCDC158Q5M9N0 1113 aa23.93■■□□□ 1.42
PDLIM5-205ENST00000380180 GORABQ5T7V8 394 aa23.93■■□□□ 1.42
PDLIM5-205ENST00000380180 MAP4K1Q92918 833 aa23.93■■□□□ 1.42
PDLIM5-205ENST00000380180 MED23Q9ULK4 1368 aa23.93■■□□□ 1.42
PDLIM5-205ENST00000380180 RPS6KA4O75676 772 aa23.92■■□□□ 1.42
PDLIM5-205ENST00000380180 MCM2P49736 904 aa23.92■■□□□ 1.42
PDLIM5-205ENST00000380180 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.92■■□□□ 1.42
PDLIM5-205ENST00000380180 CHGBP05060 677 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms