RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 USO1O60763 962 aaKnown RBP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 IARSP41252 1262 aaKnown RBP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 UBE3BQ7Z3V4 1068 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 FAM107BQ9H098 131 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 PZPP20742 1482 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 URB2Q14146 1524 aaKnown RBP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 ZEB2O60315 1214 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 NR1I2O75469 434 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 SLC4A8Q2Y0W8 1093 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 METTL24Q5JXM2 366 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 FKBP15Q5T1M5 1219 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 RPGRIP1LQ68CZ1 1315 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 ANXA1P04083 346 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 ZC3H6P61129 1189 aaKnown RBP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 PHACTR3Q96KR7 559 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 ZNF500O60304 480 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 SSBP05455 408 aaKnown RBP eCLIP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 IFFO1Q0D2I5 559 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 ARHGEF12Q9NZN5 1544 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 POLR3AO14802 1390 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 TMCO5BA8MYB1 307 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 USP5P45974 858 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 PIP4K2BP78356 416 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 IDI1Q13907 227 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 CCDC96Q2M329 555 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 DNAJC21Q5F1R6 531 aaKnown RBP4.82□□□□□ -1.64
BRCA2-201ENST00000380152 USP16Q9Y5T5 823 aa4.82□□□□□ -1.64
BRCA2-201ENST00000380152 RHOXF2BP0C7M4 288 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 RHOXF2Q9BQY4 288 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 IFT140Q96RY7 1462 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 MICALCLQ6ZW33 695 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 IQCA1Q86XH1 822 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 LRRC8AQ8IWT6 810 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 PPP1R9BQ96SB3 815 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 RASSF4Q9H2L5 321 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 CCDC175P0C221 793 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 OTUD7AQ8TE49 926 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-201ENST00000380152 HMG20BQ9P0W2 317 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 FSD2A1L4K1 749 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 IRX3P78415 501 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-201ENST00000380152 MCMDC2Q4G0Z9 681 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 KANK3Q6NY19 840 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 STRN4Q9NRL3 753 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 YEATS4O95619 227 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 ELF2Q15723 593 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 CREB3L3Q68CJ9 461 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 POLKQ9UBT6 870 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 PA2G4Q9UQ80 394 aaKnown RBP4.81□□□□□ -1.64
BRCA2-201ENST00000380152 ATP5J2-PTCD1G3V325 749 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 GRM8O00222 908 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 HSF2BPO75031 334 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 GBP2P32456 591 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-201ENST00000380152 EVCP57679 992 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 TTC31Q49AM3 519 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-201ENST00000380152 TMEM67Q5HYA8 995 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 TOM1L2Q6ZVM7 507 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 TCOF1Q13428 1488 aaKnown RBP4.81□□□□□ -1.64
BRCA2-201ENST00000380152 CEP112Q8N8E3 955 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 GOLGA1Q92805 767 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 DRC1Q96MC2 740 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 C14orf93Q9H972 538 aaKnown RBP4.81□□□□□ -1.64
BRCA2-201ENST00000380152 KARSQ15046 597 aaKnown RBP4.81□□□□□ -1.64
BRCA2-201ENST00000380152 BAG1Q99933 345 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-201ENST00000380152 SLC26A6Q9BXS9 759 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 GSPT1P15170 499 aaKnown RBP4.81□□□□□ -1.64
BRCA2-201ENST00000380152 ALG1Q9BT22 464 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 HYPKQ9NX55 129 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 TRIM35Q9UPQ4 493 aa4.81□□□□□ -1.64
BRCA2-201ENST00000380152 CTDP1Q9Y5B0 961 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-201ENST00000380152 TERF1P54274 439 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 APOBRQ0VD83 1088 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 PRPF4BQ13523 1007 aaKnown RBP4.8□□□□□ -1.64
BRCA2-201ENST00000380152 ADGRL1O94910 1474 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 POTEB2H3BUK9 544 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 RXRAP19793 462 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 NLRP5P59047 1200 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 SOGA3Q5TF21 947 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 ANTXR1Q9H6X2 564 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 SPATA31E1Q6ZUB1 1445 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 CTAGE1Q96RT6 745 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 NAA15Q9BXJ9 866 aaKnown RBP4.8□□□□□ -1.64
BRCA2-201ENST00000380152 MKNK2Q9HBH9 465 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 BMP2KQ9NSY1 1161 aaPredicted RBP4.8□□□□□ -1.64
BRCA2-201ENST00000380152 GUCA1BQ9UMX6 200 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 WASLO00401 505 aaPredicted RBP4.8□□□□□ -1.64
BRCA2-201ENST00000380152 CD2BP2O95400 341 aaKnown RBP4.8□□□□□ -1.64
BRCA2-201ENST00000380152 NCOA7Q8NI08 942 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 GRIN2AQ12879 1464 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 WDR62O43379 1518 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 RANBP6O60518 1105 aaKnown RBP4.8□□□□□ -1.64
BRCA2-201ENST00000380152 NOP2P46087 812 aaKnown RBP4.8□□□□□ -1.64
BRCA2-201ENST00000380152 OSCARQ8IYS5 282 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 N4BP3O15049 544 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 IFIT5Q13325 482 aaKnown RBP4.8□□□□□ -1.64
BRCA2-201ENST00000380152 TAF4BQ92750 862 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 ORC3Q9UBD5 711 aaPredicted RBP4.8□□□□□ -1.64
BRCA2-201ENST00000380152 VIRMAQ69YN4 1812 aaKnown RBP4.8□□□□□ -1.64
BRCA2-201ENST00000380152 MAP2P11137 1827 aaKnown RBP4.8□□□□□ -1.64
BRCA2-201ENST00000380152 CTAGE15A4D2H0 777 aa4.8□□□□□ -1.64
BRCA2-201ENST00000380152 SPTLC2O15270 562 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms