RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 LRRN4CLQ8ND94 238 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 FAXDC2Q96IV6 333 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 AK7Q96M32 723 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 EMILIN1Q9Y6C2 1016 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 TUBGCP6Q96RT7 1819 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 PXDNLA1KZ92 1463 aa8.79□□□□□ -1
CDKL5-201ENST00000379989 LTN1O94822 1766 aa8.78□□□□□ -1
CDKL5-201ENST00000379989 CALRP27797 417 aaKnown RBP8.78□□□□□ -1
CDKL5-201ENST00000379989 EXOSC9Q06265 439 aaKnown RBP8.78□□□□□ -1
CDKL5-201ENST00000379989 USP48Q86UV5 1035 aa8.78□□□□□ -1
CDKL5-201ENST00000379989 EXOC4Q96A65 974 aa8.78□□□□□ -1
CDKL5-201ENST00000379989 LMO7Q8WWI1 1683 aa8.78□□□□□ -1
CDKL5-201ENST00000379989 CHL1O00533 1208 aa8.78□□□□□ -1
CDKL5-201ENST00000379989 MPHOSPH10O00566 681 aaKnown RBP8.78□□□□□ -1
CDKL5-201ENST00000379989 TTC19Q6DKK2 380 aaPredicted RBP8.78□□□□□ -1
CDKL5-201ENST00000379989 ZNF526Q8TF50 670 aaPredicted RBP8.78□□□□□ -1
CDKL5-201ENST00000379989 H0YHG0 523 aa8.78□□□□□ -1
CDKL5-201ENST00000379989 IVLP07476 585 aa8.78□□□□□ -1
CDKL5-201ENST00000379989 SARNPP82979 210 aaKnown RBP8.78□□□□□ -1
CDKL5-201ENST00000379989 PSME1Q06323 249 aa8.78□□□□□ -1
CDKL5-201ENST00000379989 CHD1LQ86WJ1 897 aa8.78□□□□□ -1
CDKL5-201ENST00000379989 PDRG1Q9NUG6 133 aa8.78□□□□□ -1
CDKL5-201ENST00000379989 ADAM21Q9UKJ8 722 aa8.78□□□□□ -1
CDKL5-201ENST00000379989 ALS2Q96Q42 1657 aa8.78□□□□□ -1
CDKL5-201ENST00000379989 ANKRD65E5RJM6 399 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 SASH3O75995 380 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 ABCC4O15439 1325 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 MAP3K19Q56UN5 1328 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 PTPN14Q15678 1187 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 FOXD4L6Q3SYB3 417 aaPredicted RBP8.77□□□□□ -1.01
CDKL5-201ENST00000379989 NAIF1Q69YI7 327 aaPredicted RBP8.77□□□□□ -1.01
CDKL5-201ENST00000379989 TMCO3Q6UWJ1 677 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 FOXD4L3Q6VB84 417 aaPredicted RBP8.77□□□□□ -1.01
CDKL5-201ENST00000379989 CACTINQ8WUQ7 758 aaKnown RBP8.77□□□□□ -1.01
CDKL5-201ENST00000379989 IP6K1Q92551 441 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 GCC1Q96CN9 775 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 MSH6P52701 1360 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 CCDC171Q6TFL3 1326 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 LTBP4Q8N2S1 1624 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 VAMP4O75379 141 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 SEC31AO94979 1220 aaKnown RBP8.77□□□□□ -1.01
CDKL5-201ENST00000379989 ARHGAP29Q52LW3 1261 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 TTLL5Q6EMB2 1281 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 CWC27Q6UX04 472 aaKnown RBP8.77□□□□□ -1.01
CDKL5-201ENST00000379989 C19orf44Q9H6X5 657 aa8.77□□□□□ -1.01
CDKL5-201ENST00000379989 ADAMTS7Q9UKP4 1686 aa8.76□□□□□ -1.01
CDKL5-201ENST00000379989 CRB1P82279 1406 aa8.76□□□□□ -1.01
CDKL5-201ENST00000379989 SMC2O95347 1197 aa8.76□□□□□ -1.01
CDKL5-201ENST00000379989 ARID4AP29374 1257 aaPredicted RBP8.76□□□□□ -1.01
CDKL5-201ENST00000379989 SMC1AQ14683 1233 aaKnown RBP8.76□□□□□ -1.01
CDKL5-201ENST00000379989 ZNF513Q8N8E2 541 aaPredicted RBP8.76□□□□□ -1.01
CDKL5-201ENST00000379989 DNAAF4Q8WXU2 420 aa8.76□□□□□ -1.01
CDKL5-201ENST00000379989 RRP7AQ9Y3A4 280 aaKnown RBP8.76□□□□□ -1.01
CDKL5-201ENST00000379989 ANKRD33BA6NCL7 494 aa8.76□□□□□ -1.01
CDKL5-201ENST00000379989 C21orf2O43822 256 aa8.76□□□□□ -1.01
CDKL5-201ENST00000379989 AMPHP49418 695 aa8.76□□□□□ -1.01
CDKL5-201ENST00000379989 NEUROD2Q15784 382 aa8.76□□□□□ -1.01
CDKL5-201ENST00000379989 AMOTQ4VCS5 1084 aa8.76□□□□□ -1.01
CDKL5-201ENST00000379989 GIMAP6Q6P9H5 292 aa8.76□□□□□ -1.01
CDKL5-201ENST00000379989 LEKR1Q6ZMV7 388 aa8.76□□□□□ -1.01
CDKL5-201ENST00000379989 MIEF2Q96C03 454 aa8.76□□□□□ -1.01
CDKL5-201ENST00000379989 SRRTQ9BXP5 876 aaKnown RBP8.76□□□□□ -1.01
CDKL5-201ENST00000379989 KIF2AO00139 706 aaPredicted RBP8.75□□□□□ -1.01
CDKL5-201ENST00000379989 ST18O60284 1047 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 TBC1D8O95759 1140 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 LIG1P18858 919 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 PLEKHO1Q53GL0 409 aaPredicted RBP8.75□□□□□ -1.01
CDKL5-201ENST00000379989 MRPL50Q8N5N7 158 aaKnown RBP8.75□□□□□ -1.01
CDKL5-201ENST00000379989 SSH1Q8WYL5 1049 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 L2HGDHQ9H9P8 463 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 CDC45O75419 566 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 MNAT1P51948 309 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 ATP8B1O43520 1251 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 RPS6KA5O75582 802 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 TPM1P09493 284 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 CASTP20810 708 aaKnown RBP8.75□□□□□ -1.01
CDKL5-201ENST00000379989 RBM5P52756 815 aaKnown RBP eCLIP8.75□□□□□ -1.01
CDKL5-201ENST00000379989 TADA2BQ86TJ2 420 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 EFCAB13Q8IY85 973 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 ZBTB40Q9NUA8 1239 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 MRVI1Q9Y6F6 885 aa8.75□□□□□ -1.01
CDKL5-201ENST00000379989 HOXC9P31274 260 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 NLRP6P59044 892 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 SETQ01105 290 aaPredicted RBP8.74□□□□□ -1.01
CDKL5-201ENST00000379989 TWISTNBQ3B726 338 aaPredicted RBP8.74□□□□□ -1.01
CDKL5-201ENST00000379989 DRC7Q8IY82 874 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 KAT2BQ92831 832 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 CCDC34Q96HJ3 373 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 SLC24A3Q9HC58 644 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 RPS6KL1Q9Y6S9 549 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 C1orf167Q5SNV9 1468 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 MAP3K5Q99683 1374 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 TRIM27P14373 513 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 CCDC144BQ3MJ40 725 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 TPRNQ4KMQ1 711 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 INTS3Q68E01 1043 aaKnown RBP8.74□□□□□ -1.01
CDKL5-201ENST00000379989 SULT6B1Q6IMI4 303 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 CCDC144CPQ8IYA2 1237 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 TMEM87AQ8NBN3 555 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 ARGLU1Q9NWB6 273 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms