RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 PUS3Q9BZE2 481 aaKnown RBP17.87■□□□□ 0.45
PRNP-201ENST00000379440 HLFQ16534 295 aa17.86■□□□□ 0.45
PRNP-201ENST00000379440 ZNF589Q86UQ0 364 aaPredicted RBP17.86■□□□□ 0.45
PRNP-201ENST00000379440 MAP4K1Q92918 833 aa17.86■□□□□ 0.45
PRNP-201ENST00000379440 JAKMIP1Q96N16 626 aaKnown RBP17.86■□□□□ 0.45
PRNP-201ENST00000379440 AHDC1Q5TGY3 1603 aaPredicted RBP17.86■□□□□ 0.45
PRNP-201ENST00000379440 KCNJ4P48050 445 aa17.86■□□□□ 0.45
PRNP-201ENST00000379440 PRIM1P49642 420 aaKnown RBP17.86■□□□□ 0.45
PRNP-201ENST00000379440 SKOR2Q2VWA4 1001 aaPredicted RBP17.85■□□□□ 0.45
PRNP-201ENST00000379440 RUFY3Q7L099 469 aa17.85■□□□□ 0.45
PRNP-201ENST00000379440 EYA2O00167 538 aa17.85■□□□□ 0.45
PRNP-201ENST00000379440 CYP19A1P11511 503 aaPredicted RBP17.85■□□□□ 0.45
PRNP-201ENST00000379440 CREB3L3Q68CJ9 461 aa17.85■□□□□ 0.45
PRNP-201ENST00000379440 SYNE4Q8N205 404 aa17.85■□□□□ 0.45
PRNP-201ENST00000379440 KCNB2Q92953 911 aa17.85■□□□□ 0.45
PRNP-201ENST00000379440 SNRKQ9NRH2 765 aa17.85■□□□□ 0.45
PRNP-201ENST00000379440 GOLGA6L3A6NEY3 463 aa17.85■□□□□ 0.45
PRNP-201ENST00000379440 PTMSP20962 102 aa17.85■□□□□ 0.45
PRNP-201ENST00000379440 GPTP24298 496 aa17.85■□□□□ 0.45
PRNP-201ENST00000379440 IL15P40933 162 aaPredicted RBP17.85■□□□□ 0.45
PRNP-201ENST00000379440 DDX46Q7L014 1031 aaKnown RBP17.85■□□□□ 0.45
PRNP-201ENST00000379440 FSD2A1L4K1 749 aa17.84■□□□□ 0.45
PRNP-201ENST00000379440 COL9A3Q14050 684 aaPredicted RBP17.84■□□□□ 0.45
PRNP-201ENST00000379440 HAUS7Q99871 368 aa17.84■□□□□ 0.45
PRNP-201ENST00000379440 ZBTB1Q9Y2K1 713 aa17.84■□□□□ 0.45
PRNP-201ENST00000379440 COL22A1Q8NFW1 1626 aaPredicted RBP17.84■□□□□ 0.45
PRNP-201ENST00000379440 MAP3K15Q6ZN16 1313 aa17.84■□□□□ 0.45
PRNP-201ENST00000379440 TRIM28Q13263 835 aaKnown RBP17.84■□□□□ 0.45
PRNP-201ENST00000379440 MED23Q9ULK4 1368 aa17.83■□□□□ 0.45
PRNP-201ENST00000379440 A0A0G2JS52 829 aa17.83■□□□□ 0.44
PRNP-201ENST00000379440 GIGYF2Q6Y7W6 1299 aaKnown RBP17.83■□□□□ 0.44
PRNP-201ENST00000379440 ZSWIM6Q9HCJ5 1215 aa17.83■□□□□ 0.44
PRNP-201ENST00000379440 LIMCH1Q9UPQ0 1083 aa17.83■□□□□ 0.44
PRNP-201ENST00000379440 DDX49Q9Y6V7 483 aaKnown RBP17.83■□□□□ 0.44
PRNP-201ENST00000379440 NUTM2BA6NNL0 878 aaPredicted RBP17.83■□□□□ 0.44
PRNP-201ENST00000379440 NUTM2EB1AL46 878 aaPredicted RBP17.83■□□□□ 0.44
PRNP-201ENST00000379440 SLC27A2O14975 620 aa17.83■□□□□ 0.44
PRNP-201ENST00000379440 BRD1O95696 1058 aa17.83■□□□□ 0.44
PRNP-201ENST00000379440 ZKSCAN1P17029 563 aaPredicted RBP17.83■□□□□ 0.44
PRNP-201ENST00000379440 NUTM2AQ8IVF1 878 aaPredicted RBP17.83■□□□□ 0.44
PRNP-201ENST00000379440 SEC62Q99442 399 aaKnown RBP17.83■□□□□ 0.44
PRNP-201ENST00000379440 PDRG1Q9NUG6 133 aa17.83■□□□□ 0.44
PRNP-201ENST00000379440 LMBRD1Q9NUN5 540 aa17.83■□□□□ 0.44
PRNP-201ENST00000379440 TAF6LQ9Y6J9 622 aa17.83■□□□□ 0.44
PRNP-201ENST00000379440 LARGE1O95461 756 aa17.82■□□□□ 0.44
PRNP-201ENST00000379440 PCCAP05165 728 aaPredicted RBP17.82■□□□□ 0.44
PRNP-201ENST00000379440 CCDC57Q2TAC2 916 aa17.82■□□□□ 0.44
PRNP-201ENST00000379440 L1TD1Q5T7N2 865 aaKnown RBP17.82■□□□□ 0.44
PRNP-201ENST00000379440 CCDC129Q6ZRS4 1044 aa17.82■□□□□ 0.44
PRNP-201ENST00000379440 ZBTB38Q8NAP3 1195 aaPredicted RBP17.82■□□□□ 0.44
PRNP-201ENST00000379440 DTNBO60941 627 aa17.81■□□□□ 0.44
PRNP-201ENST00000379440 TAF5LO75529 589 aa17.81■□□□□ 0.44
PRNP-201ENST00000379440 TM6SF1Q9BZW5 370 aa17.81■□□□□ 0.44
PRNP-201ENST00000379440 CYP46A1Q9Y6A2 500 aa17.81■□□□□ 0.44
PRNP-201ENST00000379440 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.81■□□□□ 0.44
PRNP-201ENST00000379440 A0A1B0GUL7 405 aa17.81■□□□□ 0.44
PRNP-201ENST00000379440 PRPF40AO75400 957 aaKnown RBP17.81■□□□□ 0.44
PRNP-201ENST00000379440 XRCC6P12956 609 aaKnown RBP eCLIP17.81■□□□□ 0.44
PRNP-201ENST00000379440 SLFNL1Q499Z3 407 aa17.81■□□□□ 0.44
PRNP-201ENST00000379440 ACSBG1Q96GR2 724 aa17.81■□□□□ 0.44
PRNP-201ENST00000379440 GPR108Q9NPR9 543 aa17.81■□□□□ 0.44
PRNP-201ENST00000379440 SPATA31A1Q5TZJ5 1347 aa17.8■□□□□ 0.44
PRNP-201ENST00000379440 GOLIM4O00461 696 aa17.8■□□□□ 0.44
PRNP-201ENST00000379440 CIAO1O76071 339 aa17.8■□□□□ 0.44
PRNP-201ENST00000379440 VPS53Q5VIR6 699 aa17.8■□□□□ 0.44
PRNP-201ENST00000379440 TBC1D2BQ9UPU7 963 aa17.8■□□□□ 0.44
PRNP-201ENST00000379440 LTBP4Q8N2S1 1624 aa17.8■□□□□ 0.44
PRNP-201ENST00000379440 DDB1Q16531 1140 aa17.8■□□□□ 0.44
PRNP-201ENST00000379440 KLHL40Q2TBA0 621 aa17.8■□□□□ 0.44
PRNP-201ENST00000379440 NLRP10Q86W26 655 aa17.8■□□□□ 0.44
PRNP-201ENST00000379440 NAP1L5Q96NT1 182 aaPredicted RBP17.8■□□□□ 0.44
PRNP-201ENST00000379440 ZNF609O15014 1411 aa17.8■□□□□ 0.44
PRNP-201ENST00000379440 PLCH1Q4KWH8 1693 aa17.8■□□□□ 0.44
PRNP-201ENST00000379440 GAS2L3Q86XJ1 694 aa17.79■□□□□ 0.44
PRNP-201ENST00000379440 KBTBD3Q8NAB2 608 aa17.79■□□□□ 0.44
PRNP-201ENST00000379440 CEP126Q9P2H0 1117 aa17.79■□□□□ 0.44
PRNP-201ENST00000379440 CSF1RP07333 972 aa17.78■□□□□ 0.44
PRNP-201ENST00000379440 NCLP19338 710 aaKnown RBP17.78■□□□□ 0.44
PRNP-201ENST00000379440 PIP4K2BP78356 416 aa17.78■□□□□ 0.44
PRNP-201ENST00000379440 FOXD4L6Q3SYB3 417 aaPredicted RBP17.78■□□□□ 0.44
PRNP-201ENST00000379440 FOXD4L3Q6VB84 417 aaPredicted RBP17.78■□□□□ 0.44
PRNP-201ENST00000379440 TCEANC2Q96MN5 208 aa17.78■□□□□ 0.44
PRNP-201ENST00000379440 PAG1Q9NWQ8 432 aa17.78■□□□□ 0.44
PRNP-201ENST00000379440 LRP6O75581 1613 aa17.78■□□□□ 0.44
PRNP-201ENST00000379440 PLA2G12BQ9BX93 195 aa17.78■□□□□ 0.44
PRNP-201ENST00000379440 PRDM4Q9UKN5 801 aa17.78■□□□□ 0.44
PRNP-201ENST00000379440 CCDC83Q8IWF9 413 aa17.77■□□□□ 0.44
PRNP-201ENST00000379440 RPAP1Q9BWH6 1393 aaPredicted RBP17.77■□□□□ 0.44
PRNP-201ENST00000379440 JCADQ9P266 1359 aa17.77■□□□□ 0.44
PRNP-201ENST00000379440 IFIT5Q13325 482 aaKnown RBP17.77■□□□□ 0.44
PRNP-201ENST00000379440 MCMDC2Q4G0Z9 681 aa17.77■□□□□ 0.44
PRNP-201ENST00000379440 RNF20Q5VTR2 975 aa17.77■□□□□ 0.44
PRNP-201ENST00000379440 DZIP3Q86Y13 1208 aaKnown RBP17.77■□□□□ 0.44
PRNP-201ENST00000379440 DHX37Q8IY37 1157 aaKnown RBP17.77■□□□□ 0.44
PRNP-201ENST00000379440 MARCH10Q8NA82 808 aaPredicted RBP17.77■□□□□ 0.44
PRNP-201ENST00000379440 PANK2Q9BZ23 570 aa17.77■□□□□ 0.44
PRNP-201ENST00000379440 IFIT1P09914 478 aaKnown RBP17.76■□□□□ 0.43
PRNP-201ENST00000379440 ADORA1P30542 326 aa17.76■□□□□ 0.43
PRNP-201ENST00000379440 PHLPP1O60346 1717 aa17.76■□□□□ 0.43
PRNP-201ENST00000379440 DOT1LQ8TEK3 1739 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms