RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 CFAP65Q6ZU64 1925 aaKnown RBP12.94□□□□□ -0.34
ITM2B-202ENST00000378565 GCKP35557 465 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 MAP7Q14244 749 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 PPP2R3AQ06190 1150 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 CFAP157Q5JU67 520 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 DZIP1Q86YF9 867 aaKnown RBP12.94□□□□□ -0.34
ITM2B-202ENST00000378565 ERO1AQ96HE7 468 aa12.94□□□□□ -0.34
ITM2B-202ENST00000378565 ZSCAN22P10073 491 aaPredicted RBP12.93□□□□□ -0.34
ITM2B-202ENST00000378565 STMN1P16949 149 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 PDE1CQ14123 709 aaPredicted RBP12.93□□□□□ -0.34
ITM2B-202ENST00000378565 NAPBQ9H115 298 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 NKIRAS1Q9NYS0 192 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 IDH1O75874 414 aaKnown RBP12.93□□□□□ -0.34
ITM2B-202ENST00000378565 GOLGA6CA6NDK9 693 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 GOLGA6DP0CG33 693 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 GOLGA6AQ9NYA3 693 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 EPSTI1Q96J88 318 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 GUCY1B3Q02153 619 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 ANKRD50Q9ULJ7 1429 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 CCDC170Q8IYT3 715 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 IFT81Q8WYA0 676 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 PSMD1Q99460 953 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 FYB2Q5VWT5 728 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 GSTA5Q7RTV2 222 aa12.93□□□□□ -0.34
ITM2B-202ENST00000378565 SLFN5Q08AF3 891 aa12.92□□□□□ -0.34
ITM2B-202ENST00000378565 RBBP5Q15291 538 aaKnown RBP12.92□□□□□ -0.34
ITM2B-202ENST00000378565 LRRC27Q9C0I9 530 aa12.92□□□□□ -0.34
ITM2B-202ENST00000378565 HPDP32754 393 aaPredicted RBP12.92□□□□□ -0.34
ITM2B-202ENST00000378565 HMG20BQ9P0W2 317 aa12.92□□□□□ -0.34
ITM2B-202ENST00000378565 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
ITM2B-202ENST00000378565 CCDC144CPQ8IYA2 1237 aa12.92□□□□□ -0.34
ITM2B-202ENST00000378565 TRHP20396 242 aaPredicted RBP12.92□□□□□ -0.34
ITM2B-202ENST00000378565 ARL1P40616 181 aaPredicted RBP12.92□□□□□ -0.34
ITM2B-202ENST00000378565 GBP5Q96PP8 586 aa12.92□□□□□ -0.34
ITM2B-202ENST00000378565 GPRASP1Q5JY77 1395 aa12.92□□□□□ -0.34
ITM2B-202ENST00000378565 ATP6V1AP38606 617 aa12.92□□□□□ -0.34
ITM2B-202ENST00000378565 FAM160A1Q05DH4 1040 aa12.92□□□□□ -0.34
ITM2B-202ENST00000378565 MCUR1Q96AQ8 359 aa12.92□□□□□ -0.34
ITM2B-202ENST00000378565 TNNC1P63316 161 aa12.92□□□□□ -0.34
ITM2B-202ENST00000378565 TYRO3Q06418 890 aa12.92□□□□□ -0.34
ITM2B-202ENST00000378565 CCDC62Q6P9F0 684 aa12.92□□□□□ -0.34
ITM2B-202ENST00000378565 UBLCP1Q8WVY7 318 aaPredicted RBP12.92□□□□□ -0.34
ITM2B-202ENST00000378565 ALDH1L2Q3SY69 923 aa12.91□□□□□ -0.34
ITM2B-202ENST00000378565 ISM2Q6H9L7 571 aa12.91□□□□□ -0.34
ITM2B-202ENST00000378565 IQCA1Q86XH1 822 aa12.91□□□□□ -0.34
ITM2B-202ENST00000378565 TFIP11Q9UBB9 837 aaKnown RBP12.91□□□□□ -0.34
ITM2B-202ENST00000378565 PRIM1P49642 420 aaKnown RBP12.91□□□□□ -0.34
ITM2B-202ENST00000378565 TERF1P54274 439 aa12.91□□□□□ -0.34
ITM2B-202ENST00000378565 ARHGAP24Q8N264 748 aa12.91□□□□□ -0.34
ITM2B-202ENST00000378565 SPAG5Q96R06 1193 aa12.91□□□□□ -0.34
ITM2B-202ENST00000378565 ODF2LQ9ULJ1 636 aa12.91□□□□□ -0.34
ITM2B-202ENST00000378565 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.91□□□□□ -0.344e-6■□□□□ 8.8
ITM2B-202ENST00000378565 UBA7P41226 1012 aa12.91□□□□□ -0.34
ITM2B-202ENST00000378565 TSPYL2Q9H2G4 693 aaPredicted RBP12.91□□□□□ -0.34
ITM2B-202ENST00000378565 KCNK9Q9NPC2 374 aa12.91□□□□□ -0.34
ITM2B-202ENST00000378565 CNPY2Q9Y2B0 182 aa12.91□□□□□ -0.34
ITM2B-202ENST00000378565 PTGS1P23219 599 aa12.91□□□□□ -0.34
ITM2B-202ENST00000378565 TTC36A6NLP5 189 aa12.91□□□□□ -0.34
ITM2B-202ENST00000378565 AOPEPQ8N6M6 819 aa12.91□□□□□ -0.34
ITM2B-202ENST00000378565 RNF41Q9H4P4 317 aaPredicted RBP12.91□□□□□ -0.34
ITM2B-202ENST00000378565 VIMP08670 466 aaKnown RBP12.91□□□□□ -0.34
ITM2B-202ENST00000378565 PDS5BQ9NTI5 1447 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 GIGYF1O75420 1035 aaPredicted RBP12.9□□□□□ -0.34
ITM2B-202ENST00000378565 ERCC6LQ2NKX8 1250 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 SYCP3Q8IZU3 236 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 MYRIPQ8NFW9 859 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 SYNCQ9H7C4 482 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 CCT2P78371 535 aaKnown RBP12.9□□□□□ -0.34
ITM2B-202ENST00000378565 USP48Q86UV5 1035 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 RNF10Q8N5U6 811 aaKnown RBP12.9□□□□□ -0.34
ITM2B-202ENST00000378565 KIAA1524Q8TCG1 905 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 GUCA1BQ9UMX6 200 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 SMIM23A6NLE4 172 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 TUBB2AQ13885 445 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 CCDC14Q49A88 953 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 TUBB2BQ9BVA1 445 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 EVCP57679 992 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 CHMP4BP1P59074 171 aa12.9□□□□□ -0.34
ITM2B-202ENST00000378565 LUC7L3O95232 432 aaKnown RBP12.9□□□□□ -0.34
ITM2B-202ENST00000378565 PPFIA2O75334 1257 aa12.89□□□□□ -0.35
ITM2B-202ENST00000378565 BMP15O95972 392 aa12.89□□□□□ -0.35
ITM2B-202ENST00000378565 RTL1A6NKG5 1358 aa12.89□□□□□ -0.35
ITM2B-202ENST00000378565 LZTFL1Q9NQ48 299 aa12.89□□□□□ -0.35
ITM2B-202ENST00000378565 MYL6BP14649 208 aa12.89□□□□□ -0.35
ITM2B-202ENST00000378565 GKAP1Q5VSY0 366 aaPredicted RBP12.89□□□□□ -0.35
ITM2B-202ENST00000378565 PUF60Q9UHX1 559 aaKnown RBP12.89□□□□□ -0.35
ITM2B-202ENST00000378565 CNGA4Q8IV77 575 aa12.89□□□□□ -0.35
ITM2B-202ENST00000378565 CUL5Q93034 780 aa12.89□□□□□ -0.35
ITM2B-202ENST00000378565 NLRP6P59044 892 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 RPAINQ86UA6 219 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 MICAL1Q8TDZ2 1067 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 POLR3DP05423 398 aaPredicted RBP12.88□□□□□ -0.35
ITM2B-202ENST00000378565 ERCC3P19447 782 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 CCDC42Q96M95 316 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 ARHGAP5Q13017 1502 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 STAT6P42226 847 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 MRPS27Q92552 414 aaKnown RBP12.88□□□□□ -0.35
ITM2B-202ENST00000378565 TXNDC16Q9P2K2 825 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 SETD1BQ9UPS6 1966 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms