RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 ZNF219Q9P2Y4 722 aaPredicted RBP25.26■■□□□ 1.63
RER1-204ENST00000378518 ABCC4O15439 1325 aa25.26■■□□□ 1.63
RER1-204ENST00000378518 C21orf2O43822 256 aa25.25■■□□□ 1.63
RER1-204ENST00000378518 ARHGAP27Q6ZUM4 889 aa25.25■■□□□ 1.63
RER1-204ENST00000378518 FER1L6Q2WGJ9 1857 aa25.25■■□□□ 1.63
RER1-204ENST00000378518 PPEF1O14829 653 aaPredicted RBP25.24■■□□□ 1.63
RER1-204ENST00000378518 GRAPQ13588 217 aa25.24■■□□□ 1.63
RER1-204ENST00000378518 GRAPLQ8TC17 118 aaPredicted RBP25.24■■□□□ 1.63
RER1-204ENST00000378518 TMX4Q9H1E5 349 aaPredicted RBP25.24■■□□□ 1.63
RER1-204ENST00000378518 FTSJ3Q8IY81 847 aaKnown RBP25.23■■□□□ 1.63
RER1-204ENST00000378518 UTYO14607 1347 aa25.22■■□□□ 1.63
RER1-204ENST00000378518 BBOX1O75936 387 aa25.22■■□□□ 1.63
RER1-204ENST00000378518 CCDC93Q567U6 631 aa25.22■■□□□ 1.63
RER1-204ENST00000378518 INTS3Q68E01 1043 aaKnown RBP25.22■■□□□ 1.63
RER1-204ENST00000378518 CLUAP1Q96AJ1 413 aa25.22■■□□□ 1.63
RER1-204ENST00000378518 SPEF2Q9C093 1822 aa25.21■■□□□ 1.63
RER1-204ENST00000378518 CC2D2BQ6DHV5 1058 aa25.21■■□□□ 1.63
RER1-204ENST00000378518 TMC4Q7Z404 712 aa25.21■■□□□ 1.63
RER1-204ENST00000378518 TTLL11Q8NHH1 800 aa25.21■■□□□ 1.63
RER1-204ENST00000378518 CCDC85AQ96PX6 553 aaPredicted RBP25.21■■□□□ 1.63
RER1-204ENST00000378518 CCDC88AQ3V6T2 1871 aa25.2■■□□□ 1.62
RER1-204ENST00000378518 NBPF7P0C2Y1 421 aaPredicted RBP25.2■■□□□ 1.62
RER1-204ENST00000378518 MS4A1P11836 297 aa25.2■■□□□ 1.62
RER1-204ENST00000378518 SBF1O95248 1867 aa25.19■■□□□ 1.62
RER1-204ENST00000378518 RTL9Q8NET4 1388 aa25.19■■□□□ 1.62
RER1-204ENST00000378518 GOLGB1Q14789 3259 aaKnown RBP25.19■■□□□ 1.62
RER1-204ENST00000378518 DZIP1LQ8IYY4 767 aaKnown RBP25.19■■□□□ 1.62
RER1-204ENST00000378518 C7orf43Q8WVR3 580 aa25.19■■□□□ 1.62
RER1-204ENST00000378518 CDC5LQ99459 802 aaKnown RBP25.19■■□□□ 1.62
RER1-204ENST00000378518 USP44Q9H0E7 712 aa25.19■■□□□ 1.62
RER1-204ENST00000378518 HDAC5Q9UQL6 1122 aa25.19■■□□□ 1.62
RER1-204ENST00000378518 LRRC37AA6NMS7 1700 aa25.18■■□□□ 1.62
RER1-204ENST00000378518 GRIPAP1Q4V328 841 aa25.18■■□□□ 1.62
RER1-204ENST00000378518 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.18■■□□□ 1.62
RER1-204ENST00000378518 TNNQ9UQP3 1299 aa25.18■■□□□ 1.62
RER1-204ENST00000378518 CSF1RP07333 972 aa25.17■■□□□ 1.62
RER1-204ENST00000378518 RTKN2Q8IZC4 609 aa25.17■■□□□ 1.62
RER1-204ENST00000378518 CELF1Q92879 486 aaKnown RBP25.17■■□□□ 1.62
RER1-204ENST00000378518 SUCLG2Q96I99 432 aa25.17■■□□□ 1.62
RER1-204ENST00000378518 GREM2Q9H772 168 aa25.17■■□□□ 1.62
RER1-204ENST00000378518 SEC31BQ9NQW1 1179 aa25.17■■□□□ 1.62
RER1-204ENST00000378518 CHMP3Q9Y3E7 222 aa25.17■■□□□ 1.62
RER1-204ENST00000378518 ATP6V0A2Q9Y487 856 aa25.17■■□□□ 1.62
RER1-204ENST00000378518 UBTFL1P0CB47 393 aaPredicted RBP25.16■■□□□ 1.62
RER1-204ENST00000378518 RPS8P62241 208 aaKnown RBP25.16■■□□□ 1.62
RER1-204ENST00000378518 FOXO4P98177 505 aa25.16■■□□□ 1.62
RER1-204ENST00000378518 ANKRD18AQ8IVF6 992 aa25.16■■□□□ 1.62
RER1-204ENST00000378518 TAOK3Q9H2K8 898 aa25.16■■□□□ 1.62
RER1-204ENST00000378518 FAM161AQ3B820 660 aa25.15■■□□□ 1.62
RER1-204ENST00000378518 SP8Q8IXZ3 490 aa25.15■■□□□ 1.62
RER1-204ENST00000378518 TMEM57Q8N5G2 664 aa25.15■■□□□ 1.62
RER1-204ENST00000378518 LTBP3Q9NS15 1303 aa25.14■■□□□ 1.62
RER1-204ENST00000378518 DICER1Q9UPY3 1922 aaKnown RBP25.14■■□□□ 1.62
RER1-204ENST00000378518 COL4A1P02462 1669 aa25.14■■□□□ 1.62
RER1-204ENST00000378518 ANKRD18BA2A2Z9 1011 aa25.14■■□□□ 1.62
RER1-204ENST00000378518 GNAI3P08754 354 aa25.14■■□□□ 1.62
RER1-204ENST00000378518 ITGA6P23229 1130 aa25.14■■□□□ 1.62
RER1-204ENST00000378518 RASSF7Q02833 373 aa25.14■■□□□ 1.62
RER1-204ENST00000378518 LMBR1LQ6UX01 489 aa25.14■■□□□ 1.62
RER1-204ENST00000378518 IGHMBP2P38935 993 aaKnown RBP25.13■■□□□ 1.61
RER1-204ENST00000378518 IFIT5Q13325 482 aaKnown RBP25.13■■□□□ 1.61
RER1-204ENST00000378518 EPHA10Q5JZY3 1008 aa25.13■■□□□ 1.61
RER1-204ENST00000378518 OLFM4Q6UX06 510 aa25.13■■□□□ 1.61
RER1-204ENST00000378518 NFKBIEO00221 500 aa25.12■■□□□ 1.61
RER1-204ENST00000378518 FKBP4Q02790 459 aaKnown RBP eCLIP25.12■■□□□ 1.614e-6■■□□□ 13.6
RER1-204ENST00000378518 CCDC57Q2TAC2 916 aa25.12■■□□□ 1.61
RER1-204ENST00000378518 ITPRIPQ8IWB1 547 aa25.12■■□□□ 1.61
RER1-204ENST00000378518 BICC1Q9H694 974 aaKnown RBP25.12■■□□□ 1.61
RER1-204ENST00000378518 KAZALD1Q96I82 304 aa25.11■■□□□ 1.61
RER1-204ENST00000378518 MEIS3Q99687 375 aa25.11■■□□□ 1.61
RER1-204ENST00000378518 TIAM2Q8IVF5 1701 aa25.1■■□□□ 1.61
RER1-204ENST00000378518 LMNB1P20700 586 aa25.1■■□□□ 1.61
RER1-204ENST00000378518 RABL6Q3YEC7 729 aaPredicted RBP25.1■■□□□ 1.61
RER1-204ENST00000378518 TAF7LQ5H9L4 462 aa25.1■■□□□ 1.61
RER1-204ENST00000378518 PSMD1Q99460 953 aa25.1■■□□□ 1.61
RER1-204ENST00000378518 MPHOSPH8Q99549 860 aa25.1■■□□□ 1.61
RER1-204ENST00000378518 SNED1Q8TER0 1413 aa25.1■■□□□ 1.61
RER1-204ENST00000378518 DPP8Q6V1X1 898 aaPredicted RBP25.09■■□□□ 1.61
RER1-204ENST00000378518 MPNDQ8N594 471 aa25.09■■□□□ 1.61
RER1-204ENST00000378518 SUPT20HQ8NEM7 779 aa25.09■■□□□ 1.61
RER1-204ENST00000378518 PLIN1O60240 522 aa25.08■■□□□ 1.61
RER1-204ENST00000378518 RLBP1P12271 317 aa25.08■■□□□ 1.61
RER1-204ENST00000378518 C9orf131Q5VYM1 1079 aa25.08■■□□□ 1.61
RER1-204ENST00000378518 PANK1Q8TE04 598 aa25.08■■□□□ 1.61
RER1-204ENST00000378518 BSDC1Q9NW68 430 aaPredicted RBP25.08■■□□□ 1.61
RER1-204ENST00000378518 RNF181Q9P0P0 153 aa25.08■■□□□ 1.61
RER1-204ENST00000378518 UTRNP46939 3433 aa25.08■■□□□ 1.6
RER1-204ENST00000378518 YY1P25490 414 aa25.07■■□□□ 1.6
RER1-204ENST00000378518 ANKRD44Q8N8A2 993 aa25.07■■□□□ 1.6
RER1-204ENST00000378518 LRRFIP2Q9Y608 721 aaKnown RBP25.07■■□□□ 1.6
RER1-204ENST00000378518 LTBP1Q14766 1721 aa25.06■■□□□ 1.6
RER1-204ENST00000378518 NSFL1CQ9UNZ2 370 aaKnown RBP25.06■■□□□ 1.6
RER1-204ENST00000378518 GNAI2P04899 355 aa25.05■■□□□ 1.6
RER1-204ENST00000378518 PDE3AQ14432 1141 aa25.05■■□□□ 1.6
RER1-204ENST00000378518 SLC51AQ86UW1 340 aa25.05■■□□□ 1.6
RER1-204ENST00000378518 A0A1B0GUL6 1792 aa25.05■■□□□ 1.6
RER1-204ENST00000378518 ZNF277Q9NRM2 450 aaPredicted RBP25.04■■□□□ 1.6
RER1-204ENST00000378518 ANKIB1Q9P2G1 1089 aa25.04■■□□□ 1.6
RER1-204ENST00000378518 IARSP41252 1262 aaKnown RBP25.03■■□□□ 1.6
RER1-204ENST00000378518 GPSM2P81274 684 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms