RNA–Protein interactions for RNA: ENST00000378308.6

USP9X-202, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP9X, Length 8,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-202ENST00000378308 GTPBP4Q9BZE4 634 aaKnown RBP15.19■□□□□ 0.02
USP9X-202ENST00000378308 HYPKQ9NX55 129 aa15.19■□□□□ 0.02
USP9X-202ENST00000378308 SMC6Q96SB8 1091 aa15.19■□□□□ 0.02
USP9X-202ENST00000378308 KIF5AQ12840 1032 aa15.19■□□□□ 0.02
USP9X-202ENST00000378308 RASA3Q14644 834 aa15.19■□□□□ 0.02
USP9X-202ENST00000378308 RBM26Q5T8P6 1007 aaKnown RBP15.19■□□□□ 0.02
USP9X-202ENST00000378308 PYM1Q9BRP8 204 aaKnown RBP15.19■□□□□ 0.02
USP9X-202ENST00000378308 KMT5BQ4FZB7 885 aa15.18■□□□□ 0.02
USP9X-202ENST00000378308 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.18■□□□□ 0.02
USP9X-202ENST00000378308 CGNQ9P2M7 1197 aaKnown RBP15.18■□□□□ 0.02
USP9X-202ENST00000378308 PPP1R9BQ96SB3 815 aa15.18■□□□□ 0.02
USP9X-202ENST00000378308 NSRP1Q9H0G5 558 aaKnown RBP15.18■□□□□ 0.02
USP9X-202ENST00000378308 SH2B1Q9NRF2 756 aaPredicted RBP15.18■□□□□ 0.02
USP9X-202ENST00000378308 FAM135AQ9P2D6 1515 aa15.18■□□□□ 0.02
USP9X-202ENST00000378308 HECW1Q76N89 1606 aa15.18■□□□□ 0.02
USP9X-202ENST00000378308 FAM13AO94988 1023 aa15.18■□□□□ 0.02
USP9X-202ENST00000378308 POTEB2H3BUK9 544 aa15.18■□□□□ 0.02
USP9X-202ENST00000378308 AFMP43652 599 aa15.18■□□□□ 0.02
USP9X-202ENST00000378308 KANK3Q6NY19 840 aa15.18■□□□□ 0.02
USP9X-202ENST00000378308 ZBTB3Q9H5J0 574 aa15.18■□□□□ 0.02
USP9X-202ENST00000378308 TAF7Q15545 349 aaPredicted RBP15.18■□□□□ 0.02
USP9X-202ENST00000378308 PKNOX2Q96KN3 472 aa15.18■□□□□ 0.02
USP9X-202ENST00000378308 IARSP41252 1262 aaKnown RBP15.17■□□□□ 0.02
USP9X-202ENST00000378308 SP4Q02446 784 aa15.17■□□□□ 0.02
USP9X-202ENST00000378308 LDHCP07864 332 aa15.17■□□□□ 0.02
USP9X-202ENST00000378308 RNF216Q9NWF9 866 aaPredicted RBP15.17■□□□□ 0.02
USP9X-202ENST00000378308 PTGS1P23219 599 aa15.17■□□□□ 0.02
USP9X-202ENST00000378308 SPDYE3A6NKU9 549 aa15.17■□□□□ 0.02
USP9X-202ENST00000378308 ATP2A1O14983 1001 aa15.17■□□□□ 0.02
USP9X-202ENST00000378308 HSPA4P34932 840 aa15.17■□□□□ 0.02
USP9X-202ENST00000378308 NAIPQ13075 1403 aa15.17■□□□□ 0.02
USP9X-202ENST00000378308 FGD6Q6ZV73 1430 aa15.17■□□□□ 0.02
USP9X-202ENST00000378308 CUL4BQ13620 913 aa15.17■□□□□ 0.02
USP9X-202ENST00000378308 LDHAL6AQ6ZMR3 332 aa15.17■□□□□ 0.02
USP9X-202ENST00000378308 CWC25Q9NXE8 425 aaPredicted RBP15.17■□□□□ 0.02
USP9X-202ENST00000378308 MAP3K2Q9Y2U5 619 aa15.17■□□□□ 0.02
USP9X-202ENST00000378308 NSD3Q9BZ95 1437 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 ERICH3Q5RHP9 1530 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 CIZ1Q9ULV3 898 aaPredicted RBP15.16■□□□□ 0.02
USP9X-202ENST00000378308 B4DLN1 442 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 MRPL12P52815 198 aaKnown RBP15.16■□□□□ 0.02
USP9X-202ENST00000378308 SNW1Q13573 536 aaKnown RBP15.16■□□□□ 0.02
USP9X-202ENST00000378308 NFE2L2Q16236 605 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 AMOTQ4VCS5 1084 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 CCDC114Q96M63 670 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 SPAG5Q96R06 1193 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.16■□□□□ 0.02
USP9X-202ENST00000378308 HSP90AA4PQ58FG1 418 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 PPANQ9NQ55 473 aaKnown RBP15.16■□□□□ 0.02
USP9X-202ENST00000378308 EHBP1Q8NDI1 1231 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 FAM169AQ9Y6X4 670 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 SETDB2Q96T68 719 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 PLEKHH1Q9ULM0 1364 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 SMIM23A6NLE4 172 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 GTF2F1P35269 517 aaKnown RBP eCLIP15.16■□□□□ 0.02
USP9X-202ENST00000378308 TMCO4Q5TGY1 634 aa15.16■□□□□ 0.02
USP9X-202ENST00000378308 RPUSD2Q8IZ73 545 aaKnown RBP15.16■□□□□ 0.02
USP9X-202ENST00000378308 LMOD1P29536 600 aaPredicted RBP15.15■□□□□ 0.02
USP9X-202ENST00000378308 TBC1D31Q96DN5 1066 aa15.15■□□□□ 0.02
USP9X-202ENST00000378308 GSDMDP57764 484 aa15.15■□□□□ 0.02
USP9X-202ENST00000378308 MSL1Q68DK7 614 aa15.15■□□□□ 0.02
USP9X-202ENST00000378308 RMND1Q9NWS8 449 aa15.15■□□□□ 0.02
USP9X-202ENST00000378308 SMARCC2Q8TAQ2 1214 aa15.15■□□□□ 0.02
USP9X-202ENST00000378308 USP16Q9Y5T5 823 aa15.15■□□□□ 0.02
USP9X-202ENST00000378308 NUDT16Q96DE0 195 aaKnown RBP15.15■□□□□ 0.02
USP9X-202ENST00000378308 CCDC152Q4G0S7 254 aa15.15■□□□□ 0.02
USP9X-202ENST00000378308 NACA2Q9H009 215 aa15.15■□□□□ 0.02
USP9X-202ENST00000378308 C6orf50Q9HD87 102 aa15.15■□□□□ 0.02
USP9X-202ENST00000378308 N4BP3O15049 544 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 CCDC25Q86WR0 208 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 RNF34Q969K3 372 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 NOD1Q9Y239 953 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 TRIM7Q9C029 511 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 SNRKQ9NRH2 765 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 SELENOSQ9BQE4 189 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 THUMPD2Q9BTF0 503 aaKnown RBP15.14■□□□□ 0.01
USP9X-202ENST00000378308 AGTPBP1Q9UPW5 1226 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 GJB2P29033 226 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 ATP5J2-PTCD1G3V325 749 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 AKR1B10O60218 316 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 WTAPQ15007 396 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 ZGPATQ8N5A5 531 aaKnown RBP15.14■□□□□ 0.01
USP9X-202ENST00000378308 TFIP11Q9UBB9 837 aaKnown RBP15.14■□□□□ 0.01
USP9X-202ENST00000378308 MSANTD4Q8NCY6 345 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 KIFC2Q96AC6 838 aa15.14■□□□□ 0.01
USP9X-202ENST00000378308 PRPHP41219 470 aa15.13■□□□□ 0.01
USP9X-202ENST00000378308 IL27Q8NEV9 243 aa15.13■□□□□ 0.01
USP9X-202ENST00000378308 KIAA1524Q8TCG1 905 aa15.13■□□□□ 0.01
USP9X-202ENST00000378308 F6X3S4 739 aa15.13■□□□□ 0.01
USP9X-202ENST00000378308 ESPNB1AK53 854 aa15.13■□□□□ 0.01
USP9X-202ENST00000378308 ATP2A2P16615 1042 aaKnown RBP15.13■□□□□ 0.01
USP9X-202ENST00000378308 TMPOP42166 694 aaKnown RBP15.13■□□□□ 0.01
USP9X-202ENST00000378308 ACSBG1Q96GR2 724 aa15.13■□□□□ 0.01
USP9X-202ENST00000378308 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.13■□□□□ 0.014e-7■■■□□ 14.6
USP9X-202ENST00000378308 MNAT1P51948 309 aa15.13■□□□□ 0.01
USP9X-202ENST00000378308 C9orf84Q5VXU9 1444 aa15.13■□□□□ 0.01
USP9X-202ENST00000378308 PPP2R5CQ13362 524 aa15.12■□□□□ 0.01
USP9X-202ENST00000378308 UAP1Q16222 522 aaPredicted RBP15.12■□□□□ 0.01
USP9X-202ENST00000378308 NCOA7Q8NI08 942 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms