RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 TTLL11Q8NHH1 800 aa14.76□□□□□ -0.05
DEPDC4-202ENST00000378244 RBM17Q96I25 401 aaKnown RBP14.76□□□□□ -0.05
DEPDC4-202ENST00000378244 SUCLG2Q96I99 432 aa14.76□□□□□ -0.05
DEPDC4-202ENST00000378244 DCAF8L1A6NGE4 600 aa14.76□□□□□ -0.05
DEPDC4-202ENST00000378244 HSP90B1P14625 803 aaKnown RBP14.76□□□□□ -0.05
DEPDC4-202ENST00000378244 STYK1Q6J9G0 422 aa14.76□□□□□ -0.05
DEPDC4-202ENST00000378244 CNKSR1Q969H4 720 aa14.76□□□□□ -0.05
DEPDC4-202ENST00000378244 GREM2Q9H772 168 aa14.76□□□□□ -0.05
DEPDC4-202ENST00000378244 PDZRN3Q9UPQ7 1066 aa14.76□□□□□ -0.05
DEPDC4-202ENST00000378244 UBTFL1P0CB47 393 aaPredicted RBP14.75□□□□□ -0.05
DEPDC4-202ENST00000378244 KCNA4P22459 653 aa14.75□□□□□ -0.05
DEPDC4-202ENST00000378244 ALDH1B1P30837 517 aa14.75□□□□□ -0.05
DEPDC4-202ENST00000378244 SF3B3Q15393 1217 aaKnown RBP14.75□□□□□ -0.05
DEPDC4-202ENST00000378244 CCDC152Q4G0S7 254 aa14.75□□□□□ -0.05
DEPDC4-202ENST00000378244 LMBR1LQ6UX01 489 aa14.75□□□□□ -0.05
DEPDC4-202ENST00000378244 CELF1Q92879 486 aaKnown RBP14.75□□□□□ -0.05
DEPDC4-202ENST00000378244 COG6Q9Y2V7 657 aa14.75□□□□□ -0.05
DEPDC4-202ENST00000378244 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.75□□□□□ -0.05
DEPDC4-202ENST00000378244 KAZALD1Q96I82 304 aa14.75□□□□□ -0.05
DEPDC4-202ENST00000378244 COL11A2P13942 1736 aaPredicted RBP14.75□□□□□ -0.05
DEPDC4-202ENST00000378244 KIAA1551Q9HCM1 1747 aa14.74□□□□□ -0.05
DEPDC4-202ENST00000378244 HOXA10P31260 410 aaPredicted RBP14.74□□□□□ -0.05
DEPDC4-202ENST00000378244 FOXO4P98177 505 aa14.74□□□□□ -0.05
DEPDC4-202ENST00000378244 FAM161AQ3B820 660 aa14.74□□□□□ -0.05
DEPDC4-202ENST00000378244 BICC1Q9H694 974 aaKnown RBP14.74□□□□□ -0.05
DEPDC4-202ENST00000378244 ARHGAP27Q6ZUM4 889 aa14.74□□□□□ -0.05
DEPDC4-202ENST00000378244 RIC1Q4ADV7 1423 aa14.73□□□□□ -0.05
DEPDC4-202ENST00000378244 LRRFIP2Q9Y608 721 aaKnown RBP14.73□□□□□ -0.05
DEPDC4-202ENST00000378244 DDX60Q8IY21 1712 aaKnown RBP14.73□□□□□ -0.05
DEPDC4-202ENST00000378244 CRAMP1Q96RY5 1269 aa14.72□□□□□ -0.05
DEPDC4-202ENST00000378244 SUPT16HQ9Y5B9 1047 aaKnown RBP14.72□□□□□ -0.05
DEPDC4-202ENST00000378244 UTYO14607 1347 aa14.72□□□□□ -0.05
DEPDC4-202ENST00000378244 PPEF1O14829 653 aaPredicted RBP14.72□□□□□ -0.05
DEPDC4-202ENST00000378244 ITGA6P23229 1130 aa14.72□□□□□ -0.05
DEPDC4-202ENST00000378244 RRP1P56182 461 aaKnown RBP14.72□□□□□ -0.05
DEPDC4-202ENST00000378244 PLA2G12BQ9BX93 195 aa14.72□□□□□ -0.05
DEPDC4-202ENST00000378244 C1orf115Q9H7X2 142 aa14.72□□□□□ -0.05
DEPDC4-202ENST00000378244 GRAPQ13588 217 aa14.71□□□□□ -0.05
DEPDC4-202ENST00000378244 GRAPLQ8TC17 118 aaPredicted RBP14.71□□□□□ -0.05
DEPDC4-202ENST00000378244 CSF1RP07333 972 aa14.71□□□□□ -0.05
DEPDC4-202ENST00000378244 MS4A1P11836 297 aa14.71□□□□□ -0.05
DEPDC4-202ENST00000378244 RPS8P62241 208 aaKnown RBP14.71□□□□□ -0.05
DEPDC4-202ENST00000378244 TAF1P21675 1872 aa14.7□□□□□ -0.06
DEPDC4-202ENST00000378244 GNAI3P08754 354 aa14.7□□□□□ -0.06
DEPDC4-202ENST00000378244 ZNF594Q96JF6 807 aaPredicted RBP14.7□□□□□ -0.06
DEPDC4-202ENST00000378244 SLX4Q8IY92 1834 aa14.7□□□□□ -0.06
DEPDC4-202ENST00000378244 GRIN3BO60391 1043 aa14.7□□□□□ -0.06
DEPDC4-202ENST00000378244 IFIT5Q13325 482 aaKnown RBP14.7□□□□□ -0.06
DEPDC4-202ENST00000378244 CCDC57Q2TAC2 916 aa14.7□□□□□ -0.06
DEPDC4-202ENST00000378244 ANKRD44Q8N8A2 993 aa14.7□□□□□ -0.06
DEPDC4-202ENST00000378244 C7orf43Q8WVR3 580 aa14.7□□□□□ -0.06
DEPDC4-202ENST00000378244 COL4A1P02462 1669 aa14.69□□□□□ -0.06
DEPDC4-202ENST00000378244 ZBTB7BO15156 539 aaPredicted RBP14.69□□□□□ -0.06
DEPDC4-202ENST00000378244 BBOX1O75936 387 aa14.69□□□□□ -0.06
DEPDC4-202ENST00000378244 MVPQ14764 893 aaKnown RBP14.69□□□□□ -0.06
DEPDC4-202ENST00000378244 ANKRD18AQ8IVF6 992 aa14.69□□□□□ -0.06
DEPDC4-202ENST00000378244 KLHDC4Q8TBB5 520 aa14.69□□□□□ -0.06
DEPDC4-202ENST00000378244 TMX4Q9H1E5 349 aaPredicted RBP14.69□□□□□ -0.06
DEPDC4-202ENST00000378244 LAMB2P55268 1798 aa14.69□□□□□ -0.06
DEPDC4-202ENST00000378244 ANKRD18BA2A2Z9 1011 aa14.69□□□□□ -0.06
DEPDC4-202ENST00000378244 PDE3AQ14432 1141 aa14.69□□□□□ -0.06
DEPDC4-202ENST00000378244 TAF7LQ5H9L4 462 aa14.69□□□□□ -0.06
DEPDC4-202ENST00000378244 CDC5LQ99459 802 aaKnown RBP14.69□□□□□ -0.06
DEPDC4-202ENST00000378244 CACNA1SQ13698 1873 aa14.68□□□□□ -0.06
DEPDC4-202ENST00000378244 RASSF7Q02833 373 aa14.68□□□□□ -0.06
DEPDC4-202ENST00000378244 NSFL1CQ9UNZ2 370 aaKnown RBP14.68□□□□□ -0.06
DEPDC4-202ENST00000378244 ATP6V0A2Q9Y487 856 aa14.68□□□□□ -0.06
DEPDC4-202ENST00000378244 BRCA1P38398 1863 aaKnown RBP14.68□□□□□ -0.06
DEPDC4-202ENST00000378244 GNAI2P04899 355 aa14.67□□□□□ -0.06
DEPDC4-202ENST00000378244 MPHOSPH8Q99549 860 aa14.67□□□□□ -0.06
DEPDC4-202ENST00000378244 IGHMBP2P38935 993 aaKnown RBP14.67□□□□□ -0.06
DEPDC4-202ENST00000378244 RABL6Q3YEC7 729 aaPredicted RBP14.67□□□□□ -0.06
DEPDC4-202ENST00000378244 CCDC93Q567U6 631 aa14.67□□□□□ -0.06
DEPDC4-202ENST00000378244 DLEC1Q9Y238 1755 aa14.67□□□□□ -0.06
DEPDC4-202ENST00000378244 NFKBIEO00221 500 aa14.66□□□□□ -0.06
DEPDC4-202ENST00000378244 IRX6P78412 446 aaPredicted RBP14.66□□□□□ -0.06
DEPDC4-202ENST00000378244 DDX19BQ9UMR2 479 aa14.66□□□□□ -0.06
DEPDC4-202ENST00000378244 LDHAL6AQ6ZMR3 332 aa14.66□□□□□ -0.06
DEPDC4-202ENST00000378244 SP8Q8IXZ3 490 aa14.66□□□□□ -0.06
DEPDC4-202ENST00000378244 ANKIB1Q9P2G1 1089 aa14.66□□□□□ -0.06
DEPDC4-202ENST00000378244 SRGAP3O43295 1099 aa14.65□□□□□ -0.06
DEPDC4-202ENST00000378244 SIL1Q9H173 461 aa14.65□□□□□ -0.06
DEPDC4-202ENST00000378244 HDAC5Q9UQL6 1122 aa14.65□□□□□ -0.06
DEPDC4-202ENST00000378244 WTIPA6NIX2 430 aaPredicted RBP14.65□□□□□ -0.06
DEPDC4-202ENST00000378244 DPP8Q6V1X1 898 aaPredicted RBP14.65□□□□□ -0.06
DEPDC4-202ENST00000378244 HELBQ8NG08 1087 aaPredicted RBP14.65□□□□□ -0.06
DEPDC4-202ENST00000378244 PUS3Q9BZE2 481 aaKnown RBP14.65□□□□□ -0.06
DEPDC4-202ENST00000378244 TAOK3Q9H2K8 898 aa14.65□□□□□ -0.06
DEPDC4-202ENST00000378244 ZNF277Q9NRM2 450 aaPredicted RBP14.65□□□□□ -0.06
DEPDC4-202ENST00000378244 CNNM1Q9NRU3 951 aa14.65□□□□□ -0.06
DEPDC4-202ENST00000378244 SOGA3Q5TF21 947 aa14.64□□□□□ -0.07
DEPDC4-202ENST00000378244 MPNDQ8N594 471 aa14.64□□□□□ -0.07
DEPDC4-202ENST00000378244 BSDC1Q9NW68 430 aaPredicted RBP14.64□□□□□ -0.07
DEPDC4-202ENST00000378244 PA2G4Q9UQ80 394 aaKnown RBP14.64□□□□□ -0.07
DEPDC4-202ENST00000378244 RTL9Q8NET4 1388 aa14.64□□□□□ -0.07
DEPDC4-202ENST00000378244 PNMA6EA0A0J9YXQ4 647 aa14.64□□□□□ -0.07
DEPDC4-202ENST00000378244 PRELPP51888 382 aa14.64□□□□□ -0.07
DEPDC4-202ENST00000378244 GPSM2P81274 684 aa14.64□□□□□ -0.07
DEPDC4-202ENST00000378244 RTKN2Q8IZC4 609 aa14.64□□□□□ -0.07
DEPDC4-202ENST00000378244 GPR101Q96P66 508 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms