RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ZCRB1Q8TBF4 217 aaKnown RBP16.15■□□□□ 0.18
TRIM13-202ENST00000378182 CLIP2Q9UDT6 1046 aa16.15■□□□□ 0.18
TRIM13-202ENST00000378182 ALS2CR12Q96Q35 445 aa16.15■□□□□ 0.18
TRIM13-202ENST00000378182 FAM135AQ9P2D6 1515 aa16.15■□□□□ 0.18
TRIM13-202ENST00000378182 SHTN1A0MZ66 631 aa16.15■□□□□ 0.18
TRIM13-202ENST00000378182 WTAPQ15007 396 aa16.15■□□□□ 0.18
TRIM13-202ENST00000378182 TMC6Q7Z403 805 aa16.15■□□□□ 0.18
TRIM13-202ENST00000378182 GINS2Q9Y248 185 aa16.15■□□□□ 0.18
TRIM13-202ENST00000378182 CCDC50Q8IVM0 306 aa16.15■□□□□ 0.18
TRIM13-202ENST00000378182 POLR3GO15318 223 aaPredicted RBP16.14■□□□□ 0.17
TRIM13-202ENST00000378182 CSPG5O95196 566 aa16.14■□□□□ 0.17
TRIM13-202ENST00000378182 CCDC117Q8IWD4 279 aaPredicted RBP16.14■□□□□ 0.17
TRIM13-202ENST00000378182 TRIM47Q96LD4 638 aa16.14■□□□□ 0.17
TRIM13-202ENST00000378182 RTCBQ9Y3I0 505 aaKnown RBP16.14■□□□□ 0.17
TRIM13-202ENST00000378182 ZWINTO95229 277 aa16.14■□□□□ 0.17
TRIM13-202ENST00000378182 FBLN1P23142 703 aa16.14■□□□□ 0.17
TRIM13-202ENST00000378182 NAPAP54920 295 aa16.14■□□□□ 0.17
TRIM13-202ENST00000378182 PTPN14Q15678 1187 aa16.14■□□□□ 0.17
TRIM13-202ENST00000378182 DDB1Q16531 1140 aa16.14■□□□□ 0.17
TRIM13-202ENST00000378182 RPAP2Q8IXW5 612 aaPredicted RBP16.14■□□□□ 0.17
TRIM13-202ENST00000378182 TEX13AQ9BXU3 409 aaPredicted RBP16.14■□□□□ 0.17
TRIM13-202ENST00000378182 GDPD2Q9HCC8 539 aa16.14■□□□□ 0.17
TRIM13-202ENST00000378182 GJB2P29033 226 aa16.14■□□□□ 0.17
TRIM13-202ENST00000378182 ZC3H12CQ9C0D7 883 aaKnown RBP16.14■□□□□ 0.17
TRIM13-202ENST00000378182 ZFP91Q96JP5 570 aaPredicted RBP16.14■□□□□ 0.17
TRIM13-202ENST00000378182 NSFL1CQ9UNZ2 370 aaKnown RBP16.14■□□□□ 0.17
TRIM13-202ENST00000378182 FAM83GA6ND36 823 aa16.14■□□□□ 0.17
TRIM13-202ENST00000378182 ZYXQ15942 572 aaKnown RBP16.14■□□□□ 0.17
TRIM13-202ENST00000378182 KRT13P13646 458 aa16.13■□□□□ 0.17
TRIM13-202ENST00000378182 CD109Q6YHK3 1445 aa16.13■□□□□ 0.17
TRIM13-202ENST00000378182 MAP9Q49MG5 647 aa16.13■□□□□ 0.17
TRIM13-202ENST00000378182 NAA16Q6N069 864 aaPredicted RBP16.13■□□□□ 0.17
TRIM13-202ENST00000378182 PLEKHH2Q8IVE3 1493 aa16.13■□□□□ 0.17
TRIM13-202ENST00000378182 ERMNQ8TAM6 284 aa16.13■□□□□ 0.17
TRIM13-202ENST00000378182 BACH1O14867 736 aa16.13■□□□□ 0.17
TRIM13-202ENST00000378182 ZSCAN12O43309 604 aa16.13■□□□□ 0.17
TRIM13-202ENST00000378182 FAM13AO94988 1023 aa16.13■□□□□ 0.17
TRIM13-202ENST00000378182 ATXN8OSP0DMR3 200 aa16.13■□□□□ 0.17
TRIM13-202ENST00000378182 NCOA7Q8NI08 942 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 SPDYE3A6NKU9 549 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 MXRA7P84157 204 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 MIGA1Q8NAN2 632 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 HAUS7Q99871 368 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 PICK1Q9NRD5 415 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 FANCIQ9NVI1 1328 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 EVI5LQ96CN4 794 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 ZSWIM4Q9H7M6 989 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 KIAA1107Q9UPP5 1409 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 MAGEB6P1A0A0J9YX57 407 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 FAM114A1Q8IWE2 563 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 ZGPATQ8N5A5 531 aaKnown RBP16.12■□□□□ 0.17
TRIM13-202ENST00000378182 FAM107BQ9H098 131 aa16.12■□□□□ 0.17
TRIM13-202ENST00000378182 ATP2C2O75185 946 aa16.11■□□□□ 0.17
TRIM13-202ENST00000378182 IMPG2Q9BZV3 1241 aa16.11■□□□□ 0.17
TRIM13-202ENST00000378182 PI4KAP2A4QPH2 592 aa16.11■□□□□ 0.17
TRIM13-202ENST00000378182 PI4KAP1Q8N8J0 262 aa16.11■□□□□ 0.17
TRIM13-202ENST00000378182 HELBQ8NG08 1087 aaPredicted RBP16.11■□□□□ 0.17
TRIM13-202ENST00000378182 RNF34Q969K3 372 aa16.11■□□□□ 0.17
TRIM13-202ENST00000378182 PLIN2Q99541 437 aa16.11■□□□□ 0.17
TRIM13-202ENST00000378182 GPHNQ9NQX3 736 aaPredicted RBP16.11■□□□□ 0.17
TRIM13-202ENST00000378182 ORC3Q9UBD5 711 aaPredicted RBP16.11■□□□□ 0.17
TRIM13-202ENST00000378182 SNRPA1P09661 255 aaKnown RBP16.11■□□□□ 0.17
TRIM13-202ENST00000378182 PTGS1P23219 599 aa16.1■□□□□ 0.17
TRIM13-202ENST00000378182 SREK1Q8WXA9 508 aaKnown RBP16.1■□□□□ 0.17
TRIM13-202ENST00000378182 CFAP65Q6ZU64 1925 aaKnown RBP16.1■□□□□ 0.17
TRIM13-202ENST00000378182 CHPF2Q9P2E5 772 aa16.1■□□□□ 0.17
TRIM13-202ENST00000378182 MTERF4Q7Z6M4 381 aaKnown RBP16.1■□□□□ 0.17
TRIM13-202ENST00000378182 ARHGEF11O15085 1522 aa16.1■□□□□ 0.17
TRIM13-202ENST00000378182 WASLO00401 505 aaPredicted RBP16.1■□□□□ 0.17
TRIM13-202ENST00000378182 CCDC183Q5T5S1 534 aa16.1■□□□□ 0.17
TRIM13-202ENST00000378182 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
TRIM13-202ENST00000378182 RASA3Q14644 834 aa16.1■□□□□ 0.17
TRIM13-202ENST00000378182 DZIP3Q86Y13 1208 aaKnown RBP16.1■□□□□ 0.17
TRIM13-202ENST00000378182 NYXQ9GZU5 481 aa16.1■□□□□ 0.17
TRIM13-202ENST00000378182 RRAGBQ5VZM2 374 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 UIMC1Q96RL1 719 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 FLIIQ13045 1269 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 KIAA0753Q2KHM9 967 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 MAGEB6Q8N7X4 407 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 TIGD1Q96MW7 591 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 GABPAQ06546 454 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 C6orf50Q9HD87 102 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 CCDC175P0C221 793 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 KMT5BQ4FZB7 885 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 SKAP1Q86WV1 359 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 CASKIN1Q8WXD9 1431 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 CHST3Q7LGC8 479 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 SSH1Q8WYL5 1049 aa16.09■□□□□ 0.17
TRIM13-202ENST00000378182 EIF6P56537 245 aaKnown RBP16.08■□□□□ 0.17
TRIM13-202ENST00000378182 CTR9Q6PD62 1173 aa16.08■□□□□ 0.17
TRIM13-202ENST00000378182 TMOD4Q9NZQ9 345 aa16.08■□□□□ 0.17
TRIM13-202ENST00000378182 ANKRD13DQ6ZTN6 518 aa16.08■□□□□ 0.16
TRIM13-202ENST00000378182 FNBP4Q8N3X1 1017 aaPredicted RBP16.08■□□□□ 0.16
TRIM13-202ENST00000378182 HFM1A2PYH4 1435 aa16.08■□□□□ 0.16
TRIM13-202ENST00000378182 SNX16P57768 344 aa16.08■□□□□ 0.16
TRIM13-202ENST00000378182 PLCB3Q01970 1234 aa16.08■□□□□ 0.16
TRIM13-202ENST00000378182 NEK1Q96PY6 1258 aa16.08■□□□□ 0.16
TRIM13-202ENST00000378182 LMTK3Q96Q04 1460 aa16.08■□□□□ 0.16
TRIM13-202ENST00000378182 CCDC65Q8IXS2 484 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms