RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 BABAM1Q9NWV8 329 aa15.39■□□□□ 0.05
NPHP4-203ENST00000378169 NBPF5PQ86XG9 351 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-203ENST00000378169 RTL1A6NKG5 1358 aa15.38■□□□□ 0.05
NPHP4-203ENST00000378169 GIGYF1O75420 1035 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-203ENST00000378169 METAP2P50579 478 aaKnown RBP eCLIP15.38■□□□□ 0.05
NPHP4-203ENST00000378169 KRT18P05783 430 aaKnown RBP15.38■□□□□ 0.05
NPHP4-203ENST00000378169 CCDC152Q4G0S7 254 aa15.38■□□□□ 0.05
NPHP4-203ENST00000378169 MFSD6Q6ZSS7 791 aa15.38■□□□□ 0.05
NPHP4-203ENST00000378169 EDC3Q96F86 508 aaKnown RBP15.38■□□□□ 0.05
NPHP4-203ENST00000378169 KIAA0232Q92628 1395 aa15.38■□□□□ 0.05
NPHP4-203ENST00000378169 DHX8Q14562 1220 aaKnown RBP15.38■□□□□ 0.05
NPHP4-203ENST00000378169 RNF41Q9H4P4 317 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-203ENST00000378169 SYNMO15061 1565 aa15.37■□□□□ 0.05
NPHP4-203ENST00000378169 CCDC171Q6TFL3 1326 aa15.37■□□□□ 0.05
NPHP4-203ENST00000378169 EPS15P42566 896 aa15.37■□□□□ 0.05
NPHP4-203ENST00000378169 ZNF165P49910 485 aa15.37■□□□□ 0.05
NPHP4-203ENST00000378169 SLC26A6Q9BXS9 759 aa15.37■□□□□ 0.05
NPHP4-203ENST00000378169 ARHGEF10O15013 1369 aa15.37■□□□□ 0.05
NPHP4-203ENST00000378169 PCDH11XQ9BZA7 1347 aa15.37■□□□□ 0.05
NPHP4-203ENST00000378169 PCDH11YQ9BZA8 1340 aa15.37■□□□□ 0.05
NPHP4-203ENST00000378169 EFCAB6Q5THR3 1501 aa15.37■□□□□ 0.05
NPHP4-203ENST00000378169 UBAP1LF5GYI3 381 aa15.37■□□□□ 0.05
NPHP4-203ENST00000378169 PRIM1P49642 420 aaKnown RBP15.37■□□□□ 0.05
NPHP4-203ENST00000378169 GCKRQ14397 625 aa15.37■□□□□ 0.05
NPHP4-203ENST00000378169 F13A1P00488 732 aa15.36■□□□□ 0.05
NPHP4-203ENST00000378169 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-203ENST00000378169 RPGRQ92834 1020 aaKnown RBP15.36■□□□□ 0.05
NPHP4-203ENST00000378169 ANO10Q9NW15 660 aa15.36■□□□□ 0.05
NPHP4-203ENST00000378169 MAGEC2Q9UBF1 373 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-203ENST00000378169 A0A1B0GUL7 405 aa15.36■□□□□ 0.05
NPHP4-203ENST00000378169 UQCRFS1P1P0C7P4 283 aa15.36■□□□□ 0.05
NPHP4-203ENST00000378169 DDX19AQ9NUU7 478 aaKnown RBP15.36■□□□□ 0.05
NPHP4-203ENST00000378169 MPHOSPH10O00566 681 aaKnown RBP15.36■□□□□ 0.05
NPHP4-203ENST00000378169 SYT1P21579 422 aa15.36■□□□□ 0.05
NPHP4-203ENST00000378169 CYP7A1P22680 504 aa15.36■□□□□ 0.05
NPHP4-203ENST00000378169 SSRP1Q08945 709 aaKnown RBP15.36■□□□□ 0.05
NPHP4-203ENST00000378169 CCAR1Q8IX12 1150 aaKnown RBP15.36■□□□□ 0.05
NPHP4-203ENST00000378169 DNAJC10Q8IXB1 793 aa15.36■□□□□ 0.05
NPHP4-203ENST00000378169 ZNF444Q8N0Y2 327 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-203ENST00000378169 PLBD2Q8NHP8 589 aa15.36■□□□□ 0.05
NPHP4-203ENST00000378169 SGSM2O43147 1006 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 APOBRQ0VD83 1088 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 ADCY5O95622 1261 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 RFC4P35249 363 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 PPFIBP1Q86W92 1011 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 ANKRD18AQ8IVF6 992 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 AK7Q96M32 723 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 DACT1Q9NYF0 836 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 CCDC70Q6NSX1 233 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 FAM173BQ6P4H8 233 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 TSPY2A6NKD2 308 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 TNNI3KQ59H18 835 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 MIGA1Q8NAN2 632 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 FPGT-TNNI3KV9GXZ4 949 aa15.35■□□□□ 0.05
NPHP4-203ENST00000378169 TSPOAP1O95153 1857 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 AATKQ6ZMQ8 1374 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 CCDC112Q8NEF3 446 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 DACH1Q9UI36 760 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 FAM135BQ49AJ0 1406 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 ABCC3O15438 1527 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 UQCRHLA0A096LP55 91 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 EYA2O00167 538 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 UQCRHP07919 91 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 RXRAP19793 462 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 PROSER3Q2NL68 480 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 LRSAM1Q6UWE0 723 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 SLAIN2Q9P270 581 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 CDC42BPBQ9Y5S2 1711 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 ADCY10Q96PN6 1610 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 CATIPQ7Z7H3 387 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 STX8Q9UNK0 236 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 JAG2Q9Y219 1238 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 SLC4A4Q9Y6R1 1079 aa15.34■□□□□ 0.05
NPHP4-203ENST00000378169 PRC1O43663 620 aa15.33■□□□□ 0.05
NPHP4-203ENST00000378169 CNNM3Q8NE01 707 aa15.33■□□□□ 0.05
NPHP4-203ENST00000378169 RNF113AO15541 343 aaKnown RBP15.33■□□□□ 0.04
NPHP4-203ENST00000378169 ZBTB43O43298 467 aa15.33■□□□□ 0.04
NPHP4-203ENST00000378169 RUFY3Q7L099 469 aa15.33■□□□□ 0.04
NPHP4-203ENST00000378169 NLRP3Q96P20 1036 aa15.33■□□□□ 0.04
NPHP4-203ENST00000378169 SETDB2Q96T68 719 aa15.33■□□□□ 0.04
NPHP4-203ENST00000378169 SMARCE1Q969G3 411 aa15.33■□□□□ 0.04
NPHP4-203ENST00000378169 SNX14Q9Y5W7 946 aa15.33■□□□□ 0.04
NPHP4-203ENST00000378169 PRAMEF22A3QJZ6 481 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 NLRP5P59047 1200 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 STIM1Q13586 685 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 ZNF830Q96NB3 372 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-203ENST00000378169 UTP14AQ9BVJ6 771 aaKnown RBP15.32■□□□□ 0.04
NPHP4-203ENST00000378169 HECW2Q9P2P5 1572 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 CLTCL1P53675 1640 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 SMTNL1A8MU46 457 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 ZNF771Q7L3S4 317 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-203ENST00000378169 SSH3Q8TE77 659 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 VAT1LQ9HCJ6 419 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 CLIP2Q9UDT6 1046 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 CEP131Q9UPN4 1083 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 IGSF1Q8N6C5 1336 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 GPS2Q13227 327 aa15.32■□□□□ 0.04
NPHP4-203ENST00000378169 INTS4Q96HW7 963 aaKnown RBP15.32■□□□□ 0.04
NPHP4-203ENST00000378169 ARGLU1Q9NWB6 273 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-203ENST00000378169 USP6P35125 1406 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms