RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 PUS3Q9BZE2 481 aaKnown RBP23.1■■□□□ 1.29
PCDHA4-201ENST00000378125 ZSWIM6Q9HCJ5 1215 aa23.1■■□□□ 1.29
PCDHA4-201ENST00000378125 PAPPAQ13219 1627 aa23.1■■□□□ 1.29
PCDHA4-201ENST00000378125 NUP188Q5SRE5 1749 aa23.1■■□□□ 1.29
PCDHA4-201ENST00000378125 TNS2Q63HR2 1409 aa23.1■■□□□ 1.29
PCDHA4-201ENST00000378125 TPRNQ4KMQ1 711 aa23.09■■□□□ 1.29
PCDHA4-201ENST00000378125 ATG3Q9NT62 314 aa23.09■■□□□ 1.29
PCDHA4-201ENST00000378125 NHSL1Q5SYE7 1610 aa23.08■■□□□ 1.29
PCDHA4-201ENST00000378125 FAM89AQ96GI7 184 aa23.08■■□□□ 1.29
PCDHA4-201ENST00000378125 ZSCAN23Q3MJ62 389 aa23.08■■□□□ 1.28
PCDHA4-201ENST00000378125 VPS53Q5VIR6 699 aa23.08■■□□□ 1.28
PCDHA4-201ENST00000378125 NECAB1Q8N987 351 aa23.08■■□□□ 1.28
PCDHA4-201ENST00000378125 KCNB2Q92953 911 aa23.08■■□□□ 1.28
PCDHA4-201ENST00000378125 RPAP1Q9BWH6 1393 aaPredicted RBP23.08■■□□□ 1.28
PCDHA4-201ENST00000378125 TJP1Q07157 1748 aa23.07■■□□□ 1.28
PCDHA4-201ENST00000378125 MED23Q9ULK4 1368 aa23.07■■□□□ 1.28
PCDHA4-201ENST00000378125 SYNE4Q8N205 404 aa23.07■■□□□ 1.28
PCDHA4-201ENST00000378125 SMC3Q9UQE7 1217 aa23.07■■□□□ 1.28
PCDHA4-201ENST00000378125 A0A0G2JS52 829 aa23.06■■□□□ 1.28
PCDHA4-201ENST00000378125 TCIRG1Q13488 830 aa23.06■■□□□ 1.28
PCDHA4-201ENST00000378125 GOLIM4O00461 696 aa23.05■■□□□ 1.28
PCDHA4-201ENST00000378125 TAF5LO75529 589 aa23.05■■□□□ 1.28
PCDHA4-201ENST00000378125 HAUS7Q99871 368 aa23.05■■□□□ 1.28
PCDHA4-201ENST00000378125 WDR33Q9C0J8 1336 aaKnown RBP23.05■■□□□ 1.28
PCDHA4-201ENST00000378125 GPTP24298 496 aa23.05■■□□□ 1.28
PCDHA4-201ENST00000378125 ME3Q16798 604 aa23.05■■□□□ 1.28
PCDHA4-201ENST00000378125 KIF6Q6ZMV9 814 aa23.05■■□□□ 1.28
PCDHA4-201ENST00000378125 ISCA1Q9BUE6 129 aa23.05■■□□□ 1.28
PCDHA4-201ENST00000378125 TM6SF1Q9BZW5 370 aa23.05■■□□□ 1.28
PCDHA4-201ENST00000378125 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.05■■□□□ 1.28
PCDHA4-201ENST00000378125 EYA2O00167 538 aa23.04■■□□□ 1.28
PCDHA4-201ENST00000378125 SNRKQ9NRH2 765 aa23.04■■□□□ 1.28
PCDHA4-201ENST00000378125 TPCN1Q9ULQ1 816 aa23.04■■□□□ 1.28
PCDHA4-201ENST00000378125 SYT1P21579 422 aa23.04■■□□□ 1.28
PCDHA4-201ENST00000378125 ZNF609O15014 1411 aa23.04■■□□□ 1.28
PCDHA4-201ENST00000378125 GJB2P29033 226 aa23.03■■□□□ 1.28
PCDHA4-201ENST00000378125 IL15P40933 162 aaPredicted RBP23.03■■□□□ 1.28
PCDHA4-201ENST00000378125 HLFQ16534 295 aa23.03■■□□□ 1.28
PCDHA4-201ENST00000378125 TMEM63CQ9P1W3 806 aa23.03■■□□□ 1.28
PCDHA4-201ENST00000378125 ISY1Q9ULR0 285 aaKnown RBP23.03■■□□□ 1.28
PCDHA4-201ENST00000378125 STARD3NLO95772 234 aa23.03■■□□□ 1.28
PCDHA4-201ENST00000378125 ST3GAL1Q11201 340 aa23.03■■□□□ 1.28
PCDHA4-201ENST00000378125 RNF20Q5VTR2 975 aa23.03■■□□□ 1.28
PCDHA4-201ENST00000378125 SLC4A9Q96Q91 983 aa23.03■■□□□ 1.28
PCDHA4-201ENST00000378125 A0A1B0GUL7 405 aa23.02■■□□□ 1.28
PCDHA4-201ENST00000378125 CCDC57Q2TAC2 916 aa23.02■■□□□ 1.28
PCDHA4-201ENST00000378125 BLOC1S2Q6QNY1 142 aa23.02■■□□□ 1.28
PCDHA4-201ENST00000378125 STX6O43752 255 aa23.02■■□□□ 1.28
PCDHA4-201ENST00000378125 GADD45BO75293 160 aaPredicted RBP23.02■■□□□ 1.28
PCDHA4-201ENST00000378125 PSMA5P28066 241 aa23.01■■□□□ 1.27
PCDHA4-201ENST00000378125 PAG1Q9NWQ8 432 aa23.01■■□□□ 1.27
PCDHA4-201ENST00000378125 EXOC5O00471 708 aa23■■□□□ 1.27
PCDHA4-201ENST00000378125 ADAMTS2O95450 1211 aa23■■□□□ 1.27
PCDHA4-201ENST00000378125 STK3Q13188 491 aa23■■□□□ 1.27
PCDHA4-201ENST00000378125 USP48Q86UV5 1035 aa23■■□□□ 1.27
PCDHA4-201ENST00000378125 ZSCAN22P10073 491 aaPredicted RBP22.99■■□□□ 1.27
PCDHA4-201ENST00000378125 MCMDC2Q4G0Z9 681 aa22.99■■□□□ 1.27
PCDHA4-201ENST00000378125 KBTBD3Q8NAB2 608 aa22.99■■□□□ 1.27
PCDHA4-201ENST00000378125 TEX13AQ9BXU3 409 aaPredicted RBP22.99■■□□□ 1.27
PCDHA4-201ENST00000378125 CNPY2Q9Y2B0 182 aa22.99■■□□□ 1.27
PCDHA4-201ENST00000378125 SYCE3A1L190 88 aa22.99■■□□□ 1.27
PCDHA4-201ENST00000378125 ZSCAN31Q96LW9 406 aaPredicted RBP22.99■■□□□ 1.27
PCDHA4-201ENST00000378125 IFIT1P09914 478 aaKnown RBP22.98■■□□□ 1.27
PCDHA4-201ENST00000378125 RPS6KB1P23443 525 aa22.98■■□□□ 1.27
PCDHA4-201ENST00000378125 PRIM1P49642 420 aaKnown RBP22.98■■□□□ 1.27
PCDHA4-201ENST00000378125 ZNF445P59923 1031 aa22.98■■□□□ 1.27
PCDHA4-201ENST00000378125 TAF7LQ5H9L4 462 aa22.98■■□□□ 1.27
PCDHA4-201ENST00000378125 VSIG10Q8N0Z9 540 aa22.98■■□□□ 1.27
PCDHA4-201ENST00000378125 CEP126Q9P2H0 1117 aa22.98■■□□□ 1.27
PCDHA4-201ENST00000378125 ZBTB1Q9Y2K1 713 aa22.98■■□□□ 1.27
PCDHA4-201ENST00000378125 ITGB4P16144 1822 aa22.98■■□□□ 1.27
PCDHA4-201ENST00000378125 ADORA1P30542 326 aa22.98■■□□□ 1.27
PCDHA4-201ENST00000378125 NASPP49321 788 aaPredicted RBP22.98■■□□□ 1.27
PCDHA4-201ENST00000378125 FKBP4Q02790 459 aaKnown RBP eCLIP22.97■■□□□ 1.27
PCDHA4-201ENST00000378125 RRAGDQ9NQL2 400 aaPredicted RBP22.97■■□□□ 1.27
PCDHA4-201ENST00000378125 SH2B1Q9NRF2 756 aaPredicted RBP22.97■■□□□ 1.27
PCDHA4-201ENST00000378125 FAM43AQ8N2R8 423 aa22.97■■□□□ 1.27
PCDHA4-201ENST00000378125 TBC1D2BQ9UPU7 963 aa22.97■■□□□ 1.27
PCDHA4-201ENST00000378125 MAP3K15Q6ZN16 1313 aa22.97■■□□□ 1.27
PCDHA4-201ENST00000378125 VPS37CA5D8V6 355 aaPredicted RBP22.96■■□□□ 1.27
PCDHA4-201ENST00000378125 CYP19A1P11511 503 aaPredicted RBP22.96■■□□□ 1.27
PCDHA4-201ENST00000378125 TOB2Q14106 344 aaPredicted RBP22.96■■□□□ 1.27
PCDHA4-201ENST00000378125 TCHHQ07283 1943 aa22.96■■□□□ 1.27
PCDHA4-201ENST00000378125 JCADQ9P266 1359 aa22.96■■□□□ 1.27
PCDHA4-201ENST00000378125 F13A1P00488 732 aa22.96■■□□□ 1.27
PCDHA4-201ENST00000378125 PCCAP05165 728 aaPredicted RBP22.96■■□□□ 1.27
PCDHA4-201ENST00000378125 CYP21A2P08686 494 aa22.96■■□□□ 1.27
PCDHA4-201ENST00000378125 GORABQ5T7V8 394 aa22.96■■□□□ 1.27
PCDHA4-201ENST00000378125 GIGYF2Q6Y7W6 1299 aaKnown RBP22.96■■□□□ 1.27
PCDHA4-201ENST00000378125 ZBTB38Q8NAP3 1195 aaPredicted RBP22.96■■□□□ 1.27
PCDHA4-201ENST00000378125 RBSNQ9H1K0 784 aa22.96■■□□□ 1.27
PCDHA4-201ENST00000378125 GPR108Q9NPR9 543 aa22.96■■□□□ 1.27
PCDHA4-201ENST00000378125 CIAO1O76071 339 aa22.95■■□□□ 1.26
PCDHA4-201ENST00000378125 USPL1Q5W0Q7 1092 aa22.95■■□□□ 1.26
PCDHA4-201ENST00000378125 LRRC2Q9BYS8 371 aa22.95■■□□□ 1.26
PCDHA4-201ENST00000378125 HMG20BQ9P0W2 317 aa22.95■■□□□ 1.26
PCDHA4-201ENST00000378125 DISP2A7MBM2 1401 aa22.95■■□□□ 1.26
PCDHA4-201ENST00000378125 BCL9O00512 1426 aa22.95■■□□□ 1.26
PCDHA4-201ENST00000378125 ROBO1Q9Y6N7 1651 aa22.95■■□□□ 1.26
PCDHA4-201ENST00000378125 A0A0G2JLW4 131 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms