RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 KIAA0753Q2KHM9 967 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 FAM13AO94988 1023 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 KRT9P35527 623 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 SPOUT1Q5T280 376 aaKnown RBP18.66■□□□□ 0.58
RGP1-201ENST00000378078 PPP1R42Q7Z4L9 355 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 OGFOD1Q8N543 542 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 CAPZA3Q96KX2 299 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 TTC21AQ8NDW8 1320 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 STXBP4Q6ZWJ1 553 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 SPATA24Q86W54 205 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 MAEAQ7L5Y9 396 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 TCEANC2Q96MN5 208 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 CRNKL1Q9BZJ0 848 aaKnown RBP18.66■□□□□ 0.58
RGP1-201ENST00000378078 IQCGQ9H095 443 aaKnown RBP18.66■□□□□ 0.58
RGP1-201ENST00000378078 TFCP2L1Q9NZI6 479 aa18.66■□□□□ 0.58
RGP1-201ENST00000378078 UBAP1LF5GYI3 381 aa18.65■□□□□ 0.58
RGP1-201ENST00000378078 UAP1Q16222 522 aaPredicted RBP18.65■□□□□ 0.58
RGP1-201ENST00000378078 CUX1P39880 1505 aa18.65■□□□□ 0.58
RGP1-201ENST00000378078 MIGA1Q8NAN2 632 aa18.65■□□□□ 0.58
RGP1-201ENST00000378078 MARCKSP29966 332 aaPredicted RBP18.65■□□□□ 0.58
RGP1-201ENST00000378078 GABPAQ06546 454 aa18.65■□□□□ 0.58
RGP1-201ENST00000378078 BIRC2Q13490 618 aa18.65■□□□□ 0.58
RGP1-201ENST00000378078 DNAAF4Q8WXU2 420 aa18.65■□□□□ 0.58
RGP1-201ENST00000378078 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
RGP1-201ENST00000378078 CCDC25Q86WR0 208 aa18.64■□□□□ 0.58
RGP1-201ENST00000378078 NOP9Q86U38 636 aaKnown RBP18.64■□□□□ 0.58
RGP1-201ENST00000378078 WDR63Q8IWG1 891 aa18.64■□□□□ 0.58
RGP1-201ENST00000378078 RNF34Q969K3 372 aa18.64■□□□□ 0.58
RGP1-201ENST00000378078 KIF18AQ8NI77 898 aa18.64■□□□□ 0.57
RGP1-201ENST00000378078 PRG4Q92954 1404 aaPredicted RBP18.64■□□□□ 0.57
RGP1-201ENST00000378078 PDE3AQ14432 1141 aa18.64■□□□□ 0.57
RGP1-201ENST00000378078 GPIHBP1Q8IV16 184 aa18.64■□□□□ 0.57
RGP1-201ENST00000378078 RXRAP19793 462 aa18.64■□□□□ 0.57
RGP1-201ENST00000378078 SLC39A6Q13433 755 aa18.64■□□□□ 0.57
RGP1-201ENST00000378078 FGD6Q6ZV73 1430 aa18.64■□□□□ 0.57
RGP1-201ENST00000378078 KRT5P13647 590 aa18.64■□□□□ 0.57
RGP1-201ENST00000378078 NAPAP54920 295 aa18.64■□□□□ 0.57
RGP1-201ENST00000378078 PPP1R21Q6ZMI0 780 aa18.64■□□□□ 0.57
RGP1-201ENST00000378078 PFDN4Q9NQP4 134 aa18.64■□□□□ 0.57
RGP1-201ENST00000378078 RAB3GAP1Q15042 981 aa18.63■□□□□ 0.57
RGP1-201ENST00000378078 CCDC12Q8WUD4 166 aaPredicted RBP18.63■□□□□ 0.57
RGP1-201ENST00000378078 EIF6P56537 245 aaKnown RBP18.63■□□□□ 0.57
RGP1-201ENST00000378078 CCDC114Q96M63 670 aa18.63■□□□□ 0.57
RGP1-201ENST00000378078 GEN1Q17RS7 908 aa18.63■□□□□ 0.57
RGP1-201ENST00000378078 FBF1Q8TES7 1133 aa18.63■□□□□ 0.57
RGP1-201ENST00000378078 NCBP1Q09161 790 aaKnown RBP18.63■□□□□ 0.57
RGP1-201ENST00000378078 CCDC184Q52MB2 194 aa18.63■□□□□ 0.57
RGP1-201ENST00000378078 HSF2BPO75031 334 aa18.63■□□□□ 0.57
RGP1-201ENST00000378078 HELBQ8NG08 1087 aaPredicted RBP18.63■□□□□ 0.57
RGP1-201ENST00000378078 ORC3Q9UBD5 711 aaPredicted RBP18.63■□□□□ 0.57
RGP1-201ENST00000378078 CHMP2AO43633 222 aa18.63■□□□□ 0.57
RGP1-201ENST00000378078 AAMPQ13685 434 aa18.63■□□□□ 0.57
RGP1-201ENST00000378078 CCDC6Q16204 474 aa18.62■□□□□ 0.57
RGP1-201ENST00000378078 LRRC45Q96CN5 670 aa18.62■□□□□ 0.57
RGP1-201ENST00000378078 WTAPQ15007 396 aa18.62■□□□□ 0.57
RGP1-201ENST00000378078 CABLES1Q8TDN4 633 aa18.62■□□□□ 0.57
RGP1-201ENST00000378078 GBP3Q9H0R5 595 aa18.62■□□□□ 0.57
RGP1-201ENST00000378078 MAP7D1Q3KQU3 841 aa18.61■□□□□ 0.57
RGP1-201ENST00000378078 DDX39AO00148 427 aaKnown RBP18.61■□□□□ 0.57
RGP1-201ENST00000378078 CCDC152Q4G0S7 254 aa18.61■□□□□ 0.57
RGP1-201ENST00000378078 ZKSCAN3Q9BRR0 538 aa18.61■□□□□ 0.57
RGP1-201ENST00000378078 NAA15Q9BXJ9 866 aaKnown RBP18.61■□□□□ 0.57
RGP1-201ENST00000378078 FAM160A1Q05DH4 1040 aa18.61■□□□□ 0.57
RGP1-201ENST00000378078 C20orf194Q5TEA3 1177 aa18.61■□□□□ 0.57
RGP1-201ENST00000378078 NOD1Q9Y239 953 aa18.61■□□□□ 0.57
RGP1-201ENST00000378078 CRCPO75575 148 aa18.61■□□□□ 0.57
RGP1-201ENST00000378078 SMARCC1Q92922 1105 aaPredicted RBP18.61■□□□□ 0.57
RGP1-201ENST00000378078 AMOTL2Q9Y2J4 779 aa18.61■□□□□ 0.57
RGP1-201ENST00000378078 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.61■□□□□ 0.57
RGP1-201ENST00000378078 SMC1BQ8NDV3 1235 aa18.61■□□□□ 0.57
RGP1-201ENST00000378078 PPANQ9NQ55 473 aaKnown RBP18.61■□□□□ 0.57
RGP1-201ENST00000378078 HYPKQ9NX55 129 aa18.61■□□□□ 0.57
RGP1-201ENST00000378078 KIF21BO75037 1637 aa18.61■□□□□ 0.57
RGP1-201ENST00000378078 LMOD1P29536 600 aaPredicted RBP18.61■□□□□ 0.57
RGP1-201ENST00000378078 MCM7P33993 719 aa18.61■□□□□ 0.57
RGP1-201ENST00000378078 DNAJC21Q5F1R6 531 aaKnown RBP18.61■□□□□ 0.57
RGP1-201ENST00000378078 SREK1Q8WXA9 508 aaKnown RBP18.61■□□□□ 0.57
RGP1-201ENST00000378078 NIP7Q9Y221 180 aaKnown RBP eCLIP18.61■□□□□ 0.57
RGP1-201ENST00000378078 MCM4P33991 863 aa18.6■□□□□ 0.57
RGP1-201ENST00000378078 TTC36A6NLP5 189 aa18.6■□□□□ 0.57
RGP1-201ENST00000378078 BACH1O14867 736 aa18.6■□□□□ 0.57
RGP1-201ENST00000378078 MAK16Q9BXY0 300 aaKnown RBP18.6■□□□□ 0.57
RGP1-201ENST00000378078 SNX16P57768 344 aa18.6■□□□□ 0.57
RGP1-201ENST00000378078 PARP3Q9Y6F1 533 aa18.6■□□□□ 0.57
RGP1-201ENST00000378078 N4BP3O15049 544 aa18.6■□□□□ 0.57
RGP1-201ENST00000378078 CEP112Q8N8E3 955 aa18.6■□□□□ 0.57
RGP1-201ENST00000378078 C6orf163Q5TEZ5 329 aa18.6■□□□□ 0.57
RGP1-201ENST00000378078 ANKRD24Q8TF21 1146 aa18.59■□□□□ 0.57
RGP1-201ENST00000378078 ANO3Q9BYT9 981 aa18.59■□□□□ 0.57
RGP1-201ENST00000378078 GSTO1P78417 241 aa18.59■□□□□ 0.57
RGP1-201ENST00000378078 DCAF17Q5H9S7 520 aaPredicted RBP18.59■□□□□ 0.57
RGP1-201ENST00000378078 GIMAP6Q6P9H5 292 aa18.59■□□□□ 0.57
RGP1-201ENST00000378078 FAM114A1Q8IWE2 563 aa18.59■□□□□ 0.57
RGP1-201ENST00000378078 KLF18A0A0U1RQI7 1052 aa18.59■□□□□ 0.57
RGP1-201ENST00000378078 PKNOX2Q96KN3 472 aa18.59■□□□□ 0.57
RGP1-201ENST00000378078 NCOA2Q15596 1464 aa18.59■□□□□ 0.57
RGP1-201ENST00000378078 ZNF526Q8TF50 670 aaPredicted RBP18.59■□□□□ 0.57
RGP1-201ENST00000378078 FCHSD2O94868 740 aa18.59■□□□□ 0.57
RGP1-201ENST00000378078 EAPPQ56P03 285 aaPredicted RBP18.59■□□□□ 0.57
RGP1-201ENST00000378078 NCOA7Q8NI08 942 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms