RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 DNAJC2Q99543 621 aaKnown RBP11.69□□□□□ -0.54
RNF38-206ENST00000377885 CBFA2T2O43439 604 aa11.69□□□□□ -0.54
RNF38-206ENST00000377885 NBPF7P0C2Y1 421 aaPredicted RBP11.69□□□□□ -0.54
RNF38-206ENST00000377885 AIMP1Q12904 312 aaKnown RBP11.69□□□□□ -0.54
RNF38-206ENST00000377885 DDX41Q9UJV9 622 aaKnown RBP11.69□□□□□ -0.54
RNF38-206ENST00000377885 NR1I2O75469 434 aa11.68□□□□□ -0.54
RNF38-206ENST00000377885 CACTINQ8WUQ7 758 aaKnown RBP11.68□□□□□ -0.54
RNF38-206ENST00000377885 CWC15Q9P013 229 aaKnown RBP11.68□□□□□ -0.54
RNF38-206ENST00000377885 CTNNA3Q9UI47 895 aa11.68□□□□□ -0.54
RNF38-206ENST00000377885 CPLX1O14810 134 aa11.68□□□□□ -0.54
RNF38-206ENST00000377885 PLEKHO1Q53GL0 409 aaPredicted RBP11.68□□□□□ -0.54
RNF38-206ENST00000377885 TMC6Q7Z403 805 aa11.68□□□□□ -0.54
RNF38-206ENST00000377885 PLA2G4DQ86XP0 818 aa11.68□□□□□ -0.54
RNF38-206ENST00000377885 ABTB2Q8N961 1025 aa11.68□□□□□ -0.54
RNF38-206ENST00000377885 MAP3K2Q9Y2U5 619 aa11.68□□□□□ -0.54
RNF38-206ENST00000377885 ELF2Q15723 593 aa11.68□□□□□ -0.54
RNF38-206ENST00000377885 AOPEPQ8N6M6 819 aa11.68□□□□□ -0.54
RNF38-206ENST00000377885 ZNF215Q9UL58 517 aaPredicted RBP11.68□□□□□ -0.54
RNF38-206ENST00000377885 CLTCQ00610 1675 aaKnown RBP11.68□□□□□ -0.54
RNF38-206ENST00000377885 OLFM4Q6UX06 510 aa11.67□□□□□ -0.54
RNF38-206ENST00000377885 FAM193AP78312 1265 aa11.67□□□□□ -0.54
RNF38-206ENST00000377885 ATL3Q6DD88 541 aa11.67□□□□□ -0.54
RNF38-206ENST00000377885 CCAR2Q8N163 923 aaKnown RBP11.67□□□□□ -0.54
RNF38-206ENST00000377885 FAM227BQ96M60 508 aa11.67□□□□□ -0.54
RNF38-206ENST00000377885 IL25Q9H293 177 aa11.67□□□□□ -0.54
RNF38-206ENST00000377885 PA2G4Q9UQ80 394 aaKnown RBP11.67□□□□□ -0.54
RNF38-206ENST00000377885 DHX16O60231 1041 aaKnown RBP11.67□□□□□ -0.54
RNF38-206ENST00000377885 SERPINC1P01008 464 aa11.67□□□□□ -0.54
RNF38-206ENST00000377885 LRRFIP1Q32MZ4 808 aaKnown RBP11.67□□□□□ -0.54
RNF38-206ENST00000377885 ZNF530Q6P9A1 599 aaPredicted RBP11.67□□□□□ -0.54
RNF38-206ENST00000377885 CCDC9Q9Y3X0 531 aaKnown RBP11.67□□□□□ -0.54
RNF38-206ENST00000377885 KNDC1Q76NI1 1749 aa11.66□□□□□ -0.54
RNF38-206ENST00000377885 PLEKHG3A1L390 1219 aa11.66□□□□□ -0.54
RNF38-206ENST00000377885 HOXB7P09629 217 aa11.66□□□□□ -0.54
RNF38-206ENST00000377885 Q6ZUG5 572 aa11.66□□□□□ -0.54
RNF38-206ENST00000377885 MAP4K1Q92918 833 aa11.66□□□□□ -0.54
RNF38-206ENST00000377885 USP16Q9Y5T5 823 aa11.66□□□□□ -0.54
RNF38-206ENST00000377885 IMPACTQ9P2X3 320 aa11.66□□□□□ -0.54
RNF38-206ENST00000377885 NECTIN1Q15223 517 aa11.66□□□□□ -0.54
RNF38-206ENST00000377885 AK7Q96M32 723 aa11.66□□□□□ -0.54
RNF38-206ENST00000377885 FAM160A1Q05DH4 1040 aa11.66□□□□□ -0.54
RNF38-206ENST00000377885 HOOK1Q9UJC3 728 aaKnown RBP11.66□□□□□ -0.54
RNF38-206ENST00000377885 MORC2Q9Y6X9 1032 aaPredicted RBP11.66□□□□□ -0.54
RNF38-206ENST00000377885 AP5Z1O43299 807 aa11.65□□□□□ -0.54
RNF38-206ENST00000377885 ZSCAN12O43309 604 aa11.65□□□□□ -0.54
RNF38-206ENST00000377885 MRPS27Q92552 414 aaKnown RBP11.65□□□□□ -0.54
RNF38-206ENST00000377885 SRRTQ9BXP5 876 aaKnown RBP11.65□□□□□ -0.54
RNF38-206ENST00000377885 URI1O94763 535 aaPredicted RBP11.65□□□□□ -0.54
RNF38-206ENST00000377885 ANXA1P04083 346 aa11.65□□□□□ -0.54
RNF38-206ENST00000377885 BEND3Q5T5X7 828 aa11.65□□□□□ -0.55
RNF38-206ENST00000377885 SARM1Q6SZW1 724 aa11.65□□□□□ -0.55
RNF38-206ENST00000377885 CCDC34Q96HJ3 373 aa11.65□□□□□ -0.55
RNF38-206ENST00000377885 LLPHQ9BRT6 129 aaKnown RBP11.65□□□□□ -0.55
RNF38-206ENST00000377885 KSR2Q6VAB6 950 aa11.64□□□□□ -0.55
RNF38-206ENST00000377885 GTF3C6Q969F1 213 aa11.64□□□□□ -0.55
RNF38-206ENST00000377885 SLC3A2P08195 630 aaKnown RBP11.64□□□□□ -0.55
RNF38-206ENST00000377885 CPLX2Q6PUV4 134 aaKnown RBP11.64□□□□□ -0.55
RNF38-206ENST00000377885 SYT10Q6XYQ8 523 aa11.64□□□□□ -0.55
RNF38-206ENST00000377885 USHBP1Q8N6Y0 703 aa11.64□□□□□ -0.55
RNF38-206ENST00000377885 IGSF1Q8N6C5 1336 aa11.64□□□□□ -0.55
RNF38-206ENST00000377885 METP08581 1390 aa11.64□□□□□ -0.55
RNF38-206ENST00000377885 GOLGA6L1Q8N7Z2 621 aa11.64□□□□□ -0.55
RNF38-206ENST00000377885 JMYQ8N9B5 988 aa11.64□□□□□ -0.55
RNF38-206ENST00000377885 TERF2Q15554 542 aa11.64□□□□□ -0.55
RNF38-206ENST00000377885 ARHGAP29Q52LW3 1261 aa11.64□□□□□ -0.55
RNF38-206ENST00000377885 LMOD2Q6P5Q4 547 aa11.64□□□□□ -0.55
RNF38-206ENST00000377885 PDILTQ8N807 584 aa11.64□□□□□ -0.55
RNF38-206ENST00000377885 IL17REQ8NFR9 667 aa11.64□□□□□ -0.55
RNF38-206ENST00000377885 CPS1P31327 1500 aa11.63□□□□□ -0.55
RNF38-206ENST00000377885 PXDNLA1KZ92 1463 aa11.63□□□□□ -0.55
RNF38-206ENST00000377885 GRM8O00222 908 aa11.63□□□□□ -0.55
RNF38-206ENST00000377885 JAK2O60674 1132 aa11.63□□□□□ -0.55
RNF38-206ENST00000377885 PRR36Q9H6K5 1346 aa11.63□□□□□ -0.55
RNF38-206ENST00000377885 GUCY1B3Q02153 619 aa11.63□□□□□ -0.55
RNF38-206ENST00000377885 NAA16Q6N069 864 aaPredicted RBP11.63□□□□□ -0.55
RNF38-206ENST00000377885 TXLNBQ8N3L3 684 aa11.63□□□□□ -0.55
RNF38-206ENST00000377885 NEUROD6Q96NK8 337 aa11.63□□□□□ -0.55
RNF38-206ENST00000377885 USP42Q9H9J4 1324 aaKnown RBP11.63□□□□□ -0.55
RNF38-206ENST00000377885 POLR3GO15318 223 aaPredicted RBP11.63□□□□□ -0.55
RNF38-206ENST00000377885 CFAP100Q494V2 611 aa11.63□□□□□ -0.55
RNF38-206ENST00000377885 DNAI1Q9UI46 699 aa11.63□□□□□ -0.55
RNF38-206ENST00000377885 CCT2P78371 535 aaKnown RBP11.62□□□□□ -0.55
RNF38-206ENST00000377885 GIGYF1O75420 1035 aaPredicted RBP11.62□□□□□ -0.55
RNF38-206ENST00000377885 SLFNL1Q499Z3 407 aa11.62□□□□□ -0.55
RNF38-206ENST00000377885 TRIM29Q14134 588 aa11.62□□□□□ -0.55
RNF38-206ENST00000377885 NOM1Q5C9Z4 860 aaKnown RBP11.62□□□□□ -0.55
RNF38-206ENST00000377885 IFNKQ9P0W0 207 aa11.62□□□□□ -0.55
RNF38-206ENST00000377885 USP6P35125 1406 aa11.62□□□□□ -0.55
RNF38-206ENST00000377885 HOXC9P31274 260 aa11.62□□□□□ -0.55
RNF38-206ENST00000377885 RALYLQ86SE5 291 aaKnown RBP11.62□□□□□ -0.55
RNF38-206ENST00000377885 LINS1Q8NG48 757 aa11.62□□□□□ -0.55
RNF38-206ENST00000377885 KCNG4Q8TDN1 519 aa11.62□□□□□ -0.55
RNF38-206ENST00000377885 TMEM131LA2VDJ0 1609 aa11.62□□□□□ -0.55
RNF38-206ENST00000377885 A0A0D9SFI3 127 aa11.61□□□□□ -0.55
RNF38-206ENST00000377885 PTPDC1A2A3K4 754 aa11.61□□□□□ -0.55
RNF38-206ENST00000377885 CCDC144BQ3MJ40 725 aa11.61□□□□□ -0.55
RNF38-206ENST00000377885 MCMDC2Q4G0Z9 681 aa11.61□□□□□ -0.55
RNF38-206ENST00000377885 C11orf57Q6ZUT1 292 aaPredicted RBP11.61□□□□□ -0.55
RNF38-206ENST00000377885 CCDC144CPQ8IYA2 1237 aa11.61□□□□□ -0.55
RNF38-206ENST00000377885 FAM177A1Q8N128 213 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms