RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 HSP90AB4PQ58FF6 505 aa26.02■■□□□ 1.76
RNF38-205ENST00000377877 COL23A1Q86Y22 540 aaPredicted RBP26.02■■□□□ 1.76
RNF38-205ENST00000377877 CTSWP56202 376 aa26.02■■□□□ 1.76
RNF38-205ENST00000377877 NFIXQ14938 502 aa26.02■■□□□ 1.76
RNF38-205ENST00000377877 KIF1BPQ96EK5 621 aa26.02■■□□□ 1.76
RNF38-205ENST00000377877 GREM2Q9H772 168 aa26.01■■□□□ 1.75
RNF38-205ENST00000377877 SF3B2Q13435 895 aaKnown RBP26■■□□□ 1.75
RNF38-205ENST00000377877 MYH3P11055 1940 aa25.99■■□□□ 1.75
RNF38-205ENST00000377877 CCDC57Q2TAC2 916 aa25.99■■□□□ 1.75
RNF38-205ENST00000377877 CCDC24Q8N4L8 307 aa25.99■■□□□ 1.75
RNF38-205ENST00000377877 ANO8Q9HCE9 1232 aaPredicted RBP25.99■■□□□ 1.75
RNF38-205ENST00000377877 TUBGCP6Q96RT7 1819 aa25.99■■□□□ 1.75
RNF38-205ENST00000377877 DDX60Q8IY21 1712 aaKnown RBP25.98■■□□□ 1.75
RNF38-205ENST00000377877 NBPF5PQ86XG9 351 aaPredicted RBP25.98■■□□□ 1.75
RNF38-205ENST00000377877 PUS3Q9BZE2 481 aaKnown RBP25.98■■□□□ 1.75
RNF38-205ENST00000377877 BAG6P46379 1132 aa25.97■■□□□ 1.75
RNF38-205ENST00000377877 ATG9AQ7Z3C6 839 aa25.97■■□□□ 1.75
RNF38-205ENST00000377877 ITGA6P23229 1130 aa25.96■■□□□ 1.75
RNF38-205ENST00000377877 IFIT5Q13325 482 aaKnown RBP25.96■■□□□ 1.75
RNF38-205ENST00000377877 LRRC24Q50LG9 513 aa25.96■■□□□ 1.75
RNF38-205ENST00000377877 C3orf67Q6ZVT6 689 aa25.96■■□□□ 1.75
RNF38-205ENST00000377877 ERC1Q8IUD2 1116 aa25.96■■□□□ 1.75
RNF38-205ENST00000377877 PNPLA7Q6ZV29 1317 aa25.96■■□□□ 1.75
RNF38-205ENST00000377877 SALL3Q9BXA9 1300 aa25.96■■□□□ 1.75
RNF38-205ENST00000377877 GTF2E1P29083 439 aaPredicted RBP25.96■■□□□ 1.75
RNF38-205ENST00000377877 TM4SF1P30408 202 aa25.96■■□□□ 1.75
RNF38-205ENST00000377877 SLC10A5Q5PT55 438 aa25.96■■□□□ 1.75
RNF38-205ENST00000377877 COL24A1Q17RW2 1714 aa25.95■■□□□ 1.75
RNF38-205ENST00000377877 TPTE2Q6XPS3 522 aa25.95■■□□□ 1.75
RNF38-205ENST00000377877 NYXQ9GZU5 481 aa25.95■■□□□ 1.75
RNF38-205ENST00000377877 ABCC12Q96J65 1359 aa25.94■■□□□ 1.74
RNF38-205ENST00000377877 TFCP2Q12800 502 aa25.94■■□□□ 1.74
RNF38-205ENST00000377877 SLC15A2Q16348 729 aa25.94■■□□□ 1.74
RNF38-205ENST00000377877 TSHZ3Q63HK5 1081 aa25.94■■□□□ 1.74
RNF38-205ENST00000377877 EYA2O00167 538 aa25.93■■□□□ 1.74
RNF38-205ENST00000377877 PDE1AP54750 535 aa25.93■■□□□ 1.74
RNF38-205ENST00000377877 SEC31BQ9NQW1 1179 aa25.93■■□□□ 1.74
RNF38-205ENST00000377877 EAF2Q96CJ1 260 aaPredicted RBP25.93■■□□□ 1.74
RNF38-205ENST00000377877 ANKRD18BA2A2Z9 1011 aa25.92■■□□□ 1.74
RNF38-205ENST00000377877 CLASRPQ8N2M8 674 aaKnown RBP25.92■■□□□ 1.74
RNF38-205ENST00000377877 FLAD1Q8NFF5 587 aa25.92■■□□□ 1.74
RNF38-205ENST00000377877 CARMIL3Q8ND23 1372 aa25.91■■□□□ 1.74
RNF38-205ENST00000377877 C8orf34Q49A92 452 aa25.91■■□□□ 1.74
RNF38-205ENST00000377877 DDR1Q08345 913 aa25.91■■□□□ 1.74
RNF38-205ENST00000377877 TAF7LQ5H9L4 462 aa25.91■■□□□ 1.74
RNF38-205ENST00000377877 BACH2Q9BYV9 841 aa25.91■■□□□ 1.74
RNF38-205ENST00000377877 HSP90B1P14625 803 aaKnown RBP25.9■■□□□ 1.74
RNF38-205ENST00000377877 GSPT1P15170 499 aaKnown RBP25.9■■□□□ 1.74
RNF38-205ENST00000377877 MX1P20591 662 aa25.9■■□□□ 1.74
RNF38-205ENST00000377877 OSBPL3Q9H4L5 887 aa25.9■■□□□ 1.74
RNF38-205ENST00000377877 STK32BQ9NY57 414 aa25.9■■□□□ 1.74
RNF38-205ENST00000377877 LAMB2P55268 1798 aa25.9■■□□□ 1.74
RNF38-205ENST00000377877 CIAO1O76071 339 aa25.89■■□□□ 1.74
RNF38-205ENST00000377877 SERPINB2P05120 415 aa25.89■■□□□ 1.74
RNF38-205ENST00000377877 CCDC152Q4G0S7 254 aa25.89■■□□□ 1.74
RNF38-205ENST00000377877 AACSQ86V21 672 aa25.89■■□□□ 1.74
RNF38-205ENST00000377877 CCDC8Q9H0W5 538 aaPredicted RBP25.89■■□□□ 1.74
RNF38-205ENST00000377877 STAP2Q9UGK3 403 aa25.89■■□□□ 1.74
RNF38-205ENST00000377877 IL15P40933 162 aaPredicted RBP25.89■■□□□ 1.73
RNF38-205ENST00000377877 SF3B3Q15393 1217 aaKnown RBP25.89■■□□□ 1.73
RNF38-205ENST00000377877 TTC22Q5TAA0 569 aa25.89■■□□□ 1.73
RNF38-205ENST00000377877 PRR5LQ6MZQ0 368 aa25.88■■□□□ 1.73
RNF38-205ENST00000377877 LDHAL6AQ6ZMR3 332 aa25.88■■□□□ 1.73
RNF38-205ENST00000377877 RIPOR2Q9Y4F9 1068 aa25.88■■□□□ 1.73
RNF38-205ENST00000377877 POLRMTO00411 1230 aaKnown RBP25.87■■□□□ 1.73
RNF38-205ENST00000377877 BMP2KLQ5H9B9 411 aa25.87■■□□□ 1.73
RNF38-205ENST00000377877 NLGN1Q8N2Q7 840 aa25.87■■□□□ 1.73
RNF38-205ENST00000377877 CCDC125Q86Z20 511 aa25.87■■□□□ 1.73
RNF38-205ENST00000377877 CNBD1Q8NA66 436 aa25.87■■□□□ 1.73
RNF38-205ENST00000377877 TLR7Q9NYK1 1049 aaKnown RBP25.87■■□□□ 1.73
RNF38-205ENST00000377877 NPHP1O15259 732 aa25.86■■□□□ 1.73
RNF38-205ENST00000377877 TNNI3KQ59H18 835 aa25.86■■□□□ 1.73
RNF38-205ENST00000377877 NLRP3Q96P20 1036 aa25.86■■□□□ 1.73
RNF38-205ENST00000377877 FPGT-TNNI3KV9GXZ4 949 aa25.86■■□□□ 1.73
RNF38-205ENST00000377877 TAF1P21675 1872 aa25.86■■□□□ 1.73
RNF38-205ENST00000377877 COL4A1P02462 1669 aa25.86■■□□□ 1.73
RNF38-205ENST00000377877 CASZ1Q86V15 1759 aa25.86■■□□□ 1.73
RNF38-205ENST00000377877 IFIT2P09913 472 aaKnown RBP25.86■■□□□ 1.73
RNF38-205ENST00000377877 FBXO3Q9UK99 471 aa25.86■■□□□ 1.73
RNF38-205ENST00000377877 MSL1Q68DK7 614 aa25.85■■□□□ 1.73
RNF38-205ENST00000377877 PDGFDQ9GZP0 370 aaPredicted RBP25.85■■□□□ 1.73
RNF38-205ENST00000377877 RTL9Q8NET4 1388 aa25.85■■□□□ 1.73
RNF38-205ENST00000377877 TIMM10P62072 90 aa25.84■■□□□ 1.73
RNF38-205ENST00000377877 CNNM1Q9NRU3 951 aa25.84■■□□□ 1.73
RNF38-205ENST00000377877 PI4K2BQ8TCG2 481 aa25.83■■□□□ 1.73
RNF38-205ENST00000377877 CEP126Q9P2H0 1117 aa25.83■■□□□ 1.73
RNF38-205ENST00000377877 SDSP20132 328 aa25.81■■□□□ 1.72
RNF38-205ENST00000377877 DBNLQ9UJU6 430 aaKnown RBP25.81■■□□□ 1.72
RNF38-205ENST00000377877 TNRC6CQ9HCJ0 1690 aaKnown RBP25.81■■□□□ 1.72
RNF38-205ENST00000377877 SEC24BO95487 1268 aa25.8■■□□□ 1.72
RNF38-205ENST00000377877 MMP10P09238 476 aa25.8■■□□□ 1.72
RNF38-205ENST00000377877 GPR108Q9NPR9 543 aa25.8■■□□□ 1.72
RNF38-205ENST00000377877 HELBQ8NG08 1087 aaPredicted RBP25.8■■□□□ 1.72
RNF38-205ENST00000377877 CELF1Q92879 486 aaKnown RBP25.8■■□□□ 1.72
RNF38-205ENST00000377877 MPHOSPH8Q99549 860 aa25.8■■□□□ 1.72
RNF38-205ENST00000377877 DBNDD2Q9BQY9 259 aa25.8■■□□□ 1.72
RNF38-205ENST00000377877 ECHDC1Q9NTX5 307 aa25.8■■□□□ 1.72
RNF38-205ENST00000377877 METTL24Q5JXM2 366 aa25.79■■□□□ 1.72
RNF38-205ENST00000377877 NEUROD6Q96NK8 337 aa25.79■■□□□ 1.72
RNF38-205ENST00000377877 RIC1Q4ADV7 1423 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms