RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 CETN1Q12798 172 aa20.49■□□□□ 0.87
CNTNAP3-204ENST00000377656 MTHFSDQ2M296 383 aaKnown RBP20.49■□□□□ 0.87
CNTNAP3-204ENST00000377656 FLT4P35916 1363 aa20.49■□□□□ 0.87
CNTNAP3-204ENST00000377656 SHANK2Q9UPX8 1470 aa20.49■□□□□ 0.87
CNTNAP3-204ENST00000377656 ZBTB43O43298 467 aa20.49■□□□□ 0.87
CNTNAP3-204ENST00000377656 RBM25P49756 843 aaKnown RBP20.49■□□□□ 0.87
CNTNAP3-204ENST00000377656 TAF3Q5VWG9 929 aa20.49■□□□□ 0.87
CNTNAP3-204ENST00000377656 NLRP3Q96P20 1036 aa20.49■□□□□ 0.87
CNTNAP3-204ENST00000377656 MCMDC2Q4G0Z9 681 aa20.49■□□□□ 0.87
CNTNAP3-204ENST00000377656 NECAB1Q8N987 351 aa20.49■□□□□ 0.87
CNTNAP3-204ENST00000377656 EZRP15311 586 aaKnown RBP20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 CYP7A1P22680 504 aa20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 PAFAH1B1P43034 410 aa20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 ESR2Q92731 530 aa20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 ZNF622Q969S3 477 aaKnown RBP eCLIP20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 RRP9O43818 475 aaKnown RBP20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 ZSCAN22P10073 491 aaPredicted RBP20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 CHMP4BP1P59074 171 aa20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 ZRANB1Q9UGI0 708 aa20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 UHRF1BP1Q6BDS2 1440 aa20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 PZPP20742 1482 aa20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 CASQ1P31415 396 aa20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 ST5P78524 1137 aa20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 TTLL12Q14166 644 aaPredicted RBP20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 SETDB2Q96T68 719 aa20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 GBP2P32456 591 aaPredicted RBP20.48■□□□□ 0.87
CNTNAP3-204ENST00000377656 ATP6V1AP38606 617 aa20.47■□□□□ 0.87
CNTNAP3-204ENST00000377656 SMARCC1Q92922 1105 aaPredicted RBP20.47■□□□□ 0.87
CNTNAP3-204ENST00000377656 TCEANC2Q96MN5 208 aa20.47■□□□□ 0.87
CNTNAP3-204ENST00000377656 CNNM2Q9H8M5 875 aa20.47■□□□□ 0.87
CNTNAP3-204ENST00000377656 ZNF518AQ6AHZ1 1483 aa20.47■□□□□ 0.87
CNTNAP3-204ENST00000377656 CCDC40Q4G0X9 1142 aa20.47■□□□□ 0.87
CNTNAP3-204ENST00000377656 TCERG1LQ5VWI1 586 aa20.47■□□□□ 0.87
CNTNAP3-204ENST00000377656 TMC6Q7Z403 805 aa20.47■□□□□ 0.87
CNTNAP3-204ENST00000377656 LUZP1Q86V48 1076 aa20.47■□□□□ 0.87
CNTNAP3-204ENST00000377656 MAP9Q49MG5 647 aa20.46■□□□□ 0.87
CNTNAP3-204ENST00000377656 TNNT1P13805 278 aa20.46■□□□□ 0.87
CNTNAP3-204ENST00000377656 ZGPATQ8N5A5 531 aaKnown RBP20.46■□□□□ 0.87
CNTNAP3-204ENST00000377656 TRMT1Q9NXH9 659 aaKnown RBP20.46■□□□□ 0.87
CNTNAP3-204ENST00000377656 SLC4A8Q2Y0W8 1093 aa20.46■□□□□ 0.87
CNTNAP3-204ENST00000377656 VAMP4O75379 141 aa20.46■□□□□ 0.87
CNTNAP3-204ENST00000377656 SLC9C2Q5TAH2 1124 aa20.46■□□□□ 0.87
CNTNAP3-204ENST00000377656 LRRC2Q9BYS8 371 aa20.46■□□□□ 0.87
CNTNAP3-204ENST00000377656 IQSEC3Q9UPP2 1182 aaPredicted RBP20.46■□□□□ 0.87
CNTNAP3-204ENST00000377656 ADCY5O95622 1261 aa20.45■□□□□ 0.86
CNTNAP3-204ENST00000377656 SLC4A4Q9Y6R1 1079 aa20.45■□□□□ 0.86
CNTNAP3-204ENST00000377656 TEX14Q8IWB6 1497 aa20.45■□□□□ 0.86
CNTNAP3-204ENST00000377656 BMP15O95972 392 aa20.45■□□□□ 0.86
CNTNAP3-204ENST00000377656 STXBP4Q6ZWJ1 553 aa20.45■□□□□ 0.86
CNTNAP3-204ENST00000377656 LRRC59Q96AG4 307 aaKnown RBP20.45■□□□□ 0.86
CNTNAP3-204ENST00000377656 KIAA0556O60303 1618 aa20.45■□□□□ 0.86
CNTNAP3-204ENST00000377656 CCDC178Q5BJE1 867 aa20.45■□□□□ 0.86
CNTNAP3-204ENST00000377656 FAM114A1Q8IWE2 563 aa20.45■□□□□ 0.86
CNTNAP3-204ENST00000377656 NFATC2IPQ8NCF5 419 aa20.45■□□□□ 0.86
CNTNAP3-204ENST00000377656 SYCP2Q9BX26 1530 aa20.45■□□□□ 0.86
CNTNAP3-204ENST00000377656 SYKP43405 635 aa20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 DDB1Q16531 1140 aa20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 ALG1Q9BT22 464 aa20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 LRRC27Q9C0I9 530 aa20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 DNMT1P26358 1616 aaKnown RBP20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 ACSBG1Q96GR2 724 aa20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 NIP7Q9Y221 180 aaKnown RBP eCLIP20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 RNF123Q5XPI4 1314 aa20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 UVSSAQ2YD98 709 aa20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 CCDC150Q8NCX0 1101 aa20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 MCM3P25205 808 aa20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 NAA16Q6N069 864 aaPredicted RBP20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 C16orf45Q96MC5 204 aaPredicted RBP20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.44■□□□□ 0.86
CNTNAP3-204ENST00000377656 IL2RBP14784 551 aa20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 DNA2P51530 1060 aa20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 NPATQ14207 1427 aa20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 IFIT1BQ5T764 474 aaKnown RBP20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 DCTPP1Q9H773 170 aa20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 RBM27Q9P2N5 1060 aaKnown RBP20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 PA2G4Q9UQ80 394 aaKnown RBP20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 TSPY3P0CV98 308 aa20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 TSPY8P0CW00 308 aa20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 GNAQP50148 359 aa20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 RTN1Q16799 776 aa20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 ISM2Q6H9L7 571 aa20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 TRMT1LQ7Z2T5 733 aaKnown RBP20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 KCNG4Q8TDN1 519 aa20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 C19orf44Q9H6X5 657 aa20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 COL17A1Q9UMD9 1497 aaPredicted RBP20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 TOM1O60784 492 aa20.43■□□□□ 0.86
CNTNAP3-204ENST00000377656 TTC41PQ6P2S7 1318 aa20.42■□□□□ 0.86
CNTNAP3-204ENST00000377656 C16orf71Q8IYS4 520 aaPredicted RBP20.42■□□□□ 0.86
CNTNAP3-204ENST00000377656 TSPYL6Q8N831 410 aa20.42■□□□□ 0.86
CNTNAP3-204ENST00000377656 HCLS1P14317 486 aaPredicted RBP20.42■□□□□ 0.86
CNTNAP3-204ENST00000377656 MYO1BO43795 1136 aa20.42■□□□□ 0.86
CNTNAP3-204ENST00000377656 EYA1Q99502 592 aa20.42■□□□□ 0.86
CNTNAP3-204ENST00000377656 TRAPPC8Q9Y2L5 1435 aa20.42■□□□□ 0.86
CNTNAP3-204ENST00000377656 GOLGA6L9A6NEM1 432 aa20.41■□□□□ 0.86
CNTNAP3-204ENST00000377656 TRAF1Q13077 416 aa20.41■□□□□ 0.86
CNTNAP3-204ENST00000377656 CABLES1Q8TDN4 633 aa20.41■□□□□ 0.86
CNTNAP3-204ENST00000377656 PAG1Q9NWQ8 432 aa20.41■□□□□ 0.86
CNTNAP3-204ENST00000377656 SAMM50Q9Y512 469 aa20.41■□□□□ 0.86
CNTNAP3-204ENST00000377656 GCP02774 474 aa20.41■□□□□ 0.86
CNTNAP3-204ENST00000377656 GIMAP6Q6P9H5 292 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms