RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 PTPN23Q9H3S7 1636 aa21.78■■□□□ 1.08
TBC1D4-201ENST00000377625 RNF187Q5TA31 235 aaPredicted RBP21.78■■□□□ 1.08
TBC1D4-201ENST00000377625 ERMNQ8TAM6 284 aa21.78■■□□□ 1.08
TBC1D4-201ENST00000377625 C14orf93Q9H972 538 aaKnown RBP21.78■■□□□ 1.08
TBC1D4-201ENST00000377625 CYP7A1P22680 504 aa21.77■■□□□ 1.08
TBC1D4-201ENST00000377625 RBM27Q9P2N5 1060 aaKnown RBP21.77■■□□□ 1.08
TBC1D4-201ENST00000377625 ZBTB43O43298 467 aa21.77■■□□□ 1.08
TBC1D4-201ENST00000377625 SYKP43405 635 aa21.77■■□□□ 1.08
TBC1D4-201ENST00000377625 SMARCC1Q92922 1105 aaPredicted RBP21.77■■□□□ 1.08
TBC1D4-201ENST00000377625 MPHOSPH6Q99547 160 aaKnown RBP21.77■■□□□ 1.08
TBC1D4-201ENST00000377625 CHPF2Q9P2E5 772 aa21.77■■□□□ 1.08
TBC1D4-201ENST00000377625 ZFYP08048 801 aaPredicted RBP21.77■■□□□ 1.08
TBC1D4-201ENST00000377625 RBM25P49756 843 aaKnown RBP21.77■■□□□ 1.08
TBC1D4-201ENST00000377625 CCDC175P0C221 793 aa21.76■■□□□ 1.07
TBC1D4-201ENST00000377625 CAVIN2O95810 425 aa21.76■■□□□ 1.07
TBC1D4-201ENST00000377625 IFIT1BQ5T764 474 aaKnown RBP21.76■■□□□ 1.07
TBC1D4-201ENST00000377625 NECAB1Q8N987 351 aa21.76■■□□□ 1.07
TBC1D4-201ENST00000377625 SLC4A4Q9Y6R1 1079 aa21.76■■□□□ 1.07
TBC1D4-201ENST00000377625 PLB1Q6P1J6 1458 aa21.76■■□□□ 1.07
TBC1D4-201ENST00000377625 FSD2A1L4K1 749 aa21.76■■□□□ 1.07
TBC1D4-201ENST00000377625 RRAGBQ5VZM2 374 aa21.76■■□□□ 1.07
TBC1D4-201ENST00000377625 MICALCLQ6ZW33 695 aa21.76■■□□□ 1.07
TBC1D4-201ENST00000377625 ANKRD36BQ8N2N9 1353 aa21.76■■□□□ 1.07
TBC1D4-201ENST00000377625 IGHDP01880 384 aa21.75■■□□□ 1.07
TBC1D4-201ENST00000377625 ESR2Q92731 530 aa21.75■■□□□ 1.07
TBC1D4-201ENST00000377625 CTR9Q6PD62 1173 aa21.75■■□□□ 1.07
TBC1D4-201ENST00000377625 MAATS1Q7Z4T9 603 aa21.75■■□□□ 1.07
TBC1D4-201ENST00000377625 AKR1B10O60218 316 aa21.75■■□□□ 1.07
TBC1D4-201ENST00000377625 ATP2B3Q16720 1220 aa21.75■■□□□ 1.07
TBC1D4-201ENST00000377625 XAGE3Q8WTP9 111 aa21.75■■□□□ 1.07
TBC1D4-201ENST00000377625 HOMER2Q9NSB8 354 aa21.75■■□□□ 1.07
TBC1D4-201ENST00000377625 CADPS2Q86UW7 1296 aa21.75■■□□□ 1.07
TBC1D4-201ENST00000377625 FERMT1Q9BQL6 677 aa21.75■■□□□ 1.07
TBC1D4-201ENST00000377625 ALG1Q9BT22 464 aa21.75■■□□□ 1.07
TBC1D4-201ENST00000377625 ZSCAN22P10073 491 aaPredicted RBP21.74■■□□□ 1.07
TBC1D4-201ENST00000377625 TMTC2Q8N394 836 aa21.74■■□□□ 1.07
TBC1D4-201ENST00000377625 TMX3Q96JJ7 454 aa21.74■■□□□ 1.07
TBC1D4-201ENST00000377625 CC2D2AQ9P2K1 1620 aa21.74■■□□□ 1.07
TBC1D4-201ENST00000377625 LRRC2Q9BYS8 371 aa21.74■■□□□ 1.07
TBC1D4-201ENST00000377625 CCDC172P0C7W6 258 aa21.74■■□□□ 1.07
TBC1D4-201ENST00000377625 ACTN2P35609 894 aa21.74■■□□□ 1.07
TBC1D4-201ENST00000377625 AFMP43652 599 aa21.74■■□□□ 1.07
TBC1D4-201ENST00000377625 CNNM2Q9H8M5 875 aa21.74■■□□□ 1.07
TBC1D4-201ENST00000377625 IQSEC3Q9UPP2 1182 aaPredicted RBP21.74■■□□□ 1.07
TBC1D4-201ENST00000377625 PCF11O94913 1555 aaKnown RBP21.74■■□□□ 1.07
TBC1D4-201ENST00000377625 GNG11P61952 73 aa21.74■■□□□ 1.07
TBC1D4-201ENST00000377625 IFI16Q16666 785 aaKnown RBP21.74■■□□□ 1.07
TBC1D4-201ENST00000377625 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.74■■□□□ 1.075e-6■□□□□ 10.5
TBC1D4-201ENST00000377625 BMP15O95972 392 aa21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 SDSP20132 328 aa21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 STAT6P42226 847 aa21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 UVSSAQ2YD98 709 aa21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 EHBP1Q8NDI1 1231 aa21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 RTN1Q16799 776 aa21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 ZGPATQ8N5A5 531 aaKnown RBP21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 MEIS3Q99687 375 aa21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 NUCB1Q02818 461 aa21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 COPS6Q7L5N1 327 aa21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 HEATR3Q7Z4Q2 680 aa21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 GIMAP7Q8NHV1 300 aa21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 ZCRB1Q8TBF4 217 aaKnown RBP21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 TBC1D5Q92609 795 aa21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 SETDB2Q96T68 719 aa21.73■■□□□ 1.07
TBC1D4-201ENST00000377625 GIMAP6Q6P9H5 292 aa21.72■■□□□ 1.07
TBC1D4-201ENST00000377625 TBC1D32Q96NH3 1257 aa21.72■■□□□ 1.07
TBC1D4-201ENST00000377625 ARHGAP45Q92619 1136 aa21.72■■□□□ 1.07
TBC1D4-201ENST00000377625 SPAG5Q96R06 1193 aa21.72■■□□□ 1.07
TBC1D4-201ENST00000377625 DISP3Q9P2K9 1392 aa21.72■■□□□ 1.07
TBC1D4-201ENST00000377625 F8W031 263 aaPredicted RBP21.72■■□□□ 1.07
TBC1D4-201ENST00000377625 FBLN1P23142 703 aa21.71■■□□□ 1.07
TBC1D4-201ENST00000377625 ZSWIM4Q9H7M6 989 aa21.71■■□□□ 1.07
TBC1D4-201ENST00000377625 ATP6V1AP38606 617 aa21.71■■□□□ 1.07
TBC1D4-201ENST00000377625 UBASH3AP57075 661 aa21.71■■□□□ 1.07
TBC1D4-201ENST00000377625 TRAF1Q13077 416 aa21.71■■□□□ 1.07
TBC1D4-201ENST00000377625 RBM8AQ9Y5S9 174 aaKnown RBP21.71■■□□□ 1.07
TBC1D4-201ENST00000377625 KIAA0753Q2KHM9 967 aa21.71■■□□□ 1.07
TBC1D4-201ENST00000377625 KCNG4Q8TDN1 519 aa21.71■■□□□ 1.07
TBC1D4-201ENST00000377625 TCEANC2Q96MN5 208 aa21.71■■□□□ 1.07
TBC1D4-201ENST00000377625 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.71■■□□□ 1.07
TBC1D4-201ENST00000377625 HCLS1P14317 486 aaPredicted RBP21.71■■□□□ 1.07
TBC1D4-201ENST00000377625 KLHL40Q2TBA0 621 aa21.71■■□□□ 1.07
TBC1D4-201ENST00000377625 MCMDC2Q4G0Z9 681 aa21.71■■□□□ 1.07
TBC1D4-201ENST00000377625 CEP135Q66GS9 1140 aa21.7■■□□□ 1.07
TBC1D4-201ENST00000377625 PSMD1Q99460 953 aa21.7■■□□□ 1.06
TBC1D4-201ENST00000377625 DMRT2Q9Y5R5 561 aa21.7■■□□□ 1.06
TBC1D4-201ENST00000377625 NAA16Q6N069 864 aaPredicted RBP21.7■■□□□ 1.06
TBC1D4-201ENST00000377625 SYNCQ9H7C4 482 aa21.7■■□□□ 1.06
TBC1D4-201ENST00000377625 PRDM10Q9NQV6 1147 aa21.7■■□□□ 1.06
TBC1D4-201ENST00000377625 LMAN1P49257 510 aa21.7■■□□□ 1.06
TBC1D4-201ENST00000377625 PPP4R3BQ5MIZ7 849 aa21.7■■□□□ 1.06
TBC1D4-201ENST00000377625 USP37Q86T82 979 aa21.7■■□□□ 1.06
TBC1D4-201ENST00000377625 GNAQP50148 359 aa21.7■■□□□ 1.06
TBC1D4-201ENST00000377625 HDAC1Q13547 482 aaPredicted RBP21.7■■□□□ 1.06
TBC1D4-201ENST00000377625 ZSCAN23Q3MJ62 389 aa21.7■■□□□ 1.06
TBC1D4-201ENST00000377625 LMBR1LQ6UX01 489 aa21.7■■□□□ 1.06
TBC1D4-201ENST00000377625 NLRP3Q96P20 1036 aa21.69■■□□□ 1.06
TBC1D4-201ENST00000377625 CTAGE1Q96RT6 745 aa21.69■■□□□ 1.06
TBC1D4-201ENST00000377625 HDAC9Q9UKV0 1011 aa21.69■■□□□ 1.06
TBC1D4-201ENST00000377625 IKBKGQ9Y6K9 419 aa21.69■■□□□ 1.06
TBC1D4-201ENST00000377625 SLC39A6Q13433 755 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms