RNA–Protein interactions for RNA: ENST00000377447.7

CBWD1-204, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CBWD1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-204ENST00000377447 CREB3L3Q68CJ9 461 aa11.93□□□□□ -0.5
CBWD1-204ENST00000377447 DDX46Q7L014 1031 aaKnown RBP11.93□□□□□ -0.5
CBWD1-204ENST00000377447 PIGBQ92521 554 aa11.93□□□□□ -0.5
CBWD1-204ENST00000377447 TCEANC2Q96MN5 208 aa11.93□□□□□ -0.5
CBWD1-204ENST00000377447 DNAJC10Q8IXB1 793 aa11.92□□□□□ -0.5
CBWD1-204ENST00000377447 MAP4K1Q92918 833 aa11.92□□□□□ -0.5
CBWD1-204ENST00000377447 GDPD2Q9HCC8 539 aa11.92□□□□□ -0.5
CBWD1-204ENST00000377447 KCPQ6ZWJ8 1503 aa11.92□□□□□ -0.5
CBWD1-204ENST00000377447 LARGE1O95461 756 aa11.92□□□□□ -0.5
CBWD1-204ENST00000377447 ATP5JP18859 108 aa11.92□□□□□ -0.5
CBWD1-204ENST00000377447 CCDC83Q8IWF9 413 aa11.92□□□□□ -0.5
CBWD1-204ENST00000377447 CCDC191Q8NCU4 936 aa11.92□□□□□ -0.5
CBWD1-204ENST00000377447 USP21Q9UK80 565 aa11.92□□□□□ -0.5
CBWD1-204ENST00000377447 COL9A3Q14050 684 aaPredicted RBP11.91□□□□□ -0.5
CBWD1-204ENST00000377447 LRRC24Q50LG9 513 aa11.91□□□□□ -0.5
CBWD1-204ENST00000377447 GPT2Q8TD30 523 aa11.91□□□□□ -0.5
CBWD1-204ENST00000377447 FAM89AQ96GI7 184 aa11.91□□□□□ -0.5
CBWD1-204ENST00000377447 RBM27Q9P2N5 1060 aaKnown RBP11.91□□□□□ -0.5
CBWD1-204ENST00000377447 UBR2Q8IWV8 1755 aa11.91□□□□□ -0.5
CBWD1-204ENST00000377447 AFF2P51816 1311 aa11.91□□□□□ -0.5
CBWD1-204ENST00000377447 COL14A1Q05707 1796 aaKnown RBP11.91□□□□□ -0.5
CBWD1-204ENST00000377447 CCDC129Q6ZRS4 1044 aa11.91□□□□□ -0.5
CBWD1-204ENST00000377447 FNBP4Q8N3X1 1017 aaPredicted RBP11.91□□□□□ -0.5
CBWD1-204ENST00000377447 SEC62Q99442 399 aaKnown RBP11.91□□□□□ -0.5
CBWD1-204ENST00000377447 SMC3Q9UQE7 1217 aa11.91□□□□□ -0.5
CBWD1-204ENST00000377447 SHANK3Q9BYB0 1731 aa11.91□□□□□ -0.5
CBWD1-204ENST00000377447 SLC27A2O14975 620 aa11.9□□□□□ -0.5
CBWD1-204ENST00000377447 ZSCAN23Q3MJ62 389 aa11.9□□□□□ -0.5
CBWD1-204ENST00000377447 VPS53Q5VIR6 699 aa11.9□□□□□ -0.5
CBWD1-204ENST00000377447 RNF20Q5VTR2 975 aa11.9□□□□□ -0.5
CBWD1-204ENST00000377447 ATG9AQ7Z3C6 839 aa11.9□□□□□ -0.5
CBWD1-204ENST00000377447 ILDR1Q86SU0 546 aaPredicted RBP11.9□□□□□ -0.5
CBWD1-204ENST00000377447 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
CBWD1-204ENST00000377447 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.9□□□□□ -0.5
CBWD1-204ENST00000377447 TAF6LQ9Y6J9 622 aa11.9□□□□□ -0.5
CBWD1-204ENST00000377447 BCL9LQ86UU0 1499 aa11.9□□□□□ -0.5
CBWD1-204ENST00000377447 SLIT2O94813 1529 aa11.9□□□□□ -0.5
CBWD1-204ENST00000377447 GOLIM4O00461 696 aa11.9□□□□□ -0.5
CBWD1-204ENST00000377447 STARD3NLO95772 234 aa11.9□□□□□ -0.5
CBWD1-204ENST00000377447 GPTP24298 496 aa11.9□□□□□ -0.5
CBWD1-204ENST00000377447 KIF6Q6ZMV9 814 aa11.9□□□□□ -0.5
CBWD1-204ENST00000377447 PUS3Q9BZE2 481 aaKnown RBP11.9□□□□□ -0.5
CBWD1-204ENST00000377447 ISY1Q9ULR0 285 aaKnown RBP11.9□□□□□ -0.5
CBWD1-204ENST00000377447 NSFL1CQ9UNZ2 370 aaKnown RBP11.9□□□□□ -0.5
CBWD1-204ENST00000377447 WDR33Q9C0J8 1336 aaKnown RBP11.89□□□□□ -0.51
CBWD1-204ENST00000377447 CCDC57Q2TAC2 916 aa11.89□□□□□ -0.51
CBWD1-204ENST00000377447 SLFNL1Q499Z3 407 aa11.89□□□□□ -0.51
CBWD1-204ENST00000377447 NECAB1Q8N987 351 aa11.89□□□□□ -0.51
CBWD1-204ENST00000377447 ATG3Q9NT62 314 aa11.89□□□□□ -0.51
CBWD1-204ENST00000377447 TCIRG1Q13488 830 aa11.89□□□□□ -0.51
CBWD1-204ENST00000377447 PLCH1Q4KWH8 1693 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 COL15A1P39059 1388 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 TAF5LO75529 589 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 SYT1P21579 422 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 PSMA5P28066 241 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 IL15P40933 162 aaPredicted RBP11.88□□□□□ -0.51
CBWD1-204ENST00000377447 ME3Q16798 604 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 BLOC1S2Q6QNY1 142 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 SYNE4Q8N205 404 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 HAUS7Q99871 368 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 NUP188Q5SRE5 1749 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 TOGARAM1Q9Y4F4 1720 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 A0A1B0GUL7 405 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 EYA2O00167 538 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 EXOC5O00471 708 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 STX6O43752 255 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 GJB2P29033 226 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 TAF7LQ5H9L4 462 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 TM6SF1Q9BZW5 370 aa11.88□□□□□ -0.51
CBWD1-204ENST00000377447 MED23Q9ULK4 1368 aa11.87□□□□□ -0.51
CBWD1-204ENST00000377447 GORABQ5T7V8 394 aa11.87□□□□□ -0.51
CBWD1-204ENST00000377447 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
CBWD1-204ENST00000377447 TMEM63CQ9P1W3 806 aa11.87□□□□□ -0.51
CBWD1-204ENST00000377447 TPCN1Q9ULQ1 816 aa11.87□□□□□ -0.51
CBWD1-204ENST00000377447 SPATA31A1Q5TZJ5 1347 aa11.87□□□□□ -0.51
CBWD1-204ENST00000377447 RPAP1Q9BWH6 1393 aaPredicted RBP11.87□□□□□ -0.51
CBWD1-204ENST00000377447 TNS2Q63HR2 1409 aa11.87□□□□□ -0.51
CBWD1-204ENST00000377447 NASPP49321 788 aaPredicted RBP11.87□□□□□ -0.51
CBWD1-204ENST00000377447 FKBP4Q02790 459 aaKnown RBP eCLIP11.87□□□□□ -0.51
CBWD1-204ENST00000377447 STK3Q13188 491 aa11.87□□□□□ -0.51
CBWD1-204ENST00000377447 HLFQ16534 295 aa11.87□□□□□ -0.51
CBWD1-204ENST00000377447 TEX13AQ9BXU3 409 aaPredicted RBP11.87□□□□□ -0.51
CBWD1-204ENST00000377447 SYCE3A1L190 88 aa11.86□□□□□ -0.51
CBWD1-204ENST00000377447 VPS37CA5D8V6 355 aaPredicted RBP11.86□□□□□ -0.51
CBWD1-204ENST00000377447 ZSCAN22P10073 491 aaPredicted RBP11.86□□□□□ -0.51
CBWD1-204ENST00000377447 FAM98CQ17RN3 349 aaKnown RBP11.86□□□□□ -0.51
CBWD1-204ENST00000377447 MCMDC2Q4G0Z9 681 aa11.86□□□□□ -0.51
CBWD1-204ENST00000377447 KBTBD3Q8NAB2 608 aa11.86□□□□□ -0.51
CBWD1-204ENST00000377447 KCNB2Q92953 911 aa11.86□□□□□ -0.51
CBWD1-204ENST00000377447 ISCA1Q9BUE6 129 aa11.86□□□□□ -0.51
CBWD1-204ENST00000377447 CEP126Q9P2H0 1117 aa11.86□□□□□ -0.51
CBWD1-204ENST00000377447 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
CBWD1-204ENST00000377447 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
CBWD1-204ENST00000377447 ZNF609O15014 1411 aa11.86□□□□□ -0.51
CBWD1-204ENST00000377447 PAPPAQ13219 1627 aa11.86□□□□□ -0.51
CBWD1-204ENST00000377447 TJP1Q07157 1748 aa11.86□□□□□ -0.51
CBWD1-204ENST00000377447 ITGB4P16144 1822 aa11.86□□□□□ -0.51
CBWD1-204ENST00000377447 IFIT1P09914 478 aaKnown RBP11.86□□□□□ -0.51
CBWD1-204ENST00000377447 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
CBWD1-204ENST00000377447 ZSCAN31Q96LW9 406 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms