RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 SIL1Q9H173 461 aa16.42■□□□□ 0.22
SF1-205ENST00000377394 BOLA2Q9H3K6 86 aa16.42■□□□□ 0.22
SF1-205ENST00000377394 OGFRQ9NZT2 677 aa16.42■□□□□ 0.22
SF1-205ENST00000377394 MED23Q9ULK4 1368 aa16.42■□□□□ 0.22
SF1-205ENST00000377394 MRC1P22897 1456 aa16.42■□□□□ 0.22
SF1-205ENST00000377394 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
SF1-205ENST00000377394 KLHDC4Q8TBB5 520 aa16.42■□□□□ 0.22
SF1-205ENST00000377394 NEURL1BA8MQ27 555 aa16.41■□□□□ 0.22
SF1-205ENST00000377394 KDM4AO75164 1064 aa16.41■□□□□ 0.22
SF1-205ENST00000377394 KCNJ4P48050 445 aa16.41■□□□□ 0.22
SF1-205ENST00000377394 EPHA10Q5JZY3 1008 aa16.41■□□□□ 0.22
SF1-205ENST00000377394 LMOD2Q6P5Q4 547 aa16.41■□□□□ 0.22
SF1-205ENST00000377394 ZNF790Q6PG37 636 aa16.41■□□□□ 0.22
SF1-205ENST00000377394 LARP1Q6PKG0 1096 aaKnown RBP16.41■□□□□ 0.22
SF1-205ENST00000377394 TAF6LQ9Y6J9 622 aa16.41■□□□□ 0.22
SF1-205ENST00000377394 PSMA5P28066 241 aa16.41■□□□□ 0.22
SF1-205ENST00000377394 SLC39A6Q13433 755 aa16.41■□□□□ 0.22
SF1-205ENST00000377394 TAF3Q5VWG9 929 aa16.41■□□□□ 0.22
SF1-205ENST00000377394 RIC3Q7Z5B4 369 aa16.41■□□□□ 0.22
SF1-205ENST00000377394 IPO4Q8TEX9 1081 aaKnown RBP16.41■□□□□ 0.22
SF1-205ENST00000377394 FEZ1Q99689 392 aa16.41■□□□□ 0.22
SF1-205ENST00000377394 JCADQ9P266 1359 aa16.41■□□□□ 0.22
SF1-205ENST00000377394 VPS37CA5D8V6 355 aaPredicted RBP16.4■□□□□ 0.22
SF1-205ENST00000377394 SLFN14P0C7P3 912 aa16.4■□□□□ 0.22
SF1-205ENST00000377394 IRX5P78411 483 aaPredicted RBP16.4■□□□□ 0.22
SF1-205ENST00000377394 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
SF1-205ENST00000377394 FSD1Q9BTV5 496 aa16.4■□□□□ 0.22
SF1-205ENST00000377394 TRPM3Q9HCF6 1732 aaPredicted RBP16.4■□□□□ 0.22
SF1-205ENST00000377394 GCKRQ14397 625 aa16.4■□□□□ 0.22
SF1-205ENST00000377394 ALDH8A1Q9H2A2 487 aaPredicted RBP16.4■□□□□ 0.22
SF1-205ENST00000377394 CTNNA3Q9UI47 895 aa16.4■□□□□ 0.22
SF1-205ENST00000377394 C5P01031 1676 aa16.4■□□□□ 0.22
SF1-205ENST00000377394 ZNF142P52746 1687 aaPredicted RBP16.4■□□□□ 0.22
SF1-205ENST00000377394 KDM6AO15550 1401 aaPredicted RBP16.4■□□□□ 0.22
SF1-205ENST00000377394 ERBB3P21860 1342 aa16.4■□□□□ 0.22
SF1-205ENST00000377394 PDIA4P13667 645 aaKnown RBP16.39■□□□□ 0.21
SF1-205ENST00000377394 LARP1BQ659C4 914 aaKnown RBP16.39■□□□□ 0.21
SF1-205ENST00000377394 ZNF589Q86UQ0 364 aaPredicted RBP16.39■□□□□ 0.21
SF1-205ENST00000377394 XAGE3Q8WTP9 111 aa16.39■□□□□ 0.21
SF1-205ENST00000377394 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
SF1-205ENST00000377394 MYL6BP14649 208 aa16.39■□□□□ 0.21
SF1-205ENST00000377394 RPS6KB1P23443 525 aa16.39■□□□□ 0.21
SF1-205ENST00000377394 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.21
SF1-205ENST00000377394 TOB2Q14106 344 aaPredicted RBP16.38■□□□□ 0.21
SF1-205ENST00000377394 BLOC1S2Q6QNY1 142 aa16.38■□□□□ 0.21
SF1-205ENST00000377394 CDC37L1Q7L3B6 337 aa16.38■□□□□ 0.21
SF1-205ENST00000377394 NEXNQ0ZGT2 675 aa16.38■□□□□ 0.21
SF1-205ENST00000377394 TSGA10IPQ3SY00 556 aa16.38■□□□□ 0.21
SF1-205ENST00000377394 RNF20Q5VTR2 975 aa16.38■□□□□ 0.21
SF1-205ENST00000377394 COPS6Q7L5N1 327 aa16.38■□□□□ 0.21
SF1-205ENST00000377394 KRT28Q7Z3Y7 464 aa16.38■□□□□ 0.21
SF1-205ENST00000377394 LRP10Q7Z4F1 713 aa16.38■□□□□ 0.21
SF1-205ENST00000377394 TCEANC2Q96MN5 208 aa16.38■□□□□ 0.21
SF1-205ENST00000377394 MYD88Q99836 296 aa16.38■□□□□ 0.21
SF1-205ENST00000377394 RGPD5Q99666 1765 aa16.38■□□□□ 0.21
SF1-205ENST00000377394 NPHP3Q7Z494 1330 aa16.37■□□□□ 0.21
SF1-205ENST00000377394 CDK11BP21127 795 aaKnown RBP16.37■□□□□ 0.21
SF1-205ENST00000377394 TTC6Q86TZ1 520 aa16.37■□□□□ 0.21
SF1-205ENST00000377394 TAF5LO75529 589 aa16.37■□□□□ 0.21
SF1-205ENST00000377394 RFX5P48382 616 aaPredicted RBP16.37■□□□□ 0.21
SF1-205ENST00000377394 ANKRD1Q15327 319 aa16.37■□□□□ 0.21
SF1-205ENST00000377394 EDC3Q96F86 508 aaKnown RBP16.37■□□□□ 0.21
SF1-205ENST00000377394 COPRSQ9NQ92 184 aa16.37■□□□□ 0.21
SF1-205ENST00000377394 NFATC2IPQ8NCF5 419 aa16.36■□□□□ 0.21
SF1-205ENST00000377394 USPL1Q5W0Q7 1092 aa16.36■□□□□ 0.21
SF1-205ENST00000377394 HMG20BQ9P0W2 317 aa16.36■□□□□ 0.21
SF1-205ENST00000377394 COL15A1P39059 1388 aa16.36■□□□□ 0.21
SF1-205ENST00000377394 ELP1O95163 1332 aa16.36■□□□□ 0.21
SF1-205ENST00000377394 PHKG2P15735 406 aa16.36■□□□□ 0.21
SF1-205ENST00000377394 KRT85P78386 507 aa16.36■□□□□ 0.21
SF1-205ENST00000377394 FERMT3Q86UX7 667 aa16.36■□□□□ 0.21
SF1-205ENST00000377394 ZNF496Q96IT1 587 aaPredicted RBP16.36■□□□□ 0.21
SF1-205ENST00000377394 C16orf45Q96MC5 204 aaPredicted RBP16.36■□□□□ 0.21
SF1-205ENST00000377394 DBNLQ9UJU6 430 aaKnown RBP16.36■□□□□ 0.21
SF1-205ENST00000377394 DDX41Q9UJV9 622 aaKnown RBP16.36■□□□□ 0.21
SF1-205ENST00000377394 SCN11AQ9UI33 1791 aa16.35■□□□□ 0.21
SF1-205ENST00000377394 MST1RQ04912 1400 aa16.35■□□□□ 0.21
SF1-205ENST00000377394 ATP5JP18859 108 aa16.35■□□□□ 0.21
SF1-205ENST00000377394 PDCP20941 246 aa16.35■□□□□ 0.21
SF1-205ENST00000377394 PTGS1P23219 599 aa16.35■□□□□ 0.21
SF1-205ENST00000377394 GABPB1Q06547 395 aaPredicted RBP16.35■□□□□ 0.21
SF1-205ENST00000377394 FAM173BQ6P4H8 233 aa16.35■□□□□ 0.21
SF1-205ENST00000377394 ZC3H6P61129 1189 aaKnown RBP16.35■□□□□ 0.21
SF1-205ENST00000377394 PTPN12Q05209 780 aaKnown RBP16.35■□□□□ 0.21
SF1-205ENST00000377394 RAPGEF4Q8WZA2 1011 aa16.35■□□□□ 0.21
SF1-205ENST00000377394 ANKRD13DQ6ZTN6 518 aa16.34■□□□□ 0.21
SF1-205ENST00000377394 TNNI3KQ59H18 835 aa16.34■□□□□ 0.21
SF1-205ENST00000377394 FPGT-TNNI3KV9GXZ4 949 aa16.34■□□□□ 0.21
SF1-205ENST00000377394 ERICH4A6NGS2 130 aa16.33■□□□□ 0.21
SF1-205ENST00000377394 LIG1P18858 919 aa16.33■□□□□ 0.21
SF1-205ENST00000377394 TFCP2Q12800 502 aa16.33■□□□□ 0.21
SF1-205ENST00000377394 LRMPQ12912 555 aa16.33■□□□□ 0.21
SF1-205ENST00000377394 RABL6Q3YEC7 729 aaPredicted RBP16.33■□□□□ 0.21
SF1-205ENST00000377394 USP16Q9Y5T5 823 aa16.33■□□□□ 0.21
SF1-205ENST00000377394 TERF2Q15554 542 aa16.33■□□□□ 0.2
SF1-205ENST00000377394 NLRP2Q9NX02 1062 aa16.32■□□□□ 0.2
SF1-205ENST00000377394 MEGF6O75095 1541 aa16.32■□□□□ 0.2
SF1-205ENST00000377394 CCDC192P0DO97 292 aa16.32■□□□□ 0.2
SF1-205ENST00000377394 PIP4K2AP48426 406 aaPredicted RBP16.32■□□□□ 0.2
SF1-205ENST00000377394 C1orf167Q5SNV9 1468 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms