RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 C2CD5Q86YS7 1000 aa16.46■□□□□ 0.23
TIMP1-202ENST00000377017 CSF1RP07333 972 aa16.45■□□□□ 0.22
TIMP1-202ENST00000377017 NPR1P16066 1061 aa16.45■□□□□ 0.22
TIMP1-202ENST00000377017 LMBR1LQ6UX01 489 aa16.45■□□□□ 0.22
TIMP1-202ENST00000377017 DDX46Q7L014 1031 aaKnown RBP16.45■□□□□ 0.22
TIMP1-202ENST00000377017 TTLL11Q8NHH1 800 aa16.45■□□□□ 0.22
TIMP1-202ENST00000377017 EXOC6Q8TAG9 804 aa16.45■□□□□ 0.22
TIMP1-202ENST00000377017 MASTLQ96GX5 879 aa16.45■□□□□ 0.22
TIMP1-202ENST00000377017 RBM17Q96I25 401 aaKnown RBP16.45■□□□□ 0.22
TIMP1-202ENST00000377017 KAZALD1Q96I82 304 aa16.45■□□□□ 0.22
TIMP1-202ENST00000377017 C1orf115Q9H7X2 142 aa16.45■□□□□ 0.22
TIMP1-202ENST00000377017 RTL9Q8NET4 1388 aa16.45■□□□□ 0.22
TIMP1-202ENST00000377017 COL11A2P13942 1736 aaPredicted RBP16.45■□□□□ 0.22
TIMP1-202ENST00000377017 DLEC1Q9Y238 1755 aa16.44■□□□□ 0.22
TIMP1-202ENST00000377017 SRGNP10124 158 aa16.44■□□□□ 0.22
TIMP1-202ENST00000377017 CCDC57Q2TAC2 916 aa16.44■□□□□ 0.22
TIMP1-202ENST00000377017 EPHA10Q5JZY3 1008 aa16.44■□□□□ 0.22
TIMP1-202ENST00000377017 ANKRD44Q8N8A2 993 aa16.44■□□□□ 0.22
TIMP1-202ENST00000377017 ANKRD18BA2A2Z9 1011 aa16.43■□□□□ 0.22
TIMP1-202ENST00000377017 ALDH1B1P30837 517 aa16.43■□□□□ 0.22
TIMP1-202ENST00000377017 IFIT5Q13325 482 aaKnown RBP16.43■□□□□ 0.22
TIMP1-202ENST00000377017 MTX1Q13505 466 aa16.43■□□□□ 0.22
TIMP1-202ENST00000377017 STYK1Q6J9G0 422 aa16.43■□□□□ 0.22
TIMP1-202ENST00000377017 C3orf67Q6ZVT6 689 aa16.43■□□□□ 0.22
TIMP1-202ENST00000377017 RPAP2Q8IXW5 612 aaPredicted RBP16.43■□□□□ 0.22
TIMP1-202ENST00000377017 CCDC85AQ96PX6 553 aaPredicted RBP16.43■□□□□ 0.22
TIMP1-202ENST00000377017 CDC5LQ99459 802 aaKnown RBP16.43■□□□□ 0.22
TIMP1-202ENST00000377017 SRGAP3O43295 1099 aa16.42■□□□□ 0.22
TIMP1-202ENST00000377017 HMMRO75330 724 aa16.42■□□□□ 0.22
TIMP1-202ENST00000377017 ITGA6P23229 1130 aa16.42■□□□□ 0.22
TIMP1-202ENST00000377017 HOXA10P31260 410 aaPredicted RBP16.42■□□□□ 0.22
TIMP1-202ENST00000377017 FAM161AQ3B820 660 aa16.42■□□□□ 0.22
TIMP1-202ENST00000377017 TAF7LQ5H9L4 462 aa16.42■□□□□ 0.22
TIMP1-202ENST00000377017 CNKSR1Q969H4 720 aa16.42■□□□□ 0.22
TIMP1-202ENST00000377017 ZNF622Q969S3 477 aaKnown RBP eCLIP16.42■□□□□ 0.22
TIMP1-202ENST00000377017 CRAMP1Q96RY5 1269 aa16.42■□□□□ 0.22
TIMP1-202ENST00000377017 FHDC1Q9C0D6 1143 aaPredicted RBP16.42■□□□□ 0.22
TIMP1-202ENST00000377017 GREM2Q9H772 168 aa16.42■□□□□ 0.22
TIMP1-202ENST00000377017 CHRNA5P30532 468 aa16.41■□□□□ 0.22
TIMP1-202ENST00000377017 ATP8B2P98198 1209 aa16.41■□□□□ 0.22
TIMP1-202ENST00000377017 CEP85Q6P2H3 762 aa16.41■□□□□ 0.22
TIMP1-202ENST00000377017 KIAA1551Q9HCM1 1747 aa16.41■□□□□ 0.22
TIMP1-202ENST00000377017 DPEP1P16444 411 aa16.4■□□□□ 0.22
TIMP1-202ENST00000377017 IGHMBP2P38935 993 aaKnown RBP16.4■□□□□ 0.22
TIMP1-202ENST00000377017 GRAPQ13588 217 aa16.4■□□□□ 0.22
TIMP1-202ENST00000377017 ANKRD18AQ8IVF6 992 aa16.4■□□□□ 0.22
TIMP1-202ENST00000377017 GRAPLQ8TC17 118 aaPredicted RBP16.4■□□□□ 0.22
TIMP1-202ENST00000377017 CACNA1SQ13698 1873 aa16.39■□□□□ 0.22
TIMP1-202ENST00000377017 A0A0G2JLW4 131 aa16.39■□□□□ 0.21
TIMP1-202ENST00000377017 ERICH6BQ5W0A0 696 aa16.39■□□□□ 0.21
TIMP1-202ENST00000377017 TMC4Q7Z404 712 aa16.39■□□□□ 0.21
TIMP1-202ENST00000377017 MPHOSPH8Q99549 860 aa16.39■□□□□ 0.21
TIMP1-202ENST00000377017 SEC31BQ9NQW1 1179 aa16.39■□□□□ 0.21
TIMP1-202ENST00000377017 PIM2Q9P1W9 311 aa16.39■□□□□ 0.21
TIMP1-202ENST00000377017 BBOX1O75936 387 aa16.38■□□□□ 0.21
TIMP1-202ENST00000377017 TTLL6Q8N841 843 aa16.38■□□□□ 0.21
TIMP1-202ENST00000377017 SSH3Q8TE77 659 aa16.38■□□□□ 0.21
TIMP1-202ENST00000377017 SYT17Q9BSW7 474 aa16.38■□□□□ 0.21
TIMP1-202ENST00000377017 TMX4Q9H1E5 349 aaPredicted RBP16.38■□□□□ 0.21
TIMP1-202ENST00000377017 SPEF2Q9C093 1822 aa16.38■□□□□ 0.21
TIMP1-202ENST00000377017 BRCA1P38398 1863 aaKnown RBP16.37■□□□□ 0.21
TIMP1-202ENST00000377017 PNMA6EA0A0J9YXQ4 647 aa16.37■□□□□ 0.21
TIMP1-202ENST00000377017 RPS8P62241 208 aaKnown RBP16.37■□□□□ 0.21
TIMP1-202ENST00000377017 POLA2Q14181 598 aa16.37■□□□□ 0.21
TIMP1-202ENST00000377017 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
TIMP1-202ENST00000377017 TAF1P21675 1872 aa16.37■□□□□ 0.21
TIMP1-202ENST00000377017 PPEF1O14829 653 aaPredicted RBP16.36■□□□□ 0.21
TIMP1-202ENST00000377017 DALRD3Q5D0E6 543 aaKnown RBP16.36■□□□□ 0.21
TIMP1-202ENST00000377017 PRPF40BQ6NWY9 871 aaKnown RBP16.36■□□□□ 0.21
TIMP1-202ENST00000377017 NLGN2Q8NFZ4 835 aa16.36■□□□□ 0.21
TIMP1-202ENST00000377017 CELF1Q92879 486 aaKnown RBP16.36■□□□□ 0.21
TIMP1-202ENST00000377017 KCNA3P22001 575 aa16.35■□□□□ 0.21
TIMP1-202ENST00000377017 RFX5P48382 616 aaPredicted RBP16.35■□□□□ 0.21
TIMP1-202ENST00000377017 LDHAL6AQ6ZMR3 332 aa16.35■□□□□ 0.21
TIMP1-202ENST00000377017 COPRSQ9NQ92 184 aa16.35■□□□□ 0.21
TIMP1-202ENST00000377017 CNNM1Q9NRU3 951 aa16.35■□□□□ 0.21
TIMP1-202ENST00000377017 BSDC1Q9NW68 430 aaPredicted RBP16.35■□□□□ 0.21
TIMP1-202ENST00000377017 PCDHB15Q9Y5E8 787 aa16.35■□□□□ 0.21
TIMP1-202ENST00000377017 SLX4Q8IY92 1834 aa16.34■□□□□ 0.21
TIMP1-202ENST00000377017 PTPN12Q05209 780 aaKnown RBP16.34■□□□□ 0.21
TIMP1-202ENST00000377017 HSP90AB4PQ58FF6 505 aa16.34■□□□□ 0.21
TIMP1-202ENST00000377017 SOGA3Q5TF21 947 aa16.34■□□□□ 0.21
TIMP1-202ENST00000377017 ZNF594Q96JF6 807 aaPredicted RBP16.34■□□□□ 0.21
TIMP1-202ENST00000377017 RWDD1Q9H446 243 aaPredicted RBP16.34■□□□□ 0.21
TIMP1-202ENST00000377017 EYA2O00167 538 aa16.33■□□□□ 0.2
TIMP1-202ENST00000377017 CIAO1O76071 339 aa16.33■□□□□ 0.2
TIMP1-202ENST00000377017 G3BP1Q13283 466 aaKnown RBP eCLIP16.33■□□□□ 0.2
TIMP1-202ENST00000377017 OS9Q13438 667 aaPredicted RBP16.33■□□□□ 0.2
TIMP1-202ENST00000377017 HDAC1Q13547 482 aaPredicted RBP16.33■□□□□ 0.2
TIMP1-202ENST00000377017 CC2D2BQ6DHV5 1058 aa16.33■□□□□ 0.2
TIMP1-202ENST00000377017 SIRT2Q8IXJ6 389 aa16.33■□□□□ 0.2
TIMP1-202ENST00000377017 KLHDC4Q8TBB5 520 aa16.33■□□□□ 0.2
TIMP1-202ENST00000377017 LRRC37AA6NMS7 1700 aa16.32■□□□□ 0.2
TIMP1-202ENST00000377017 SURF6O75683 361 aaKnown RBP16.32■□□□□ 0.2
TIMP1-202ENST00000377017 IL15P40933 162 aaPredicted RBP16.32■□□□□ 0.2
TIMP1-202ENST00000377017 GRIPAP1Q4V328 841 aa16.32■□□□□ 0.2
TIMP1-202ENST00000377017 ERC1Q8IUD2 1116 aa16.32■□□□□ 0.2
TIMP1-202ENST00000377017 SP8Q8IXZ3 490 aa16.32■□□□□ 0.2
TIMP1-202ENST00000377017 SIL1Q9H173 461 aa16.32■□□□□ 0.2
TIMP1-202ENST00000377017 PA2G4Q9UQ80 394 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms