RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 ATG9AQ7Z3C6 839 aa22.59■■□□□ 1.21
PPP1R3F-202ENST00000376188 ISCA1Q9BUE6 129 aa22.59■■□□□ 1.21
PPP1R3F-202ENST00000376188 TICAM2Q86XR7 235 aa22.58■■□□□ 1.21
PPP1R3F-202ENST00000376188 PLCH1Q4KWH8 1693 aa22.58■■□□□ 1.21
PPP1R3F-202ENST00000376188 EDC3Q96F86 508 aaKnown RBP22.58■■□□□ 1.2
PPP1R3F-202ENST00000376188 BTG4Q9NY30 223 aa22.58■■□□□ 1.2
PPP1R3F-202ENST00000376188 TSGA10IPQ3SY00 556 aa22.57■■□□□ 1.2
PPP1R3F-202ENST00000376188 ZNF589Q86UQ0 364 aaPredicted RBP22.57■■□□□ 1.2
PPP1R3F-202ENST00000376188 CHAMP1Q96JM3 812 aa22.57■■□□□ 1.2
PPP1R3F-202ENST00000376188 SPEF2Q9C093 1822 aa22.57■■□□□ 1.2
PPP1R3F-202ENST00000376188 TAF5LO75529 589 aa22.57■■□□□ 1.2
PPP1R3F-202ENST00000376188 CIAO1O76071 339 aa22.57■■□□□ 1.2
PPP1R3F-202ENST00000376188 TCIRG1Q13488 830 aa22.57■■□□□ 1.2
PPP1R3F-202ENST00000376188 DNAJC2Q99543 621 aaKnown RBP22.57■■□□□ 1.2
PPP1R3F-202ENST00000376188 LRP6O75581 1613 aa22.57■■□□□ 1.2
PPP1R3F-202ENST00000376188 EYA2O00167 538 aa22.56■■□□□ 1.2
PPP1R3F-202ENST00000376188 TRIM28Q13263 835 aaKnown RBP22.56■■□□□ 1.2
PPP1R3F-202ENST00000376188 DISP2A7MBM2 1401 aa22.56■■□□□ 1.2
PPP1R3F-202ENST00000376188 STX6O43752 255 aa22.56■■□□□ 1.2
PPP1R3F-202ENST00000376188 ANKRD1Q15327 319 aa22.56■■□□□ 1.2
PPP1R3F-202ENST00000376188 USPL1Q5W0Q7 1092 aa22.56■■□□□ 1.2
PPP1R3F-202ENST00000376188 BLOC1S2Q6QNY1 142 aa22.56■■□□□ 1.2
PPP1R3F-202ENST00000376188 KIF6Q6ZMV9 814 aa22.56■■□□□ 1.2
PPP1R3F-202ENST00000376188 PIGBQ92521 554 aa22.56■■□□□ 1.2
PPP1R3F-202ENST00000376188 ZNF609O15014 1411 aa22.55■■□□□ 1.2
PPP1R3F-202ENST00000376188 LARGE1O95461 756 aa22.55■■□□□ 1.2
PPP1R3F-202ENST00000376188 ZSCAN22P10073 491 aaPredicted RBP22.55■■□□□ 1.2
PPP1R3F-202ENST00000376188 LARP6Q9BRS8 491 aaKnown RBP22.55■■□□□ 1.2
PPP1R3F-202ENST00000376188 ALDH8A1Q9H2A2 487 aaPredicted RBP22.55■■□□□ 1.2
PPP1R3F-202ENST00000376188 STARD3NLO95772 234 aa22.55■■□□□ 1.2
PPP1R3F-202ENST00000376188 KRT32Q14532 448 aa22.55■■□□□ 1.2
PPP1R3F-202ENST00000376188 CCDC83Q8IWF9 413 aa22.55■■□□□ 1.2
PPP1R3F-202ENST00000376188 KBTBD3Q8NAB2 608 aa22.55■■□□□ 1.2
PPP1R3F-202ENST00000376188 PALLDQ8WX93 1383 aa22.54■■□□□ 1.2
PPP1R3F-202ENST00000376188 SYT1P21579 422 aa22.54■■□□□ 1.2
PPP1R3F-202ENST00000376188 ASAP1Q9ULH1 1129 aa22.54■■□□□ 1.2
PPP1R3F-202ENST00000376188 ATP6V1DQ9Y5K8 247 aa22.54■■□□□ 1.2
PPP1R3F-202ENST00000376188 KAT6BQ8WYB5 2073 aa22.54■■□□□ 1.2
PPP1R3F-202ENST00000376188 NASPP49321 788 aaPredicted RBP22.53■■□□□ 1.2
PPP1R3F-202ENST00000376188 DNAJC10Q8IXB1 793 aa22.53■■□□□ 1.2
PPP1R3F-202ENST00000376188 NEUROD6Q96NK8 337 aa22.53■■□□□ 1.2
PPP1R3F-202ENST00000376188 FBXO3Q9UK99 471 aa22.53■■□□□ 1.2
PPP1R3F-202ENST00000376188 WNK3Q9BYP7 1800 aa22.53■■□□□ 1.2
PPP1R3F-202ENST00000376188 MCMDC2Q4G0Z9 681 aa22.53■■□□□ 1.2
PPP1R3F-202ENST00000376188 SH3TC1Q8TE82 1336 aa22.53■■□□□ 1.2
PPP1R3F-202ENST00000376188 COL22A1Q8NFW1 1626 aaPredicted RBP22.53■■□□□ 1.2
PPP1R3F-202ENST00000376188 PDIA4P13667 645 aaKnown RBP22.52■■□□□ 1.2
PPP1R3F-202ENST00000376188 RPS6KB1P23443 525 aa22.52■■□□□ 1.2
PPP1R3F-202ENST00000376188 TMEM87AQ8NBN3 555 aa22.52■■□□□ 1.2
PPP1R3F-202ENST00000376188 ME3Q16798 604 aa22.52■■□□□ 1.2
PPP1R3F-202ENST00000376188 DDX46Q7L014 1031 aaKnown RBP22.52■■□□□ 1.2
PPP1R3F-202ENST00000376188 TMEM63CQ9P1W3 806 aa22.52■■□□□ 1.2
PPP1R3F-202ENST00000376188 ZNF330Q9Y3S2 320 aaPredicted RBP22.52■■□□□ 1.2
PPP1R3F-202ENST00000376188 U3KPZ7 1027 aaPredicted RBP22.52■■□□□ 1.2
PPP1R3F-202ENST00000376188 ANKRD36CQ5JPF3 1778 aa22.52■■□□□ 1.2
PPP1R3F-202ENST00000376188 GJB2P29033 226 aa22.51■■□□□ 1.19
PPP1R3F-202ENST00000376188 ANP32BQ92688 251 aaKnown RBP22.51■■□□□ 1.19
PPP1R3F-202ENST00000376188 SYAP1Q96A49 352 aaPredicted RBP22.51■■□□□ 1.19
PPP1R3F-202ENST00000376188 PLA2G12BQ9BX93 195 aa22.51■■□□□ 1.19
PPP1R3F-202ENST00000376188 RBM27Q9P2N5 1060 aaKnown RBP22.51■■□□□ 1.19
PPP1R3F-202ENST00000376188 NDUFB9Q9Y6M9 179 aa22.51■■□□□ 1.19
PPP1R3F-202ENST00000376188 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.51■■□□□ 1.19
PPP1R3F-202ENST00000376188 PCCAP05165 728 aaPredicted RBP22.51■■□□□ 1.19
PPP1R3F-202ENST00000376188 CCDC57Q2TAC2 916 aa22.51■■□□□ 1.19
PPP1R3F-202ENST00000376188 PAG1Q9NWQ8 432 aa22.51■■□□□ 1.19
PPP1R3F-202ENST00000376188 BCL9O00512 1426 aa22.51■■□□□ 1.19
PPP1R3F-202ENST00000376188 ROBO1Q9Y6N7 1651 aa22.5■■□□□ 1.19
PPP1R3F-202ENST00000376188 F13A1P00488 732 aa22.5■■□□□ 1.19
PPP1R3F-202ENST00000376188 LRRC24Q50LG9 513 aa22.5■■□□□ 1.19
PPP1R3F-202ENST00000376188 TPCN1Q9ULQ1 816 aa22.5■■□□□ 1.19
PPP1R3F-202ENST00000376188 NSFL1CQ9UNZ2 370 aaKnown RBP22.5■■□□□ 1.19
PPP1R3F-202ENST00000376188 AHDC1Q5TGY3 1603 aaPredicted RBP22.5■■□□□ 1.19
PPP1R3F-202ENST00000376188 MAP3K15Q6ZN16 1313 aa22.49■■□□□ 1.19
PPP1R3F-202ENST00000376188 MYH3P11055 1940 aa22.49■■□□□ 1.19
PPP1R3F-202ENST00000376188 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.49■■□□□ 1.19
PPP1R3F-202ENST00000376188 ZNF594Q96JF6 807 aaPredicted RBP22.49■■□□□ 1.19
PPP1R3F-202ENST00000376188 COL16A1Q07092 1604 aaPredicted RBP22.49■■□□□ 1.19
PPP1R3F-202ENST00000376188 A0A1B0GUL7 405 aa22.49■■□□□ 1.19
PPP1R3F-202ENST00000376188 TIMM10P62072 90 aa22.49■■□□□ 1.19
PPP1R3F-202ENST00000376188 CCDC173Q0VFZ6 552 aa22.49■■□□□ 1.19
PPP1R3F-202ENST00000376188 ST3GAL1Q11201 340 aa22.49■■□□□ 1.19
PPP1R3F-202ENST00000376188 HELLSQ9NRZ9 838 aa22.49■■□□□ 1.19
PPP1R3F-202ENST00000376188 CEP126Q9P2H0 1117 aa22.49■■□□□ 1.19
PPP1R3F-202ENST00000376188 LRSAM1Q6UWE0 723 aa22.48■■□□□ 1.19
PPP1R3F-202ENST00000376188 ZBTB38Q8NAP3 1195 aaPredicted RBP22.48■■□□□ 1.19
PPP1R3F-202ENST00000376188 GOLIM4O00461 696 aa22.48■■□□□ 1.19
PPP1R3F-202ENST00000376188 HSP90AB3PQ58FF7 597 aa22.48■■□□□ 1.19
PPP1R3F-202ENST00000376188 GIGYF2Q6Y7W6 1299 aaKnown RBP22.48■■□□□ 1.19
PPP1R3F-202ENST00000376188 USP48Q86UV5 1035 aa22.48■■□□□ 1.19
PPP1R3F-202ENST00000376188 AKAP2Q9Y2D5 859 aa22.47■■□□□ 1.19
PPP1R3F-202ENST00000376188 PRIM1P49642 420 aaKnown RBP22.47■■□□□ 1.19
PPP1R3F-202ENST00000376188 FOXD4L6Q3SYB3 417 aaPredicted RBP22.47■■□□□ 1.19
PPP1R3F-202ENST00000376188 FOXD4L3Q6VB84 417 aaPredicted RBP22.47■■□□□ 1.19
PPP1R3F-202ENST00000376188 CDHR2Q9BYE9 1310 aa22.46■■□□□ 1.19
PPP1R3F-202ENST00000376188 IFIT1P09914 478 aaKnown RBP22.46■■□□□ 1.19
PPP1R3F-202ENST00000376188 NEK1Q96PY6 1258 aa22.46■■□□□ 1.19
PPP1R3F-202ENST00000376188 SEC62Q99442 399 aaKnown RBP22.46■■□□□ 1.19
PPP1R3F-202ENST00000376188 MTMR6Q9Y217 621 aa22.46■■□□□ 1.19
PPP1R3F-202ENST00000376188 CCDC9Q9Y3X0 531 aaKnown RBP22.46■■□□□ 1.19
PPP1R3F-202ENST00000376188 TAF6LQ9Y6J9 622 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms