RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 RIC3Q7Z5B4 369 aa21.33■■□□□ 1.01
CLIC1-208ENST00000375784 NUTM1Q86Y26 1132 aa21.33■■□□□ 1.01
CLIC1-208ENST00000375784 JDP2Q8WYK2 163 aa21.33■■□□□ 1.01
CLIC1-208ENST00000375784 PSMD1Q99460 953 aa21.33■■□□□ 1.01
CLIC1-208ENST00000375784 PHAXQ9H814 394 aaKnown RBP21.33■■□□□ 1.01
CLIC1-208ENST00000375784 RNF216Q9NWF9 866 aaPredicted RBP21.33■■□□□ 1.01
CLIC1-208ENST00000375784 NUP98P52948 1817 aa21.32■■□□□ 1
CLIC1-208ENST00000375784 DDX58O95786 925 aaKnown RBP21.32■■□□□ 1
CLIC1-208ENST00000375784 SNED1Q8TER0 1413 aa21.31■■□□□ 1
CLIC1-208ENST00000375784 NTSR2O95665 410 aa21.31■■□□□ 1
CLIC1-208ENST00000375784 EXOSC9Q06265 439 aaKnown RBP21.31■■□□□ 1
CLIC1-208ENST00000375784 NLRP10Q86W26 655 aa21.31■■□□□ 1
CLIC1-208ENST00000375784 MIER1Q8N108 512 aa21.31■■□□□ 1
CLIC1-208ENST00000375784 EIF6P56537 245 aaKnown RBP21.3■■□□□ 1
CLIC1-208ENST00000375784 CAPNS2Q96L46 248 aa21.3■■□□□ 1
CLIC1-208ENST00000375784 SPINK5Q9NQ38 1064 aaPredicted RBP21.3■■□□□ 1
CLIC1-208ENST00000375784 GJA3Q9Y6H8 435 aa21.3■■□□□ 1
CLIC1-208ENST00000375784 ZNF521Q96K83 1311 aa21.29■■□□□ 1
CLIC1-208ENST00000375784 SLC4A2P04920 1241 aa21.29■■□□□ 1
CLIC1-208ENST00000375784 LMOD1P29536 600 aaPredicted RBP21.29■■□□□ 1
CLIC1-208ENST00000375784 ECE1P42892 770 aa21.29■■□□□ 1
CLIC1-208ENST00000375784 FMR1Q06787 632 aaKnown RBP eCLIP21.29■■□□□ 13e-7■□□□□ 8.3
CLIC1-208ENST00000375784 CRY2Q49AN0 593 aa21.29■■□□□ 1
CLIC1-208ENST00000375784 CC2D2BQ6DHV5 1058 aa21.29■■□□□ 1
CLIC1-208ENST00000375784 BEGAINQ9BUH8 593 aa21.29■■□□□ 1
CLIC1-208ENST00000375784 TRMT112Q9UI30 125 aaKnown RBP21.29■■□□□ 1
CLIC1-208ENST00000375784 TCERG1O14776 1098 aaKnown RBP21.28■■□□□ 1
CLIC1-208ENST00000375784 VAMP4O75379 141 aa21.28■■□□□ 1
CLIC1-208ENST00000375784 PAXIP1Q6ZW49 1069 aaPredicted RBP21.28■■□□□ 1
CLIC1-208ENST00000375784 GPR101Q96P66 508 aaPredicted RBP21.28■■□□□ 1
CLIC1-208ENST00000375784 CCDC85CA6NKD9 419 aa21.27■■□□□ 1
CLIC1-208ENST00000375784 EPS15P42566 896 aa21.27■■□□□ 1
CLIC1-208ENST00000375784 RGS19P49795 217 aa21.27■■□□□ 1
CLIC1-208ENST00000375784 SCNN1DP51172 638 aa21.27■■□□□ 1
CLIC1-208ENST00000375784 MLLT1Q03111 559 aaPredicted RBP21.27■■□□□ 1
CLIC1-208ENST00000375784 TRIM28Q13263 835 aaKnown RBP21.27■■□□□ 1
CLIC1-208ENST00000375784 SLC10A5Q5PT55 438 aa21.27■■□□□ 1
CLIC1-208ENST00000375784 CYP4F22Q6NT55 531 aa21.27■■□□□ 1
CLIC1-208ENST00000375784 NLRP3Q96P20 1036 aa21.27■■□□□ 1
CLIC1-208ENST00000375784 ISCA1Q9BUE6 129 aa21.27■■□□□ 1
CLIC1-208ENST00000375784 THSD7BQ9C0I4 1608 aa21.26■□□□□ 0.99
CLIC1-208ENST00000375784 ABCC12Q96J65 1359 aa21.26■□□□□ 0.99
CLIC1-208ENST00000375784 COL4A5P29400 1685 aa21.26■□□□□ 0.99
CLIC1-208ENST00000375784 E9PSI1 815 aa21.26■□□□□ 0.99
CLIC1-208ENST00000375784 ATP5J2-PTCD1G3V325 749 aa21.26■□□□□ 0.99
CLIC1-208ENST00000375784 CST9Q5W186 159 aa21.26■□□□□ 0.99
CLIC1-208ENST00000375784 RPGRQ92834 1020 aaKnown RBP21.26■□□□□ 0.99
CLIC1-208ENST00000375784 SH3TC1Q8TE82 1336 aa21.26■□□□□ 0.99
CLIC1-208ENST00000375784 GRM1Q13255 1194 aa21.25■□□□□ 0.99
CLIC1-208ENST00000375784 LTBP1Q14766 1721 aa21.25■□□□□ 0.99
CLIC1-208ENST00000375784 RIC1Q4ADV7 1423 aa21.25■□□□□ 0.99
CLIC1-208ENST00000375784 KSR2Q6VAB6 950 aa21.25■□□□□ 0.99
CLIC1-208ENST00000375784 USP50Q70EL3 339 aaPredicted RBP21.25■□□□□ 0.99
CLIC1-208ENST00000375784 HOXA10P31260 410 aaPredicted RBP21.24■□□□□ 0.99
CLIC1-208ENST00000375784 GRIPAP1Q4V328 841 aa21.24■□□□□ 0.99
CLIC1-208ENST00000375784 LARGE2Q8N3Y3 721 aa21.24■□□□□ 0.99
CLIC1-208ENST00000375784 RBM17Q96I25 401 aaKnown RBP21.24■□□□□ 0.99
CLIC1-208ENST00000375784 METTL22Q9BUU2 404 aaPredicted RBP21.24■□□□□ 0.99
CLIC1-208ENST00000375784 TLL2Q9Y6L7 1015 aa21.24■□□□□ 0.99
CLIC1-208ENST00000375784 PI4KAP2A4QPH2 592 aa21.23■□□□□ 0.99
CLIC1-208ENST00000375784 TRAF5O00463 557 aa21.23■□□□□ 0.99
CLIC1-208ENST00000375784 PI4KAP1Q8N8J0 262 aa21.23■□□□□ 0.99
CLIC1-208ENST00000375784 MYD88Q99836 296 aa21.23■□□□□ 0.99
CLIC1-208ENST00000375784 MAP3K2Q9Y2U5 619 aa21.23■□□□□ 0.99
CLIC1-208ENST00000375784 MAP2K2P36507 400 aa21.22■□□□□ 0.99
CLIC1-208ENST00000375784 NEXNQ0ZGT2 675 aa21.22■□□□□ 0.99
CLIC1-208ENST00000375784 CCDC191Q8NCU4 936 aa21.22■□□□□ 0.99
CLIC1-208ENST00000375784 HCLS1P14317 486 aaPredicted RBP21.21■□□□□ 0.99
CLIC1-208ENST00000375784 HSP90B1P14625 803 aaKnown RBP21.21■□□□□ 0.99
CLIC1-208ENST00000375784 SLFN5Q08AF3 891 aa21.21■□□□□ 0.99
CLIC1-208ENST00000375784 FLIIQ13045 1269 aa21.21■□□□□ 0.99
CLIC1-208ENST00000375784 FAM89AQ96GI7 184 aa21.21■□□□□ 0.99
CLIC1-208ENST00000375784 CRAMP1Q96RY5 1269 aa21.21■□□□□ 0.99
CLIC1-208ENST00000375784 TSKSQ9UJT2 592 aa21.21■□□□□ 0.99
CLIC1-208ENST00000375784 AOC2O75106 756 aa21.2■□□□□ 0.98
CLIC1-208ENST00000375784 FKBP5Q13451 457 aaPredicted RBP21.2■□□□□ 0.98
CLIC1-208ENST00000375784 G2E3Q7L622 706 aa21.2■□□□□ 0.98
CLIC1-208ENST00000375784 NIM1KQ8IY84 436 aa21.2■□□□□ 0.98
CLIC1-208ENST00000375784 SLC51AQ86UW1 340 aa21.19■□□□□ 0.98
CLIC1-208ENST00000375784 ZBTB38Q8NAP3 1195 aaPredicted RBP21.19■□□□□ 0.98
CLIC1-208ENST00000375784 ZNF428Q96B54 188 aa21.19■□□□□ 0.98
CLIC1-208ENST00000375784 CWC25Q9NXE8 425 aaPredicted RBP21.19■□□□□ 0.98
CLIC1-208ENST00000375784 PPEF1O14829 653 aaPredicted RBP21.18■□□□□ 0.98
CLIC1-208ENST00000375784 C3orf67Q6ZVT6 689 aa21.18■□□□□ 0.98
CLIC1-208ENST00000375784 SAPCD2Q86UD0 394 aa21.18■□□□□ 0.98
CLIC1-208ENST00000375784 TMX4Q9H1E5 349 aaPredicted RBP21.18■□□□□ 0.98
CLIC1-208ENST00000375784 ADARB2Q9NS39 739 aaKnown RBP21.18■□□□□ 0.98
CLIC1-208ENST00000375784 GPRC5DQ9NZD1 345 aa21.18■□□□□ 0.98
CLIC1-208ENST00000375784 ANKRD36CQ5JPF3 1778 aa21.18■□□□□ 0.98
CLIC1-208ENST00000375784 CA12O43570 354 aa21.17■□□□□ 0.98
CLIC1-208ENST00000375784 RTL5Q5HYW3 569 aaPredicted RBP21.17■□□□□ 0.98
CLIC1-208ENST00000375784 IRS4O14654 1257 aaPredicted RBP21.16■□□□□ 0.98
CLIC1-208ENST00000375784 PPIP5K2O43314 1243 aa21.16■□□□□ 0.98
CLIC1-208ENST00000375784 CELF2O95319 508 aaKnown RBP21.16■□□□□ 0.98
CLIC1-208ENST00000375784 PCCAP05165 728 aaPredicted RBP21.16■□□□□ 0.98
CLIC1-208ENST00000375784 DDX46Q7L014 1031 aaKnown RBP21.16■□□□□ 0.98
CLIC1-208ENST00000375784 CDCA7LQ96GN5 454 aa21.16■□□□□ 0.98
CLIC1-208ENST00000375784 HHIPL1Q96JK4 782 aa21.16■□□□□ 0.98
CLIC1-208ENST00000375784 MCOLN1Q9GZU1 580 aa21.16■□□□□ 0.98
CLIC1-208ENST00000375784 BBOX1O75936 387 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms