RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 TTC6Q86TZ1 520 aa18.08■□□□□ 0.49
MSH5-203ENST00000375750 PXDNLA1KZ92 1463 aa18.08■□□□□ 0.49
MSH5-203ENST00000375750 MRC1P22897 1456 aa18.08■□□□□ 0.49
MSH5-203ENST00000375750 PARP4Q9UKK3 1724 aaKnown RBP18.08■□□□□ 0.48
MSH5-203ENST00000375750 CYP46A1Q9Y6A2 500 aa18.08■□□□□ 0.48
MSH5-203ENST00000375750 STK3Q13188 491 aa18.08■□□□□ 0.48
MSH5-203ENST00000375750 NKX1-1Q15270 411 aaPredicted RBP18.08■□□□□ 0.48
MSH5-203ENST00000375750 CCDC8Q9H0W5 538 aaPredicted RBP18.08■□□□□ 0.48
MSH5-203ENST00000375750 GLRX3O76003 335 aaKnown RBP18.07■□□□□ 0.48
MSH5-203ENST00000375750 KCNJ4P48050 445 aa18.07■□□□□ 0.48
MSH5-203ENST00000375750 LUZP1Q86V48 1076 aa18.07■□□□□ 0.48
MSH5-203ENST00000375750 BCL11BQ9C0K0 894 aaPredicted RBP18.07■□□□□ 0.48
MSH5-203ENST00000375750 ZSWIM6Q9HCJ5 1215 aa18.07■□□□□ 0.48
MSH5-203ENST00000375750 TLR7Q9NYK1 1049 aaKnown RBP18.07■□□□□ 0.48
MSH5-203ENST00000375750 RBM8AQ9Y5S9 174 aaKnown RBP18.07■□□□□ 0.48
MSH5-203ENST00000375750 AHDC1Q5TGY3 1603 aaPredicted RBP18.07■□□□□ 0.48
MSH5-203ENST00000375750 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.07■□□□□ 0.48
MSH5-203ENST00000375750 LETM1O95202 739 aaPredicted RBP18.07■□□□□ 0.48
MSH5-203ENST00000375750 AACSQ86V21 672 aa18.07■□□□□ 0.48
MSH5-203ENST00000375750 ERVV-2B6SEH9 535 aa18.06■□□□□ 0.48
MSH5-203ENST00000375750 CBX1P83916 185 aa18.06■□□□□ 0.48
MSH5-203ENST00000375750 VPS53Q5VIR6 699 aa18.06■□□□□ 0.48
MSH5-203ENST00000375750 LARP1BQ659C4 914 aaKnown RBP18.06■□□□□ 0.48
MSH5-203ENST00000375750 CLASRPQ8N2M8 674 aaKnown RBP18.06■□□□□ 0.48
MSH5-203ENST00000375750 C5P01031 1676 aa18.06■□□□□ 0.48
MSH5-203ENST00000375750 IFIT2P09913 472 aaKnown RBP18.06■□□□□ 0.48
MSH5-203ENST00000375750 NMIQ13287 307 aaPredicted RBP18.06■□□□□ 0.48
MSH5-203ENST00000375750 NECTIN1Q15223 517 aa18.06■□□□□ 0.48
MSH5-203ENST00000375750 KLHDC4Q8TBB5 520 aa18.06■□□□□ 0.48
MSH5-203ENST00000375750 NUTM2BA6NNL0 878 aaPredicted RBP18.05■□□□□ 0.48
MSH5-203ENST00000375750 NUTM2EB1AL46 878 aaPredicted RBP18.05■□□□□ 0.48
MSH5-203ENST00000375750 PTCD1O75127 700 aaKnown RBP18.05■□□□□ 0.48
MSH5-203ENST00000375750 PTGS1P23219 599 aa18.05■□□□□ 0.48
MSH5-203ENST00000375750 CREB3L3Q68CJ9 461 aa18.05■□□□□ 0.48
MSH5-203ENST00000375750 COPS6Q7L5N1 327 aa18.05■□□□□ 0.48
MSH5-203ENST00000375750 NUTM2AQ8IVF1 878 aaPredicted RBP18.05■□□□□ 0.48
MSH5-203ENST00000375750 XAGE3Q8WTP9 111 aa18.05■□□□□ 0.48
MSH5-203ENST00000375750 SIL1Q9H173 461 aa18.05■□□□□ 0.48
MSH5-203ENST00000375750 ECHDC1Q9NTX5 307 aa18.05■□□□□ 0.48
MSH5-203ENST00000375750 SPTLC3Q9NUV7 552 aa18.05■□□□□ 0.48
MSH5-203ENST00000375750 EPB41L2O43491 1005 aaKnown RBP18.05■□□□□ 0.48
MSH5-203ENST00000375750 KIAA1524Q8TCG1 905 aa18.05■□□□□ 0.48
MSH5-203ENST00000375750 EDC3Q96F86 508 aaKnown RBP18.05■□□□□ 0.48
MSH5-203ENST00000375750 C9orf78Q9NZ63 289 aaPredicted RBP18.05■□□□□ 0.48
MSH5-203ENST00000375750 ATP6V1DQ9Y5K8 247 aa18.05■□□□□ 0.48
MSH5-203ENST00000375750 CCDC94Q9BW85 323 aaPredicted RBP18.04■□□□□ 0.48
MSH5-203ENST00000375750 BCL2L12Q9HB09 334 aa18.04■□□□□ 0.48
MSH5-203ENST00000375750 NRBP1Q9UHY1 535 aa18.04■□□□□ 0.48
MSH5-203ENST00000375750 CCDC171Q6TFL3 1326 aa18.04■□□□□ 0.48
MSH5-203ENST00000375750 CHGBP05060 677 aa18.04■□□□□ 0.48
MSH5-203ENST00000375750 ATP2B3Q16720 1220 aa18.04■□□□□ 0.48
MSH5-203ENST00000375750 RIC3Q7Z5B4 369 aa18.04■□□□□ 0.48
MSH5-203ENST00000375750 BOLA2Q9H3K6 86 aa18.04■□□□□ 0.48
MSH5-203ENST00000375750 DDX58O95786 925 aaKnown RBP18.03■□□□□ 0.48
MSH5-203ENST00000375750 LRMPQ12912 555 aa18.03■□□□□ 0.48
MSH5-203ENST00000375750 PRIMPOLQ96LW4 560 aa18.03■□□□□ 0.48
MSH5-203ENST00000375750 A0A0D9SFI3 127 aa18.03■□□□□ 0.48
MSH5-203ENST00000375750 RIOK3O14730 519 aaKnown RBP18.03■□□□□ 0.48
MSH5-203ENST00000375750 TOM1O60784 492 aa18.03■□□□□ 0.48
MSH5-203ENST00000375750 EAF2Q96CJ1 260 aaPredicted RBP18.03■□□□□ 0.48
MSH5-203ENST00000375750 ZHX1Q9UKY1 873 aaPredicted RBP18.03■□□□□ 0.48
MSH5-203ENST00000375750 MRVI1Q9Y6F6 885 aa18.03■□□□□ 0.48
MSH5-203ENST00000375750 NDUFB9Q9Y6M9 179 aa18.03■□□□□ 0.48
MSH5-203ENST00000375750 TTC41PQ6P2S7 1318 aa18.03■□□□□ 0.48
MSH5-203ENST00000375750 SPDYE4A6NLX3 237 aa18.02■□□□□ 0.48
MSH5-203ENST00000375750 HMGN5P82970 282 aaKnown RBP18.02■□□□□ 0.48
MSH5-203ENST00000375750 PPP4R3BQ5MIZ7 849 aa18.02■□□□□ 0.48
MSH5-203ENST00000375750 LRP10Q7Z4F1 713 aa18.02■□□□□ 0.48
MSH5-203ENST00000375750 RUFY2Q8WXA3 655 aa18.02■□□□□ 0.48
MSH5-203ENST00000375750 KIF3AQ9Y496 699 aa18.02■□□□□ 0.48
MSH5-203ENST00000375750 SLC27A2O14975 620 aa18.02■□□□□ 0.48
MSH5-203ENST00000375750 DACT1Q9NYF0 836 aa18.02■□□□□ 0.48
MSH5-203ENST00000375750 SHANK3Q9BYB0 1731 aa18.02■□□□□ 0.47
MSH5-203ENST00000375750 SASH1O94885 1247 aa18.02■□□□□ 0.47
MSH5-203ENST00000375750 CCDC192P0DO97 292 aa18.02■□□□□ 0.47
MSH5-203ENST00000375750 DDX11Q96FC9 970 aa18.02■□□□□ 0.47
MSH5-203ENST00000375750 USP42Q9H9J4 1324 aaKnown RBP18.01■□□□□ 0.47
MSH5-203ENST00000375750 TYRO3Q06418 890 aa18.01■□□□□ 0.47
MSH5-203ENST00000375750 COL16A1Q07092 1604 aaPredicted RBP18.01■□□□□ 0.47
MSH5-203ENST00000375750 COL14A1Q05707 1796 aaKnown RBP18.01■□□□□ 0.47
MSH5-203ENST00000375750 MTERF4Q7Z6M4 381 aaKnown RBP18.01■□□□□ 0.47
MSH5-203ENST00000375750 SUCLG2Q96I99 432 aa18.01■□□□□ 0.47
MSH5-203ENST00000375750 N4BP2Q86UW6 1770 aaPredicted RBP18■□□□□ 0.47
MSH5-203ENST00000375750 ALDH1L1O75891 902 aa18■□□□□ 0.47
MSH5-203ENST00000375750 IGKV5-2P06315 115 aa18■□□□□ 0.47
MSH5-203ENST00000375750 ZKSCAN1P17029 563 aaPredicted RBP18■□□□□ 0.47
MSH5-203ENST00000375750 FOSBP53539 338 aa18■□□□□ 0.47
MSH5-203ENST00000375750 ANO6Q4KMQ2 910 aa18■□□□□ 0.47
MSH5-203ENST00000375750 HSP90AB4PQ58FF6 505 aa18■□□□□ 0.47
MSH5-203ENST00000375750 ZNF589Q86UQ0 364 aaPredicted RBP18■□□□□ 0.47
MSH5-203ENST00000375750 KAZALD1Q96I82 304 aa18■□□□□ 0.47
MSH5-203ENST00000375750 ZSCAN31Q96LW9 406 aaPredicted RBP18■□□□□ 0.47
MSH5-203ENST00000375750 NUP62CLQ9H1M0 184 aa18■□□□□ 0.47
MSH5-203ENST00000375750 SH2B1Q9NRF2 756 aaPredicted RBP18■□□□□ 0.47
MSH5-203ENST00000375750 TMOD3Q9NYL9 352 aa18■□□□□ 0.47
MSH5-203ENST00000375750 PHLPP1O60346 1717 aa18■□□□□ 0.47
MSH5-203ENST00000375750 ANKRD13DQ6ZTN6 518 aa18■□□□□ 0.47
MSH5-203ENST00000375750 LINS1Q8NG48 757 aa18■□□□□ 0.47
MSH5-203ENST00000375750 COL22A1Q8NFW1 1626 aaPredicted RBP18■□□□□ 0.47
MSH5-203ENST00000375750 JAK2O60674 1132 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms