RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 ZC3H15Q8WU90 426 aaKnown RBP15.88■□□□□ 0.13
LSM2-208ENST00000375661 ABCC4O15439 1325 aa15.88■□□□□ 0.13
LSM2-208ENST00000375661 LRRC37AA6NMS7 1700 aa15.88■□□□□ 0.13
LSM2-208ENST00000375661 TCERG1O14776 1098 aaKnown RBP15.87■□□□□ 0.13
LSM2-208ENST00000375661 TNIP1Q15025 636 aa15.87■□□□□ 0.13
LSM2-208ENST00000375661 PDIA6Q15084 440 aa15.87■□□□□ 0.13
LSM2-208ENST00000375661 SAPCD2Q86UD0 394 aa15.87■□□□□ 0.13
LSM2-208ENST00000375661 CCDC146Q8IYE0 955 aa15.87■□□□□ 0.13
LSM2-208ENST00000375661 KIAA2012Q0VF49 1180 aa15.86■□□□□ 0.13
LSM2-208ENST00000375661 CIAPIN1Q6FI81 312 aa15.86■□□□□ 0.13
LSM2-208ENST00000375661 DPP8Q6V1X1 898 aaPredicted RBP15.86■□□□□ 0.13
LSM2-208ENST00000375661 MPNDQ8N594 471 aa15.86■□□□□ 0.13
LSM2-208ENST00000375661 THUMPD2Q9BTF0 503 aaKnown RBP15.86■□□□□ 0.13
LSM2-208ENST00000375661 TSPYL4Q9UJ04 414 aa15.86■□□□□ 0.13
LSM2-208ENST00000375661 TAF1P21675 1872 aa15.85■□□□□ 0.13
LSM2-208ENST00000375661 CELF2O95319 508 aaKnown RBP15.85■□□□□ 0.13
LSM2-208ENST00000375661 RGS19P49795 217 aa15.85■□□□□ 0.13
LSM2-208ENST00000375661 BRPF1P55201 1214 aaPredicted RBP15.85■□□□□ 0.13
LSM2-208ENST00000375661 GRM1Q13255 1194 aa15.85■□□□□ 0.13
LSM2-208ENST00000375661 TMC4Q7Z404 712 aa15.85■□□□□ 0.13
LSM2-208ENST00000375661 SLC51AQ86UW1 340 aa15.85■□□□□ 0.13
LSM2-208ENST00000375661 RUNDC1Q96C34 613 aa15.85■□□□□ 0.13
LSM2-208ENST00000375661 GMPSP49915 693 aaPredicted RBP15.84■□□□□ 0.13
LSM2-208ENST00000375661 FAM161AQ3B820 660 aa15.84■□□□□ 0.13
LSM2-208ENST00000375661 DDX46Q7L014 1031 aaKnown RBP15.84■□□□□ 0.13
LSM2-208ENST00000375661 CDC37L1Q7L3B6 337 aa15.84■□□□□ 0.13
LSM2-208ENST00000375661 BCL2L13Q9BXK5 485 aa15.84■□□□□ 0.13
LSM2-208ENST00000375661 DDX60Q8IY21 1712 aaKnown RBP15.84■□□□□ 0.13
LSM2-208ENST00000375661 CASP8AP2Q9UKL3 1982 aa15.84■□□□□ 0.13
LSM2-208ENST00000375661 SLC34A2O95436 690 aa15.83■□□□□ 0.12
LSM2-208ENST00000375661 EIF2S2P20042 333 aaKnown RBP15.83■□□□□ 0.12
LSM2-208ENST00000375661 GRAPQ13588 217 aa15.83■□□□□ 0.12
LSM2-208ENST00000375661 NLRP10Q86W26 655 aa15.83■□□□□ 0.12
LSM2-208ENST00000375661 FAM9BQ8IZU0 186 aa15.83■□□□□ 0.12
LSM2-208ENST00000375661 GRAPLQ8TC17 118 aaPredicted RBP15.83■□□□□ 0.12
LSM2-208ENST00000375661 GLIS2Q9BZE0 524 aaPredicted RBP15.83■□□□□ 0.12
LSM2-208ENST00000375661 DUOX1Q9NRD9 1551 aa15.83■□□□□ 0.12
LSM2-208ENST00000375661 CCDC85CA6NKD9 419 aa15.82■□□□□ 0.12
LSM2-208ENST00000375661 AOC2O75106 756 aa15.82■□□□□ 0.12
LSM2-208ENST00000375661 MLLT1Q03111 559 aaPredicted RBP15.82■□□□□ 0.12
LSM2-208ENST00000375661 LMOD3Q0VAK6 560 aa15.82■□□□□ 0.12
LSM2-208ENST00000375661 TCIRG1Q13488 830 aa15.82■□□□□ 0.12
LSM2-208ENST00000375661 SH3TC1Q8TE82 1336 aa15.82■□□□□ 0.12
LSM2-208ENST00000375661 POLR2AP24928 1970 aaKnown RBP15.82■□□□□ 0.12
LSM2-208ENST00000375661 H7C1D1 291 aa15.81■□□□□ 0.12
LSM2-208ENST00000375661 TMPOP42166 694 aaKnown RBP15.81■□□□□ 0.12
LSM2-208ENST00000375661 PROSER3Q2NL68 480 aa15.81■□□□□ 0.12
LSM2-208ENST00000375661 COPS6Q7L5N1 327 aa15.81■□□□□ 0.12
LSM2-208ENST00000375661 CNOT7Q9UIV1 285 aaKnown RBP15.81■□□□□ 0.12
LSM2-208ENST00000375661 APAF1O14727 1248 aa15.8■□□□□ 0.12
LSM2-208ENST00000375661 RAD17O75943 681 aa15.8■□□□□ 0.12
LSM2-208ENST00000375661 HCLS1P14317 486 aaPredicted RBP15.8■□□□□ 0.12
LSM2-208ENST00000375661 HIRAP54198 1017 aaPredicted RBP15.8■□□□□ 0.12
LSM2-208ENST00000375661 RIPK4P57078 832 aa15.8■□□□□ 0.12
LSM2-208ENST00000375661 NOGQ13253 232 aa15.8■□□□□ 0.12
LSM2-208ENST00000375661 DPF2Q92785 391 aa15.8■□□□□ 0.12
LSM2-208ENST00000375661 TRMT112Q9UI30 125 aaKnown RBP15.8■□□□□ 0.12
LSM2-208ENST00000375661 ANXA1P04083 346 aa15.79■□□□□ 0.12
LSM2-208ENST00000375661 TRPM4Q8TD43 1214 aa15.79■□□□□ 0.12
LSM2-208ENST00000375661 XAGE3Q8WTP9 111 aa15.79■□□□□ 0.12
LSM2-208ENST00000375661 AKAP11Q9UKA4 1901 aa15.78■□□□□ 0.12
LSM2-208ENST00000375661 YDJCA8MPS7 323 aa15.78■□□□□ 0.12
LSM2-208ENST00000375661 AIMP1Q12904 312 aaKnown RBP15.78■□□□□ 0.12
LSM2-208ENST00000375661 ZNF408Q9H9D4 720 aa15.78■□□□□ 0.12
LSM2-208ENST00000375661 TSKSQ9UJT2 592 aa15.78■□□□□ 0.12
LSM2-208ENST00000375661 RPS12P25398 132 aaKnown RBP15.77■□□□□ 0.12
LSM2-208ENST00000375661 WASHC4Q2M389 1173 aa15.77■□□□□ 0.12
LSM2-208ENST00000375661 MICALL2Q8IY33 904 aa15.77■□□□□ 0.12
LSM2-208ENST00000375661 MCOLN1Q9GZU1 580 aa15.77■□□□□ 0.12
LSM2-208ENST00000375661 SF3B3Q15393 1217 aaKnown RBP15.76■□□□□ 0.11
LSM2-208ENST00000375661 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
LSM2-208ENST00000375661 PLBD2Q8NHP8 589 aa15.76■□□□□ 0.11
LSM2-208ENST00000375661 TRIM35Q9UPQ4 493 aa15.76■□□□□ 0.11
LSM2-208ENST00000375661 PSME4Q14997 1843 aa15.75■□□□□ 0.11
LSM2-208ENST00000375661 HOXB7P09629 217 aa15.75■□□□□ 0.11
LSM2-208ENST00000375661 HUNKP57058 714 aa15.75■□□□□ 0.11
LSM2-208ENST00000375661 USP48Q86UV5 1035 aa15.75■□□□□ 0.11
LSM2-208ENST00000375661 EYA3Q99504 573 aa15.75■□□□□ 0.11
LSM2-208ENST00000375661 SHTN1A0MZ66 631 aa15.74■□□□□ 0.11
LSM2-208ENST00000375661 PSMD14O00487 310 aa15.74■□□□□ 0.11
LSM2-208ENST00000375661 CHL1O00533 1208 aa15.74■□□□□ 0.11
LSM2-208ENST00000375661 DGKZQ13574 1117 aa15.74■□□□□ 0.11
LSM2-208ENST00000375661 RGMBQ6NW40 437 aa15.74■□□□□ 0.11
LSM2-208ENST00000375661 NECTIN2Q92692 538 aa15.74■□□□□ 0.11
LSM2-208ENST00000375661 CCDC102AQ96A19 550 aa15.74■□□□□ 0.11
LSM2-208ENST00000375661 ISCA1Q9BUE6 129 aa15.74■□□□□ 0.11
LSM2-208ENST00000375661 SAGE1Q9NXZ1 904 aa15.74■□□□□ 0.11
LSM2-208ENST00000375661 NSFL1CQ9UNZ2 370 aaKnown RBP15.74■□□□□ 0.11
LSM2-208ENST00000375661 ANKRD13DQ6ZTN6 518 aa15.73■□□□□ 0.11
LSM2-208ENST00000375661 SAMD7Q7Z3H4 446 aa15.73■□□□□ 0.11
LSM2-208ENST00000375661 KRT26Q7Z3Y9 468 aa15.73■□□□□ 0.11
LSM2-208ENST00000375661 C2orf69Q8N8R5 385 aa15.73■□□□□ 0.11
LSM2-208ENST00000375661 DCPSQ96C86 337 aaKnown RBP15.73■□□□□ 0.11
LSM2-208ENST00000375661 DBNDD1Q9H9R9 158 aa15.73■□□□□ 0.11
LSM2-208ENST00000375661 GBA2Q9HCG7 927 aaPredicted RBP15.73■□□□□ 0.11
LSM2-208ENST00000375661 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
LSM2-208ENST00000375661 SCN9AQ15858 1988 aa15.73■□□□□ 0.11
LSM2-208ENST00000375661 ZNF609O15014 1411 aa15.72■□□□□ 0.11
LSM2-208ENST00000375661 FAM155AB1AL88 458 aaPredicted RBP15.72■□□□□ 0.11
LSM2-208ENST00000375661 TRIM28Q13263 835 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms