RNA–Protein interactions for RNA: ENST00000374866.7

COL5A2-201, Transcript of collagen type V alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A2, Length 6,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-201ENST00000374866 SF3A3Q12874 501 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL5A2-201ENST00000374866 NFE2L2Q16236 605 aa12.84□□□□□ -0.35
COL5A2-201ENST00000374866 MARCKSP29966 332 aaPredicted RBP12.84□□□□□ -0.35
COL5A2-201ENST00000374866 TTF1Q15361 905 aaPredicted RBP12.84□□□□□ -0.35
COL5A2-201ENST00000374866 CCDC6Q16204 474 aa12.84□□□□□ -0.35
COL5A2-201ENST00000374866 KIAA0753Q2KHM9 967 aa12.84□□□□□ -0.35
COL5A2-201ENST00000374866 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
COL5A2-201ENST00000374866 SMARCC1Q92922 1105 aaPredicted RBP12.84□□□□□ -0.35
COL5A2-201ENST00000374866 STAC3Q96MF2 364 aa12.84□□□□□ -0.35
COL5A2-201ENST00000374866 FERMT1Q9BQL6 677 aa12.84□□□□□ -0.35
COL5A2-201ENST00000374866 STAT6P42226 847 aa12.84□□□□□ -0.35
COL5A2-201ENST00000374866 UBA7P41226 1012 aa12.84□□□□□ -0.35
COL5A2-201ENST00000374866 FAM83GA6ND36 823 aa12.84□□□□□ -0.35
COL5A2-201ENST00000374866 PDE4BQ07343 736 aa12.84□□□□□ -0.35
COL5A2-201ENST00000374866 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
COL5A2-201ENST00000374866 IFIT1BQ5T764 474 aaKnown RBP12.84□□□□□ -0.35
COL5A2-201ENST00000374866 IQCGQ9H095 443 aaKnown RBP12.84□□□□□ -0.35
COL5A2-201ENST00000374866 SAP30BPQ9UHR5 308 aaKnown RBP12.83□□□□□ -0.35
COL5A2-201ENST00000374866 HSF2BPO75031 334 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 ATP6V1AP38606 617 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 RFX1P22670 979 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 KRT9P35527 623 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 IARSP41252 1262 aaKnown RBP12.83□□□□□ -0.36
COL5A2-201ENST00000374866 UBE3BQ7Z3V4 1068 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 SLC4A4Q9Y6R1 1079 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 SORBS3O60504 671 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 GLRX3O76003 335 aaKnown RBP12.83□□□□□ -0.36
COL5A2-201ENST00000374866 RXRAP19793 462 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 FNBP4Q8N3X1 1017 aaPredicted RBP12.83□□□□□ -0.36
COL5A2-201ENST00000374866 ANKRD30BQ9BXX2 1392 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 CYP7A1P22680 504 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 GINS2Q9Y248 185 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 EMILIN1Q9Y6C2 1016 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 HMGXB3Q12766 1538 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 RPGRIP1LQ68CZ1 1315 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 AMPD3Q01432 767 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 GIMAP6Q6P9H5 292 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 MAEAQ7L5Y9 396 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 HAUS7Q99871 368 aa12.83□□□□□ -0.36
COL5A2-201ENST00000374866 PPP1R21Q6ZMI0 780 aa12.82□□□□□ -0.36
COL5A2-201ENST00000374866 ADCY5O95622 1261 aa12.82□□□□□ -0.36
COL5A2-201ENST00000374866 CCDC114Q96M63 670 aa12.82□□□□□ -0.36
COL5A2-201ENST00000374866 GBP3Q9H0R5 595 aa12.82□□□□□ -0.36
COL5A2-201ENST00000374866 SYNJ1O43426 1573 aa12.82□□□□□ -0.36
COL5A2-201ENST00000374866 TTC36A6NLP5 189 aa12.82□□□□□ -0.36
COL5A2-201ENST00000374866 PDE3AQ14432 1141 aa12.82□□□□□ -0.36
COL5A2-201ENST00000374866 BAG3O95817 575 aa12.82□□□□□ -0.36
COL5A2-201ENST00000374866 PHAXQ9H814 394 aaKnown RBP12.82□□□□□ -0.36
COL5A2-201ENST00000374866 PFDN4Q9NQP4 134 aa12.82□□□□□ -0.36
COL5A2-201ENST00000374866 CUX1P39880 1505 aa12.82□□□□□ -0.36
COL5A2-201ENST00000374866 CD109Q6YHK3 1445 aa12.82□□□□□ -0.36
COL5A2-201ENST00000374866 FAM13AO94988 1023 aa12.82□□□□□ -0.36
COL5A2-201ENST00000374866 GEN1Q17RS7 908 aa12.82□□□□□ -0.36
COL5A2-201ENST00000374866 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.82□□□□□ -0.36
COL5A2-201ENST00000374866 V9GYY5 206 aaPredicted RBP12.82□□□□□ -0.36
COL5A2-201ENST00000374866 HGSO14964 777 aaPredicted RBP12.81□□□□□ -0.36
COL5A2-201ENST00000374866 MPHOSPH6Q99547 160 aaKnown RBP12.81□□□□□ -0.36
COL5A2-201ENST00000374866 ZYXQ15942 572 aaKnown RBP12.81□□□□□ -0.36
COL5A2-201ENST00000374866 CEP112Q8N8E3 955 aa12.81□□□□□ -0.36
COL5A2-201ENST00000374866 MIGA1Q8NAN2 632 aa12.81□□□□□ -0.36
COL5A2-201ENST00000374866 ORC3Q9UBD5 711 aaPredicted RBP12.81□□□□□ -0.36
COL5A2-201ENST00000374866 SNW1Q13573 536 aaKnown RBP12.81□□□□□ -0.36
COL5A2-201ENST00000374866 NAA25Q14CX7 972 aa12.81□□□□□ -0.36
COL5A2-201ENST00000374866 SMARCC2Q8TAQ2 1214 aa12.81□□□□□ -0.36
COL5A2-201ENST00000374866 HYPKQ9NX55 129 aa12.81□□□□□ -0.36
COL5A2-201ENST00000374866 ESPNB1AK53 854 aa12.81□□□□□ -0.36
COL5A2-201ENST00000374866 KRT5P13647 590 aa12.81□□□□□ -0.36
COL5A2-201ENST00000374866 MAP7D1Q3KQU3 841 aa12.81□□□□□ -0.36
COL5A2-201ENST00000374866 NOP9Q86U38 636 aaKnown RBP12.81□□□□□ -0.36
COL5A2-201ENST00000374866 RNF41Q9H4P4 317 aaPredicted RBP12.81□□□□□ -0.36
COL5A2-201ENST00000374866 N4BP3O15049 544 aa12.81□□□□□ -0.36
COL5A2-201ENST00000374866 GNG11P61952 73 aa12.81□□□□□ -0.36
COL5A2-201ENST00000374866 GABPAQ06546 454 aa12.81□□□□□ -0.36
COL5A2-201ENST00000374866 NAA15Q9BXJ9 866 aaKnown RBP12.81□□□□□ -0.36
COL5A2-201ENST00000374866 KIF5BP33176 963 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 C6orf163Q5TEZ5 329 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 BACH2Q9BYV9 841 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 CWC25Q9NXE8 425 aaPredicted RBP12.8□□□□□ -0.36
COL5A2-201ENST00000374866 EIF6P56537 245 aaKnown RBP12.8□□□□□ -0.36
COL5A2-201ENST00000374866 WDR63Q8IWG1 891 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 DNAAF4Q8WXU2 420 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 SMC1BQ8NDV3 1235 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 RNF34Q969K3 372 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 ZKSCAN3Q9BRR0 538 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.8□□□□□ -0.36
COL5A2-201ENST00000374866 CHMP2AO43633 222 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 KIF4AO95239 1232 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 NAPAP54920 295 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 STXBP4Q6ZWJ1 553 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 PPANQ9NQ55 473 aaKnown RBP12.8□□□□□ -0.36
COL5A2-201ENST00000374866 TTC21AQ8NDW8 1320 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 SLC39A6Q13433 755 aa12.8□□□□□ -0.36
COL5A2-201ENST00000374866 HELBQ8NG08 1087 aaPredicted RBP12.8□□□□□ -0.36
COL5A2-201ENST00000374866 NAP1L3Q99457 506 aaPredicted RBP12.79□□□□□ -0.36
COL5A2-201ENST00000374866 MCM7P33993 719 aa12.79□□□□□ -0.36
COL5A2-201ENST00000374866 MICALCLQ6ZW33 695 aa12.79□□□□□ -0.36
COL5A2-201ENST00000374866 KCNK9Q9NPC2 374 aa12.79□□□□□ -0.36
COL5A2-201ENST00000374866 CRCPO75575 148 aa12.79□□□□□ -0.36
COL5A2-201ENST00000374866 ERCC3P19447 782 aa12.79□□□□□ -0.36
COL5A2-201ENST00000374866 RNASE9P60153 205 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms