RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 CCDC87Q9NVE4 849 aa15.28■□□□□ 0.04
PRPF4-202ENST00000374199 LOC102724428A0A0B4J2F2 783 aa15.28■□□□□ 0.04
PRPF4-202ENST00000374199 SIK1P57059 783 aa15.28■□□□□ 0.04
PRPF4-202ENST00000374199 OS9Q13438 667 aaPredicted RBP15.28■□□□□ 0.04
PRPF4-202ENST00000374199 SMARCC1Q92922 1105 aaPredicted RBP15.28■□□□□ 0.04
PRPF4-202ENST00000374199 MCM2P49736 904 aa15.27■□□□□ 0.04
PRPF4-202ENST00000374199 TSGA10IPQ3SY00 556 aa15.27■□□□□ 0.04
PRPF4-202ENST00000374199 USPL1Q5W0Q7 1092 aa15.27■□□□□ 0.04
PRPF4-202ENST00000374199 ZNF512BQ96KM6 892 aaPredicted RBP15.27■□□□□ 0.03
PRPF4-202ENST00000374199 NECTIN1Q15223 517 aa15.26■□□□□ 0.03
PRPF4-202ENST00000374199 JARID2Q92833 1246 aaPredicted RBP15.26■□□□□ 0.03
PRPF4-202ENST00000374199 UBR3Q6ZT12 1888 aa15.26■□□□□ 0.03
PRPF4-202ENST00000374199 UBAP1LF5GYI3 381 aa15.26■□□□□ 0.03
PRPF4-202ENST00000374199 CRKLP46109 303 aaKnown RBP15.26■□□□□ 0.03
PRPF4-202ENST00000374199 MAP4K1Q92918 833 aa15.26■□□□□ 0.03
PRPF4-202ENST00000374199 TM6SF1Q9BZW5 370 aa15.26■□□□□ 0.03
PRPF4-202ENST00000374199 TTLL11Q8NHH1 800 aa15.26■□□□□ 0.03
PRPF4-202ENST00000374199 ALDH8A1Q9H2A2 487 aaPredicted RBP15.26■□□□□ 0.03
PRPF4-202ENST00000374199 RIPOR2Q9Y4F9 1068 aa15.26■□□□□ 0.03
PRPF4-202ENST00000374199 SH3TC1Q8TE82 1336 aa15.26■□□□□ 0.03
PRPF4-202ENST00000374199 CCDC8Q9H0W5 538 aaPredicted RBP15.25■□□□□ 0.03
PRPF4-202ENST00000374199 SIL1Q9H173 461 aa15.25■□□□□ 0.03
PRPF4-202ENST00000374199 BRWD3Q6RI45 1802 aa15.25■□□□□ 0.03
PRPF4-202ENST00000374199 FRAT2O75474 233 aaPredicted RBP15.25■□□□□ 0.03
PRPF4-202ENST00000374199 RUFY2Q8WXA3 655 aa15.25■□□□□ 0.03
PRPF4-202ENST00000374199 SNX14Q9Y5W7 946 aa15.25■□□□□ 0.03
PRPF4-202ENST00000374199 ST18O60284 1047 aa15.24■□□□□ 0.03
PRPF4-202ENST00000374199 MCCP23508 829 aa15.24■□□□□ 0.03
PRPF4-202ENST00000374199 CTSWP56202 376 aa15.24■□□□□ 0.03
PRPF4-202ENST00000374199 CCDC171Q6TFL3 1326 aa15.24■□□□□ 0.03
PRPF4-202ENST00000374199 ZBTB22O15209 634 aa15.24■□□□□ 0.03
PRPF4-202ENST00000374199 PIP4K2BP78356 416 aa15.24■□□□□ 0.03
PRPF4-202ENST00000374199 LRRC24Q50LG9 513 aa15.24■□□□□ 0.03
PRPF4-202ENST00000374199 RC3H1Q5TC82 1133 aaKnown RBP15.24■□□□□ 0.03
PRPF4-202ENST00000374199 INTS4Q96HW7 963 aaKnown RBP15.24■□□□□ 0.03
PRPF4-202ENST00000374199 KIAA1551Q9HCM1 1747 aa15.24■□□□□ 0.03
PRPF4-202ENST00000374199 MAP4K4O95819 1239 aaPredicted RBP15.23■□□□□ 0.03
PRPF4-202ENST00000374199 NBR1Q14596 966 aa15.23■□□□□ 0.03
PRPF4-202ENST00000374199 DZIP3Q86Y13 1208 aaKnown RBP15.23■□□□□ 0.03
PRPF4-202ENST00000374199 DBNDD2Q9BQY9 259 aa15.23■□□□□ 0.03
PRPF4-202ENST00000374199 SLKQ9H2G2 1235 aaPredicted RBP15.23■□□□□ 0.03
PRPF4-202ENST00000374199 CWC22Q9HCG8 908 aaKnown RBP15.23■□□□□ 0.03
PRPF4-202ENST00000374199 CERKQ8TCT0 537 aa15.23■□□□□ 0.03
PRPF4-202ENST00000374199 ANO2Q9NQ90 1003 aa15.23■□□□□ 0.03
PRPF4-202ENST00000374199 CLEC4GQ6UXB4 293 aa15.22■□□□□ 0.03
PRPF4-202ENST00000374199 RGPD3A6NKT7 1758 aaPredicted RBP15.22■□□□□ 0.03
PRPF4-202ENST00000374199 RGPD4Q7Z3J3 1758 aa15.22■□□□□ 0.03
PRPF4-202ENST00000374199 PTH1RQ03431 593 aa15.22■□□□□ 0.03
PRPF4-202ENST00000374199 NTSR2O95665 410 aa15.22■□□□□ 0.03
PRPF4-202ENST00000374199 NMIQ13287 307 aaPredicted RBP15.22■□□□□ 0.03
PRPF4-202ENST00000374199 A0A0D9SFI3 127 aa15.21■□□□□ 0.03
PRPF4-202ENST00000374199 NUTM2BA6NNL0 878 aaPredicted RBP15.21■□□□□ 0.03
PRPF4-202ENST00000374199 NUTM2EB1AL46 878 aaPredicted RBP15.21■□□□□ 0.03
PRPF4-202ENST00000374199 PDE8AO60658 829 aa15.21■□□□□ 0.03
PRPF4-202ENST00000374199 PARP10Q53GL7 1025 aa15.21■□□□□ 0.03
PRPF4-202ENST00000374199 NUTM2AQ8IVF1 878 aaPredicted RBP15.21■□□□□ 0.03
PRPF4-202ENST00000374199 RASEFQ8IZ41 740 aa15.21■□□□□ 0.03
PRPF4-202ENST00000374199 FAM89AQ96GI7 184 aa15.21■□□□□ 0.03
PRPF4-202ENST00000374199 LINC00116Q8NCU8 138 aa15.21■□□□□ 0.03
PRPF4-202ENST00000374199 PUS3Q9BZE2 481 aaKnown RBP15.21■□□□□ 0.03
PRPF4-202ENST00000374199 ZSWIM6Q9HCJ5 1215 aa15.21■□□□□ 0.03
PRPF4-202ENST00000374199 MYO5AQ9Y4I1 1855 aaKnown RBP15.21■□□□□ 0.03
PRPF4-202ENST00000374199 KCNQ2O43526 872 aa15.21■□□□□ 0.02
PRPF4-202ENST00000374199 ATP6V1AP38606 617 aa15.21■□□□□ 0.02
PRPF4-202ENST00000374199 CWC27Q6UX04 472 aaKnown RBP15.21■□□□□ 0.02
PRPF4-202ENST00000374199 KBTBD3Q8NAB2 608 aa15.21■□□□□ 0.02
PRPF4-202ENST00000374199 FAM227BQ96M60 508 aa15.21■□□□□ 0.02
PRPF4-202ENST00000374199 FGFR2P21802 821 aa15.2■□□□□ 0.02
PRPF4-202ENST00000374199 DIAPH3Q9NSV4 1193 aa15.2■□□□□ 0.02
PRPF4-202ENST00000374199 MCM4P33991 863 aa15.2■□□□□ 0.02
PRPF4-202ENST00000374199 FAM98CQ17RN3 349 aaKnown RBP15.2■□□□□ 0.02
PRPF4-202ENST00000374199 TAF5LO75529 589 aa15.19■□□□□ 0.02
PRPF4-202ENST00000374199 ZNF594Q96JF6 807 aaPredicted RBP15.19■□□□□ 0.02
PRPF4-202ENST00000374199 BOLA2Q9H3K6 86 aa15.19■□□□□ 0.02
PRPF4-202ENST00000374199 TNRC6CQ9HCJ0 1690 aaKnown RBP15.19■□□□□ 0.02
PRPF4-202ENST00000374199 TMX3Q96JJ7 454 aa15.19■□□□□ 0.02
PRPF4-202ENST00000374199 TIAM2Q8IVF5 1701 aa15.19■□□□□ 0.02
PRPF4-202ENST00000374199 A0A1B0GUL7 405 aa15.19■□□□□ 0.02
PRPF4-202ENST00000374199 CCDC57Q2TAC2 916 aa15.19■□□□□ 0.02
PRPF4-202ENST00000374199 SYNE4Q8N205 404 aa15.19■□□□□ 0.02
PRPF4-202ENST00000374199 GREM2Q9H772 168 aa15.19■□□□□ 0.02
PRPF4-202ENST00000374199 AKAP2Q9Y2D5 859 aa15.19■□□□□ 0.02
PRPF4-202ENST00000374199 IRS4O14654 1257 aaPredicted RBP15.18■□□□□ 0.02
PRPF4-202ENST00000374199 SUSD4Q5VX71 490 aa15.18■□□□□ 0.02
PRPF4-202ENST00000374199 TNPO1Q92973 898 aaKnown RBP15.18■□□□□ 0.02
PRPF4-202ENST00000374199 ACSBG1Q96GR2 724 aa15.18■□□□□ 0.02
PRPF4-202ENST00000374199 C8orf37Q96NL8 207 aa15.18■□□□□ 0.02
PRPF4-202ENST00000374199 HELLSQ9NRZ9 838 aa15.18■□□□□ 0.02
PRPF4-202ENST00000374199 IFIT5Q13325 482 aaKnown RBP15.17■□□□□ 0.02
PRPF4-202ENST00000374199 ZNF589Q86UQ0 364 aaPredicted RBP15.17■□□□□ 0.02
PRPF4-202ENST00000374199 USP21Q9UK80 565 aa15.17■□□□□ 0.02
PRPF4-202ENST00000374199 NRXN2Q9P2S2 1712 aa15.17■□□□□ 0.02
PRPF4-202ENST00000374199 ITGA6P23229 1130 aa15.17■□□□□ 0.02
PRPF4-202ENST00000374199 ZMYM1Q5SVZ6 1142 aa15.17■□□□□ 0.02
PRPF4-202ENST00000374199 VPS53Q5VIR6 699 aa15.17■□□□□ 0.02
PRPF4-202ENST00000374199 HMG20BQ9P0W2 317 aa15.17■□□□□ 0.02
PRPF4-202ENST00000374199 ZDHHC9Q9Y397 364 aa15.17■□□□□ 0.02
PRPF4-202ENST00000374199 NEK4P51957 841 aa15.17■□□□□ 0.02
PRPF4-202ENST00000374199 SLC10A5Q5PT55 438 aa15.17■□□□□ 0.02
PRPF4-202ENST00000374199 NGLY1Q96IV0 654 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms