RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 ATF7IPQ6VMQ6 1270 aa20.18■□□□□ 0.82
HDHD3-202ENST00000374180 TTLL11Q8NHH1 800 aa20.18■□□□□ 0.82
HDHD3-202ENST00000374180 GRAPLQ8TC17 118 aaPredicted RBP20.18■□□□□ 0.82
HDHD3-202ENST00000374180 CCDC85AQ96PX6 553 aaPredicted RBP20.18■□□□□ 0.82
HDHD3-202ENST00000374180 PLA2G12BQ9BX93 195 aa20.18■□□□□ 0.82
HDHD3-202ENST00000374180 TMX4Q9H1E5 349 aaPredicted RBP20.18■□□□□ 0.82
HDHD3-202ENST00000374180 CCDC93Q567U6 631 aa20.17■□□□□ 0.82
HDHD3-202ENST00000374180 ZKSCAN2Q63HK3 967 aa20.17■□□□□ 0.82
HDHD3-202ENST00000374180 OLFM4Q6UX06 510 aa20.17■□□□□ 0.82
HDHD3-202ENST00000374180 TRIM27P14373 513 aa20.16■□□□□ 0.82
HDHD3-202ENST00000374180 CC2D2BQ6DHV5 1058 aa20.16■□□□□ 0.82
HDHD3-202ENST00000374180 SEC31BQ9NQW1 1179 aa20.16■□□□□ 0.82
HDHD3-202ENST00000374180 LAMB2P55268 1798 aa20.15■□□□□ 0.82
HDHD3-202ENST00000374180 NBPF7P0C2Y1 421 aaPredicted RBP20.15■□□□□ 0.82
HDHD3-202ENST00000374180 RASSF7Q02833 373 aa20.15■□□□□ 0.82
HDHD3-202ENST00000374180 RTKN2Q8IZC4 609 aa20.15■□□□□ 0.82
HDHD3-202ENST00000374180 CELF1Q92879 486 aaKnown RBP20.15■□□□□ 0.82
HDHD3-202ENST00000374180 RCAN3Q9UKA8 241 aa20.15■□□□□ 0.82
HDHD3-202ENST00000374180 ATP6V0A2Q9Y487 856 aa20.15■□□□□ 0.82
HDHD3-202ENST00000374180 CACNA1SQ13698 1873 aa20.14■□□□□ 0.82
HDHD3-202ENST00000374180 NFKBIEO00221 500 aa20.14■□□□□ 0.81
HDHD3-202ENST00000374180 YY1P25490 414 aa20.14■□□□□ 0.81
HDHD3-202ENST00000374180 RPS8P62241 208 aaKnown RBP20.14■□□□□ 0.81
HDHD3-202ENST00000374180 USP44Q9H0E7 712 aa20.14■□□□□ 0.81
HDHD3-202ENST00000374180 UTYO14607 1347 aa20.14■□□□□ 0.81
HDHD3-202ENST00000374180 CSF1RP07333 972 aa20.13■□□□□ 0.81
HDHD3-202ENST00000374180 FOXO4P98177 505 aa20.13■□□□□ 0.81
HDHD3-202ENST00000374180 GRIPAP1Q4V328 841 aa20.13■□□□□ 0.81
HDHD3-202ENST00000374180 TMC4Q7Z404 712 aa20.13■□□□□ 0.81
HDHD3-202ENST00000374180 SP8Q8IXZ3 490 aa20.13■□□□□ 0.81
HDHD3-202ENST00000374180 CLUAP1Q96AJ1 413 aa20.13■□□□□ 0.81
HDHD3-202ENST00000374180 TAOK3Q9H2K8 898 aa20.13■□□□□ 0.81
HDHD3-202ENST00000374180 GREM2Q9H772 168 aa20.13■□□□□ 0.81
HDHD3-202ENST00000374180 CHD4Q14839 1912 aa20.12■□□□□ 0.81
HDHD3-202ENST00000374180 INTS3Q68E01 1043 aaKnown RBP20.12■□□□□ 0.81
HDHD3-202ENST00000374180 TNNQ9UQP3 1299 aa20.12■□□□□ 0.81
HDHD3-202ENST00000374180 LMNB1P20700 586 aa20.11■□□□□ 0.81
HDHD3-202ENST00000374180 C9orf131Q5VYM1 1079 aa20.11■□□□□ 0.81
HDHD3-202ENST00000374180 CDC5LQ99459 802 aaKnown RBP20.11■□□□□ 0.81
HDHD3-202ENST00000374180 LTBP3Q9NS15 1303 aa20.11■□□□□ 0.81
HDHD3-202ENST00000374180 FKBP4Q02790 459 aaKnown RBP eCLIP20.11■□□□□ 0.81
HDHD3-202ENST00000374180 EPHA10Q5JZY3 1008 aa20.11■□□□□ 0.81
HDHD3-202ENST00000374180 LMBR1LQ6UX01 489 aa20.11■□□□□ 0.81
HDHD3-202ENST00000374180 SLC51AQ86UW1 340 aa20.11■□□□□ 0.81
HDHD3-202ENST00000374180 ANKRD18AQ8IVF6 992 aa20.11■□□□□ 0.81
HDHD3-202ENST00000374180 SUCLG2Q96I99 432 aa20.11■□□□□ 0.81
HDHD3-202ENST00000374180 RNF181Q9P0P0 153 aa20.11■□□□□ 0.81
HDHD3-202ENST00000374180 CHMP3Q9Y3E7 222 aa20.11■□□□□ 0.81
HDHD3-202ENST00000374180 RTL9Q8NET4 1388 aa20.1■□□□□ 0.81
HDHD3-202ENST00000374180 ITGA6P23229 1130 aa20.1■□□□□ 0.81
HDHD3-202ENST00000374180 FAM161AQ3B820 660 aa20.1■□□□□ 0.81
HDHD3-202ENST00000374180 FTSJ3Q8IY81 847 aaKnown RBP20.1■□□□□ 0.81
HDHD3-202ENST00000374180 TAF1P21675 1872 aa20.09■□□□□ 0.81
HDHD3-202ENST00000374180 KAZALD1Q96I82 304 aa20.09■□□□□ 0.81
HDHD3-202ENST00000374180 PSMD1Q99460 953 aa20.09■□□□□ 0.81
HDHD3-202ENST00000374180 UBTFL1P0CB47 393 aaPredicted RBP20.08■□□□□ 0.81
HDHD3-202ENST00000374180 PRELPP51888 382 aa20.08■□□□□ 0.81
HDHD3-202ENST00000374180 IFIT5Q13325 482 aaKnown RBP20.08■□□□□ 0.81
HDHD3-202ENST00000374180 DZIP1LQ8IYY4 767 aaKnown RBP20.08■□□□□ 0.81
HDHD3-202ENST00000374180 MPNDQ8N594 471 aa20.08■□□□□ 0.81
HDHD3-202ENST00000374180 BICC1Q9H694 974 aaKnown RBP20.08■□□□□ 0.81
HDHD3-202ENST00000374180 MYH3P11055 1940 aa20.08■□□□□ 0.8
HDHD3-202ENST00000374180 FER1L6Q2WGJ9 1857 aa20.07■□□□□ 0.8
HDHD3-202ENST00000374180 ANKRD18BA2A2Z9 1011 aa20.07■□□□□ 0.8
HDHD3-202ENST00000374180 IGHMBP2P38935 993 aaKnown RBP20.07■□□□□ 0.8
HDHD3-202ENST00000374180 CCDC57Q2TAC2 916 aa20.07■□□□□ 0.8
HDHD3-202ENST00000374180 DPP8Q6V1X1 898 aaPredicted RBP20.07■□□□□ 0.8
HDHD3-202ENST00000374180 TMEM57Q8N5G2 664 aa20.07■□□□□ 0.8
HDHD3-202ENST00000374180 ZNF277Q9NRM2 450 aaPredicted RBP20.07■□□□□ 0.8
HDHD3-202ENST00000374180 HDAC5Q9UQL6 1122 aa20.07■□□□□ 0.8
HDHD3-202ENST00000374180 BSDC1Q9NW68 430 aaPredicted RBP20.06■□□□□ 0.8
HDHD3-202ENST00000374180 NSFL1CQ9UNZ2 370 aaKnown RBP20.06■□□□□ 0.8
HDHD3-202ENST00000374180 MS4A1P11836 297 aa20.05■□□□□ 0.8
HDHD3-202ENST00000374180 MPHOSPH8Q99549 860 aa20.05■□□□□ 0.8
HDHD3-202ENST00000374180 MEIS3Q99687 375 aa20.05■□□□□ 0.8
HDHD3-202ENST00000374180 SNED1Q8TER0 1413 aa20.05■□□□□ 0.8
HDHD3-202ENST00000374180 GNAI3P08754 354 aa20.05■□□□□ 0.8
HDHD3-202ENST00000374180 RABL6Q3YEC7 729 aaPredicted RBP20.05■□□□□ 0.8
HDHD3-202ENST00000374180 SUPT20HQ8NEM7 779 aa20.05■□□□□ 0.8
HDHD3-202ENST00000374180 PLIN1O60240 522 aa20.04■□□□□ 0.8
HDHD3-202ENST00000374180 RLBP1P12271 317 aa20.04■□□□□ 0.8
HDHD3-202ENST00000374180 IARSP41252 1262 aaKnown RBP20.04■□□□□ 0.8
HDHD3-202ENST00000374180 GPSM2P81274 684 aa20.04■□□□□ 0.8
HDHD3-202ENST00000374180 TAF7LQ5H9L4 462 aa20.04■□□□□ 0.8
HDHD3-202ENST00000374180 ANKRD44Q8N8A2 993 aa20.04■□□□□ 0.8
HDHD3-202ENST00000374180 RTFDC1Q9BY42 306 aaPredicted RBP20.04■□□□□ 0.8
HDHD3-202ENST00000374180 ANKIB1Q9P2G1 1089 aa20.04■□□□□ 0.8
HDHD3-202ENST00000374180 COL4A1P02462 1669 aa20.04■□□□□ 0.8
HDHD3-202ENST00000374180 SBF1O95248 1867 aa20.03■□□□□ 0.8
HDHD3-202ENST00000374180 ITPRIPQ8IWB1 547 aa20.03■□□□□ 0.8
HDHD3-202ENST00000374180 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.03■□□□□ 0.8
HDHD3-202ENST00000374180 MINPP1Q9UNW1 487 aa20.03■□□□□ 0.8
HDHD3-202ENST00000374180 PANK1Q8TE04 598 aa20.02■□□□□ 0.8
HDHD3-202ENST00000374180 VPS33BQ9H267 617 aa20.02■□□□□ 0.8
HDHD3-202ENST00000374180 LRRFIP2Q9Y608 721 aaKnown RBP20.02■□□□□ 0.8
HDHD3-202ENST00000374180 C6orf229H3BNL8 230 aa20.01■□□□□ 0.79
HDHD3-202ENST00000374180 ZNF594Q96JF6 807 aaPredicted RBP20.01■□□□□ 0.79
HDHD3-202ENST00000374180 PODXL2Q9NZ53 605 aa20.01■□□□□ 0.79
HDHD3-202ENST00000374180 ZC3H4Q9UPT8 1303 aaKnown RBP20■□□□□ 0.79
HDHD3-202ENST00000374180 PPIP5K2O43314 1243 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms