RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 PARP3Q9Y6F1 533 aa18.23■□□□□ 0.51
SMPDL3B-201ENST00000373888 NPHP1O15259 732 aa18.22■□□□□ 0.51
SMPDL3B-201ENST00000373888 ST5P78524 1137 aa18.22■□□□□ 0.51
SMPDL3B-201ENST00000373888 CENPQQ7L2Z9 268 aaPredicted RBP18.22■□□□□ 0.51
SMPDL3B-201ENST00000373888 MTFR1LQ9H019 292 aa18.21■□□□□ 0.51
SMPDL3B-201ENST00000373888 DCTPP1Q9H773 170 aa18.21■□□□□ 0.51
SMPDL3B-201ENST00000373888 TSHZ2Q9NRE2 1034 aa18.21■□□□□ 0.51
SMPDL3B-201ENST00000373888 RTL9Q8NET4 1388 aa18.2■□□□□ 0.5
SMPDL3B-201ENST00000373888 TNRC6CQ9HCJ0 1690 aaKnown RBP18.2■□□□□ 0.5
SMPDL3B-201ENST00000373888 RFX5P48382 616 aaPredicted RBP18.2■□□□□ 0.5
SMPDL3B-201ENST00000373888 SF3B3Q15393 1217 aaKnown RBP18.2■□□□□ 0.5
SMPDL3B-201ENST00000373888 SMC5Q8IY18 1101 aa18.2■□□□□ 0.5
SMPDL3B-201ENST00000373888 CHMP3Q9Y3E7 222 aa18.2■□□□□ 0.5
SMPDL3B-201ENST00000373888 FAM161AQ3B820 660 aa18.19■□□□□ 0.5
SMPDL3B-201ENST00000373888 CCDC152Q4G0S7 254 aa18.19■□□□□ 0.5
SMPDL3B-201ENST00000373888 C3orf67Q6ZVT6 689 aa18.19■□□□□ 0.5
SMPDL3B-201ENST00000373888 CCDC24Q8N4L8 307 aa18.19■□□□□ 0.5
SMPDL3B-201ENST00000373888 GCC1Q96CN9 775 aa18.19■□□□□ 0.5
SMPDL3B-201ENST00000373888 NLRP3Q96P20 1036 aa18.19■□□□□ 0.5
SMPDL3B-201ENST00000373888 PSDA5PKW4 1024 aaPredicted RBP18.18■□□□□ 0.5
SMPDL3B-201ENST00000373888 ZBTB7AO95365 584 aa18.18■□□□□ 0.5
SMPDL3B-201ENST00000373888 GREM2Q9H772 168 aa18.18■□□□□ 0.5
SMPDL3B-201ENST00000373888 COPRSQ9NQ92 184 aa18.18■□□□□ 0.5
SMPDL3B-201ENST00000373888 NOP58Q9Y2X3 529 aaKnown RBP18.18■□□□□ 0.5
SMPDL3B-201ENST00000373888 PTPN12Q05209 780 aaKnown RBP18.18■□□□□ 0.5
SMPDL3B-201ENST00000373888 IFIT5Q13325 482 aaKnown RBP18.18■□□□□ 0.5
SMPDL3B-201ENST00000373888 CCDC57Q2TAC2 916 aa18.18■□□□□ 0.5
SMPDL3B-201ENST00000373888 CCDC85AQ96PX6 553 aaPredicted RBP18.18■□□□□ 0.5
SMPDL3B-201ENST00000373888 KLRG2A4D1S0 409 aaPredicted RBP18.17■□□□□ 0.5
SMPDL3B-201ENST00000373888 ITGA6P23229 1130 aa18.17■□□□□ 0.5
SMPDL3B-201ENST00000373888 BRIP1Q9BX63 1249 aa18.17■□□□□ 0.5
SMPDL3B-201ENST00000373888 ANKRD18BA2A2Z9 1011 aa18.16■□□□□ 0.5
SMPDL3B-201ENST00000373888 CRY2Q49AN0 593 aa18.16■□□□□ 0.5
SMPDL3B-201ENST00000373888 PA2G4Q9UQ80 394 aaKnown RBP18.16■□□□□ 0.5
SMPDL3B-201ENST00000373888 ANKRD31Q8N7Z5 1873 aa18.16■□□□□ 0.5
SMPDL3B-201ENST00000373888 LRP5O75197 1615 aa18.15■□□□□ 0.5
SMPDL3B-201ENST00000373888 SURF6O75683 361 aaKnown RBP18.15■□□□□ 0.5
SMPDL3B-201ENST00000373888 KLHDC4Q8TBB5 520 aa18.15■□□□□ 0.5
SMPDL3B-201ENST00000373888 EXOC6BQ9Y2D4 811 aa18.15■□□□□ 0.5
SMPDL3B-201ENST00000373888 HSP90AB4PQ58FF6 505 aa18.14■□□□□ 0.49
SMPDL3B-201ENST00000373888 FBXO3Q9UK99 471 aa18.14■□□□□ 0.49
SMPDL3B-201ENST00000373888 C10orf71Q711Q0 1435 aa18.14■□□□□ 0.49
SMPDL3B-201ENST00000373888 RAB11FIP3O75154 756 aa18.13■□□□□ 0.49
SMPDL3B-201ENST00000373888 POLD1P28340 1107 aa18.13■□□□□ 0.49
SMPDL3B-201ENST00000373888 SGIP1Q9BQI5 828 aa18.13■□□□□ 0.49
SMPDL3B-201ENST00000373888 SEC31BQ9NQW1 1179 aa18.13■□□□□ 0.49
SMPDL3B-201ENST00000373888 ATF5Q9Y2D1 282 aaPredicted RBP18.13■□□□□ 0.49
SMPDL3B-201ENST00000373888 PDE6BP35913 854 aa18.13■□□□□ 0.49
SMPDL3B-201ENST00000373888 ZNF594Q96JF6 807 aaPredicted RBP18.13■□□□□ 0.49
SMPDL3B-201ENST00000373888 CIAO1O76071 339 aa18.12■□□□□ 0.49
SMPDL3B-201ENST00000373888 G3BP1Q13283 466 aaKnown RBP eCLIP18.12■□□□□ 0.49
SMPDL3B-201ENST00000373888 TAF7LQ5H9L4 462 aa18.12■□□□□ 0.49
SMPDL3B-201ENST00000373888 CDC5LQ99459 802 aaKnown RBP18.12■□□□□ 0.49
SMPDL3B-201ENST00000373888 SIL1Q9H173 461 aa18.12■□□□□ 0.49
SMPDL3B-201ENST00000373888 EYA2O00167 538 aa18.11■□□□□ 0.49
SMPDL3B-201ENST00000373888 SOCS7O14512 581 aa18.11■□□□□ 0.49
SMPDL3B-201ENST00000373888 HOXA10P31260 410 aaPredicted RBP18.11■□□□□ 0.49
SMPDL3B-201ENST00000373888 NUCB1Q02818 461 aa18.11■□□□□ 0.49
SMPDL3B-201ENST00000373888 DDX46Q7L014 1031 aaKnown RBP18.11■□□□□ 0.49
SMPDL3B-201ENST00000373888 ERC1Q8IUD2 1116 aa18.11■□□□□ 0.49
SMPDL3B-201ENST00000373888 COL4A1P02462 1669 aa18.11■□□□□ 0.49
SMPDL3B-201ENST00000373888 PTGER2P43116 358 aa18.1■□□□□ 0.49
SMPDL3B-201ENST00000373888 OS9Q13438 667 aaPredicted RBP18.1■□□□□ 0.49
SMPDL3B-201ENST00000373888 ATG9AQ7Z3C6 839 aa18.1■□□□□ 0.49
SMPDL3B-201ENST00000373888 RPGRQ92834 1020 aaKnown RBP18.1■□□□□ 0.49
SMPDL3B-201ENST00000373888 KIF1BPQ96EK5 621 aa18.1■□□□□ 0.49
SMPDL3B-201ENST00000373888 PDZRN3Q9UPQ7 1066 aa18.1■□□□□ 0.49
SMPDL3B-201ENST00000373888 SRGNP10124 158 aa18.09■□□□□ 0.49
SMPDL3B-201ENST00000373888 IGHMBP2P38935 993 aaKnown RBP18.09■□□□□ 0.49
SMPDL3B-201ENST00000373888 IL15P40933 162 aaPredicted RBP18.09■□□□□ 0.49
SMPDL3B-201ENST00000373888 ANKRD45Q5TZF3 282 aa18.09■□□□□ 0.49
SMPDL3B-201ENST00000373888 LDHAL6AQ6ZMR3 332 aa18.09■□□□□ 0.49
SMPDL3B-201ENST00000373888 RHPN1Q8TCX5 695 aa18.09■□□□□ 0.49
SMPDL3B-201ENST00000373888 RBM17Q96I25 401 aaKnown RBP18.09■□□□□ 0.49
SMPDL3B-201ENST00000373888 PUS3Q9BZE2 481 aaKnown RBP18.09■□□□□ 0.49
SMPDL3B-201ENST00000373888 LRRCC1Q9C099 1032 aa18.09■□□□□ 0.49
SMPDL3B-201ENST00000373888 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
SMPDL3B-201ENST00000373888 COL11A2P13942 1736 aaPredicted RBP18.09■□□□□ 0.49
SMPDL3B-201ENST00000373888 SASH1O94885 1247 aa18.08■□□□□ 0.49
SMPDL3B-201ENST00000373888 GRAPQ13588 217 aa18.08■□□□□ 0.49
SMPDL3B-201ENST00000373888 LRRC24Q50LG9 513 aa18.08■□□□□ 0.49
SMPDL3B-201ENST00000373888 CHD1LQ86WJ1 897 aa18.08■□□□□ 0.49
SMPDL3B-201ENST00000373888 ANKRD18AQ8IVF6 992 aa18.08■□□□□ 0.49
SMPDL3B-201ENST00000373888 GRAPLQ8TC17 118 aaPredicted RBP18.08■□□□□ 0.49
SMPDL3B-201ENST00000373888 CELF1Q92879 486 aaKnown RBP18.08■□□□□ 0.49
SMPDL3B-201ENST00000373888 CRAMP1Q96RY5 1269 aa18.08■□□□□ 0.49
SMPDL3B-201ENST00000373888 MPHOSPH8Q99549 860 aa18.08■□□□□ 0.49
SMPDL3B-201ENST00000373888 RIPOR2Q9Y4F9 1068 aa18.08■□□□□ 0.49
SMPDL3B-201ENST00000373888 APBB1O00213 710 aa18.08■□□□□ 0.48
SMPDL3B-201ENST00000373888 NPR1P16066 1061 aa18.08■□□□□ 0.48
SMPDL3B-201ENST00000373888 RPS8P62241 208 aaKnown RBP18.08■□□□□ 0.48
SMPDL3B-201ENST00000373888 BSDC1Q9NW68 430 aaPredicted RBP18.08■□□□□ 0.48
SMPDL3B-201ENST00000373888 MASTLQ96GX5 879 aa18.07■□□□□ 0.48
SMPDL3B-201ENST00000373888 SPON1Q9HCB6 807 aa18.07■□□□□ 0.48
SMPDL3B-201ENST00000373888 CNNM1Q9NRU3 951 aa18.07■□□□□ 0.48
SMPDL3B-201ENST00000373888 TAF1P21675 1872 aa18.06■□□□□ 0.48
SMPDL3B-201ENST00000373888 H0YIN7 160 aa18.06■□□□□ 0.48
SMPDL3B-201ENST00000373888 C2CD5Q86YS7 1000 aa18.06■□□□□ 0.48
SMPDL3B-201ENST00000373888 ZBTB47Q9UFB7 747 aaPredicted RBP18.06■□□□□ 0.48
SMPDL3B-201ENST00000373888 SPEF2Q9C093 1822 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms