RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 SOS1Q07889 1333 aaPredicted RBP18.86■□□□□ 0.61
PBX3-204ENST00000373489 NPHP3Q7Z494 1330 aa18.86■□□□□ 0.61
PBX3-204ENST00000373489 CLCN6P51797 869 aa18.86■□□□□ 0.61
PBX3-204ENST00000373489 ESCO1Q5FWF5 840 aa18.86■□□□□ 0.61
PBX3-204ENST00000373489 DDX11Q96FC9 970 aa18.86■□□□□ 0.61
PBX3-204ENST00000373489 EYA1Q99502 592 aa18.86■□□□□ 0.61
PBX3-204ENST00000373489 USP44Q9H0E7 712 aa18.86■□□□□ 0.61
PBX3-204ENST00000373489 ZSWIM6Q9HCJ5 1215 aa18.86■□□□□ 0.61
PBX3-204ENST00000373489 PHF8Q9UPP1 1060 aa18.86■□□□□ 0.61
PBX3-204ENST00000373489 FHOD1Q9Y613 1164 aa18.86■□□□□ 0.61
PBX3-204ENST00000373489 TUBGCP6Q96RT7 1819 aa18.86■□□□□ 0.61
PBX3-204ENST00000373489 BECN2A8MW95 431 aa18.85■□□□□ 0.61
PBX3-204ENST00000373489 RAB11FIP3O75154 756 aa18.85■□□□□ 0.61
PBX3-204ENST00000373489 AMPHP49418 695 aa18.85■□□□□ 0.61
PBX3-204ENST00000373489 IQCB1Q15051 598 aa18.85■□□□□ 0.61
PBX3-204ENST00000373489 SYT10Q6XYQ8 523 aa18.85■□□□□ 0.61
PBX3-204ENST00000373489 ERCC4Q92889 916 aaPredicted RBP18.85■□□□□ 0.61
PBX3-204ENST00000373489 KDRP35968 1356 aa18.84■□□□□ 0.61
PBX3-204ENST00000373489 AOX1Q06278 1338 aa18.84■□□□□ 0.61
PBX3-204ENST00000373489 RBM43Q6ZSC3 357 aaKnown RBP18.84■□□□□ 0.61
PBX3-204ENST00000373489 RAD51AP2Q09MP3 1159 aa18.84■□□□□ 0.61
PBX3-204ENST00000373489 ZBTB9Q96C00 473 aa18.84■□□□□ 0.61
PBX3-204ENST00000373489 PLA2G4AP47712 749 aa18.83■□□□□ 0.61
PBX3-204ENST00000373489 SLFNL1Q499Z3 407 aa18.83■□□□□ 0.61
PBX3-204ENST00000373489 ARHGAP29Q52LW3 1261 aa18.83■□□□□ 0.61
PBX3-204ENST00000373489 FEZ2Q9UHY8 353 aaPredicted RBP18.83■□□□□ 0.61
PBX3-204ENST00000373489 SRGAP3O43295 1099 aa18.83■□□□□ 0.6
PBX3-204ENST00000373489 PNMA6AP0CW24 399 aaPredicted RBP18.83■□□□□ 0.6
PBX3-204ENST00000373489 CDC25BP30305 580 aa18.83■□□□□ 0.6
PBX3-204ENST00000373489 SNW1Q13573 536 aaKnown RBP18.83■□□□□ 0.6
PBX3-204ENST00000373489 ZFP91Q96JP5 570 aaPredicted RBP18.83■□□□□ 0.6
PBX3-204ENST00000373489 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.83■□□□□ 0.6
PBX3-204ENST00000373489 IGSF1Q8N6C5 1336 aa18.83■□□□□ 0.6
PBX3-204ENST00000373489 NWD1Q149M9 1564 aa18.82■□□□□ 0.6
PBX3-204ENST00000373489 H2AFXP16104 143 aaPredicted RBP18.82■□□□□ 0.6
PBX3-204ENST00000373489 SLC20A2Q08357 652 aa18.82■□□□□ 0.6
PBX3-204ENST00000373489 NUTM2GQ5VZR2 741 aa18.82■□□□□ 0.6
PBX3-204ENST00000373489 NEMFO60524 1076 aa18.81■□□□□ 0.6
PBX3-204ENST00000373489 FOSBP53539 338 aa18.81■□□□□ 0.6
PBX3-204ENST00000373489 MRFAP1L1Q96HT8 127 aa18.81■□□□□ 0.6
PBX3-204ENST00000373489 HTATSF1O43719 755 aaKnown RBP18.81■□□□□ 0.6
PBX3-204ENST00000373489 ZKSCAN1P17029 563 aaPredicted RBP18.81■□□□□ 0.6
PBX3-204ENST00000373489 SSH3Q8TE77 659 aa18.81■□□□□ 0.6
PBX3-204ENST00000373489 PIK3C2AO00443 1686 aa18.81■□□□□ 0.6
PBX3-204ENST00000373489 PDCP20941 246 aa18.81■□□□□ 0.6
PBX3-204ENST00000373489 NLRP6P59044 892 aa18.81■□□□□ 0.6
PBX3-204ENST00000373489 OS9Q13438 667 aaPredicted RBP18.81■□□□□ 0.6
PBX3-204ENST00000373489 ZCCHC17Q9NP64 241 aaKnown RBP18.81■□□□□ 0.6
PBX3-204ENST00000373489 RBM8AQ9Y5S9 174 aaKnown RBP18.81■□□□□ 0.6
PBX3-204ENST00000373489 LMTK3Q96Q04 1460 aa18.8■□□□□ 0.6
PBX3-204ENST00000373489 ST5P78524 1137 aa18.8■□□□□ 0.6
PBX3-204ENST00000373489 PSME1Q06323 249 aa18.8■□□□□ 0.6
PBX3-204ENST00000373489 ABTB2Q8N961 1025 aa18.8■□□□□ 0.6
PBX3-204ENST00000373489 SEC31AO94979 1220 aaKnown RBP18.79■□□□□ 0.6
PBX3-204ENST00000373489 CREB3L3Q68CJ9 461 aa18.79■□□□□ 0.6
PBX3-204ENST00000373489 SARM1Q6SZW1 724 aa18.79■□□□□ 0.6
PBX3-204ENST00000373489 ORAI2Q96SN7 254 aa18.79■□□□□ 0.6
PBX3-204ENST00000373489 TAF6LQ9Y6J9 622 aa18.79■□□□□ 0.6
PBX3-204ENST00000373489 JAK2O60674 1132 aa18.79■□□□□ 0.6
PBX3-204ENST00000373489 E4F1Q66K89 784 aaPredicted RBP18.79■□□□□ 0.6
PBX3-204ENST00000373489 RUFY2Q8WXA3 655 aa18.79■□□□□ 0.6
PBX3-204ENST00000373489 C19orf44Q9H6X5 657 aa18.79■□□□□ 0.6
PBX3-204ENST00000373489 TNNT3P45378 269 aaPredicted RBP18.78■□□□□ 0.6
PBX3-204ENST00000373489 NECTIN1Q15223 517 aa18.78■□□□□ 0.6
PBX3-204ENST00000373489 FTOQ9C0B1 505 aaKnown RBP eCLIP18.78■□□□□ 0.6
PBX3-204ENST00000373489 AOPEPQ8N6M6 819 aa18.78■□□□□ 0.6
PBX3-204ENST00000373489 FAM227BQ96M60 508 aa18.78■□□□□ 0.6
PBX3-204ENST00000373489 TM6SF1Q9BZW5 370 aa18.78■□□□□ 0.6
PBX3-204ENST00000373489 EPC1Q9H2F5 836 aa18.78■□□□□ 0.6
PBX3-204ENST00000373489 CCDC30Q5VVM6 783 aa18.77■□□□□ 0.6
PBX3-204ENST00000373489 KRBA2Q6ZNG9 492 aa18.77■□□□□ 0.6
PBX3-204ENST00000373489 PHAXQ9H814 394 aaKnown RBP18.77■□□□□ 0.6
PBX3-204ENST00000373489 TMEM94Q12767 1356 aa18.77■□□□□ 0.6
PBX3-204ENST00000373489 RNF20Q5VTR2 975 aa18.77■□□□□ 0.6
PBX3-204ENST00000373489 HOMER1Q86YM7 354 aa18.77■□□□□ 0.6
PBX3-204ENST00000373489 DHX40Q8IX18 779 aaKnown RBP18.77■□□□□ 0.6
PBX3-204ENST00000373489 PPP1R13BQ96KQ4 1090 aa18.77■□□□□ 0.6
PBX3-204ENST00000373489 IFIT2P09913 472 aaKnown RBP18.76■□□□□ 0.59
PBX3-204ENST00000373489 NBPF7P0C2Y1 421 aaPredicted RBP18.76■□□□□ 0.59
PBX3-204ENST00000373489 STX1AQ16623 288 aa18.76■□□□□ 0.59
PBX3-204ENST00000373489 TMCO3Q6UWJ1 677 aa18.76■□□□□ 0.59
PBX3-204ENST00000373489 TMX1Q9H3N1 280 aa18.76■□□□□ 0.59
PBX3-204ENST00000373489 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.76■□□□□ 0.59
PBX3-204ENST00000373489 HOXC9P31274 260 aa18.76■□□□□ 0.59
PBX3-204ENST00000373489 TEX35Q5T0J7 233 aa18.76■□□□□ 0.59
PBX3-204ENST00000373489 SMARCE1Q969G3 411 aa18.76■□□□□ 0.59
PBX3-204ENST00000373489 ATF3P18847 181 aa18.76■□□□□ 0.59
PBX3-204ENST00000373489 BLOC1S2Q6QNY1 142 aa18.76■□□□□ 0.59
PBX3-204ENST00000373489 CCAR1Q8IX12 1150 aaKnown RBP18.76■□□□□ 0.59
PBX3-204ENST00000373489 L2HGDHQ9H9P8 463 aa18.76■□□□□ 0.59
PBX3-204ENST00000373489 GNAT3A8MTJ3 354 aa18.75■□□□□ 0.59
PBX3-204ENST00000373489 H3BQV1 296 aa18.75■□□□□ 0.59
PBX3-204ENST00000373489 GLRX3O76003 335 aaKnown RBP18.75■□□□□ 0.59
PBX3-204ENST00000373489 IFFO2Q5TF58 517 aa18.75■□□□□ 0.59
PBX3-204ENST00000373489 UBXN4Q92575 508 aa18.75■□□□□ 0.59
PBX3-204ENST00000373489 BRF1Q92994 677 aa18.75■□□□□ 0.59
PBX3-204ENST00000373489 FAM193AP78312 1265 aa18.75■□□□□ 0.59
PBX3-204ENST00000373489 CREBRFQ8IUR6 639 aa18.75■□□□□ 0.59
PBX3-204ENST00000373489 C10orf67Q8IYJ2 551 aa18.75■□□□□ 0.59
PBX3-204ENST00000373489 NFATC2IPQ8NCF5 419 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms