RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 G2E3Q7L622 706 aa9.69□□□□□ -0.86
GARNL3-201ENST00000373386 C16orf71Q8IYS4 520 aaPredicted RBP9.69□□□□□ -0.86
GARNL3-201ENST00000373386 FAM184AQ8NB25 1140 aa9.69□□□□□ -0.86
GARNL3-201ENST00000373386 RHBDL3P58872 404 aa9.69□□□□□ -0.86
GARNL3-201ENST00000373386 IL17REQ8NFR9 667 aa9.69□□□□□ -0.86
GARNL3-201ENST00000373386 CEP126Q9P2H0 1117 aa9.69□□□□□ -0.86
GARNL3-201ENST00000373386 MX1P20591 662 aa9.69□□□□□ -0.86
GARNL3-201ENST00000373386 NAP1L1P55209 391 aaKnown RBP9.69□□□□□ -0.86
GARNL3-201ENST00000373386 MYRIPQ8NFW9 859 aa9.69□□□□□ -0.86
GARNL3-201ENST00000373386 OGFRQ9NZT2 677 aa9.69□□□□□ -0.86
GARNL3-201ENST00000373386 GOLGA6L6A8MZA4 724 aa9.68□□□□□ -0.86
GARNL3-201ENST00000373386 SLFN14P0C7P3 912 aa9.68□□□□□ -0.86
GARNL3-201ENST00000373386 CUL4AQ13619 759 aa9.68□□□□□ -0.86
GARNL3-201ENST00000373386 PDLIM2Q96JY6 352 aa9.68□□□□□ -0.86
GARNL3-201ENST00000373386 ESYT1Q9BSJ8 1104 aa9.68□□□□□ -0.86
GARNL3-201ENST00000373386 HEG1Q9ULI3 1381 aa9.68□□□□□ -0.86
GARNL3-201ENST00000373386 KCNA6P17658 529 aa9.68□□□□□ -0.86
GARNL3-201ENST00000373386 GORABQ5T7V8 394 aa9.68□□□□□ -0.86
GARNL3-201ENST00000373386 OTUD7AQ8TE49 926 aaPredicted RBP9.68□□□□□ -0.86
GARNL3-201ENST00000373386 RANBP17Q9H2T7 1088 aaKnown RBP9.68□□□□□ -0.86
GARNL3-201ENST00000373386 TOMM22Q9NS69 142 aa9.68□□□□□ -0.86
GARNL3-201ENST00000373386 NOL7Q9UMY1 257 aaKnown RBP9.68□□□□□ -0.86
GARNL3-201ENST00000373386 MTX1Q13505 466 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 AMOTQ4VCS5 1084 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 KCNV2Q8TDN2 545 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 TBC1D22AQ8WUA7 517 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 PES1O00541 588 aaKnown RBP9.67□□□□□ -0.86
GARNL3-201ENST00000373386 MBD3O95983 291 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 FKBP5Q13451 457 aaPredicted RBP9.67□□□□□ -0.86
GARNL3-201ENST00000373386 KLHL23Q8NBE8 558 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 USP44Q9H0E7 712 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 RBSNQ9H1K0 784 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 PHF8Q9UPP1 1060 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 CCP110O43303 1012 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 PRPF40AO75400 957 aaKnown RBP9.67□□□□□ -0.86
GARNL3-201ENST00000373386 ZRANB2O95218 330 aaKnown RBP eCLIP9.67□□□□□ -0.86
GARNL3-201ENST00000373386 MCM5P33992 734 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 ZSCAN26Q16670 478 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 AKAP4Q5JQC9 854 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 PDCL2Q8N4E4 241 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 ABTB2Q8N961 1025 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 TMX1Q9H3N1 280 aa9.67□□□□□ -0.86
GARNL3-201ENST00000373386 ERBB3P21860 1342 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 ATP6V1AP38606 617 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 PKP1Q13835 747 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 MAP9Q49MG5 647 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 LRSAM1Q6UWE0 723 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 ZGPATQ8N5A5 531 aaKnown RBP9.66□□□□□ -0.86
GARNL3-201ENST00000373386 GOLGA6L1Q8N7Z2 621 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 HELBQ8NG08 1087 aaPredicted RBP9.66□□□□□ -0.86
GARNL3-201ENST00000373386 SMARCA5O60264 1052 aaPredicted RBP9.66□□□□□ -0.86
GARNL3-201ENST00000373386 MARCH6O60337 910 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 SETSIPP0DME0 302 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 PAX3P23760 479 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 CHMLP26374 656 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 PRIM1P49642 420 aaKnown RBP9.66□□□□□ -0.86
GARNL3-201ENST00000373386 EIF4A1P60842 406 aaKnown RBP9.66□□□□□ -0.86
GARNL3-201ENST00000373386 HMGN5P82970 282 aaKnown RBP9.66□□□□□ -0.86
GARNL3-201ENST00000373386 NEXNQ0ZGT2 675 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 ZNF710Q8N1W2 664 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 GPT2Q8TD30 523 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 DEF6Q9H4E7 631 aa9.66□□□□□ -0.86
GARNL3-201ENST00000373386 F6X3S4 739 aa9.65□□□□□ -0.86
GARNL3-201ENST00000373386 UBTFL1P0CB47 393 aaPredicted RBP9.65□□□□□ -0.86
GARNL3-201ENST00000373386 CASQ1P31415 396 aa9.65□□□□□ -0.86
GARNL3-201ENST00000373386 GSCP56915 257 aaPredicted RBP9.65□□□□□ -0.86
GARNL3-201ENST00000373386 SLC4A10Q6U841 1118 aa9.65□□□□□ -0.86
GARNL3-201ENST00000373386 FAM212AQ96EL1 285 aa9.65□□□□□ -0.86
GARNL3-201ENST00000373386 MAF1Q9H063 256 aa9.65□□□□□ -0.86
GARNL3-201ENST00000373386 MIS18AQ9NYP9 233 aa9.65□□□□□ -0.86
GARNL3-201ENST00000373386 ZDHHC9Q9Y397 364 aa9.65□□□□□ -0.86
GARNL3-201ENST00000373386 RGPD2P0DJD1 1756 aa9.65□□□□□ -0.86
GARNL3-201ENST00000373386 TTC41PQ6P2S7 1318 aa9.65□□□□□ -0.86
GARNL3-201ENST00000373386 RAD51AP2Q09MP3 1159 aa9.65□□□□□ -0.86
GARNL3-201ENST00000373386 TMCO4Q5TGY1 634 aa9.65□□□□□ -0.86
GARNL3-201ENST00000373386 RBM27Q9P2N5 1060 aaKnown RBP9.65□□□□□ -0.86
GARNL3-201ENST00000373386 ALS2Q96Q42 1657 aa9.65□□□□□ -0.87
GARNL3-201ENST00000373386 PNMA6EA0A0J9YXQ4 647 aa9.65□□□□□ -0.87
GARNL3-201ENST00000373386 ANKRD33BA6NCL7 494 aa9.65□□□□□ -0.87
GARNL3-201ENST00000373386 JAKMIP3Q5VZ66 844 aa9.65□□□□□ -0.87
GARNL3-201ENST00000373386 NUTM2GQ5VZR2 741 aa9.65□□□□□ -0.87
GARNL3-201ENST00000373386 ANKLE2Q86XL3 938 aa9.65□□□□□ -0.87
GARNL3-201ENST00000373386 EVI5LQ96CN4 794 aa9.65□□□□□ -0.87
GARNL3-201ENST00000373386 PRIMPOLQ96LW4 560 aa9.65□□□□□ -0.87
GARNL3-201ENST00000373386 NUTM2FA1L443 756 aa9.64□□□□□ -0.87
GARNL3-201ENST00000373386 ALDH1L1O75891 902 aa9.64□□□□□ -0.87
GARNL3-201ENST00000373386 GTF2F1P35269 517 aaKnown RBP eCLIP9.64□□□□□ -0.87
GARNL3-201ENST00000373386 MFSD4BQ5TF39 518 aa9.64□□□□□ -0.87
GARNL3-201ENST00000373386 KIF1BPQ96EK5 621 aa9.64□□□□□ -0.87
GARNL3-201ENST00000373386 TEX13AQ9BXU3 409 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-201ENST00000373386 TMX4Q9H1E5 349 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-201ENST00000373386 CCDC39Q9UFE4 941 aa9.64□□□□□ -0.87
GARNL3-201ENST00000373386 ZKSCAN5Q9Y2L8 839 aa9.64□□□□□ -0.87
GARNL3-201ENST00000373386 MRC1P22897 1456 aa9.64□□□□□ -0.87
GARNL3-201ENST00000373386 ANKRD18BA2A2Z9 1011 aa9.64□□□□□ -0.87
GARNL3-201ENST00000373386 CAND2O75155 1236 aa9.64□□□□□ -0.87
GARNL3-201ENST00000373386 BEND3Q5T5X7 828 aa9.64□□□□□ -0.87
GARNL3-201ENST00000373386 JRKLQ9Y4A0 524 aa9.64□□□□□ -0.87
GARNL3-201ENST00000373386 PPME1Q9Y570 386 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms