RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 STX1AQ16623 288 aa12.63□□□□□ -0.39
CSMD2-204ENST00000373380 HSP90AA4PQ58FG1 418 aa12.63□□□□□ -0.39
CSMD2-204ENST00000373380 ODF2Q5BJF6 829 aa12.63□□□□□ -0.39
CSMD2-204ENST00000373380 CENPHQ9H3R5 247 aa12.63□□□□□ -0.39
CSMD2-204ENST00000373380 INO80Q9ULG1 1556 aaPredicted RBP12.63□□□□□ -0.39
CSMD2-204ENST00000373380 EYA1Q99502 592 aa12.62□□□□□ -0.39
CSMD2-204ENST00000373380 PRM3Q9NNZ6 103 aa12.62□□□□□ -0.39
CSMD2-204ENST00000373380 HMG20BQ9P0W2 317 aa12.62□□□□□ -0.39
CSMD2-204ENST00000373380 ZSCAN12O43309 604 aa12.62□□□□□ -0.39
CSMD2-204ENST00000373380 IARSP41252 1262 aaKnown RBP12.62□□□□□ -0.39
CSMD2-204ENST00000373380 LMBR1LQ6UX01 489 aa12.62□□□□□ -0.39
CSMD2-204ENST00000373380 IFNL2Q8IZJ0 200 aa12.62□□□□□ -0.39
CSMD2-204ENST00000373380 CCDC196A0A1B0GTZ2 297 aa12.62□□□□□ -0.39
CSMD2-204ENST00000373380 USP5P45974 858 aa12.62□□□□□ -0.39
CSMD2-204ENST00000373380 KRT28Q7Z3Y7 464 aa12.62□□□□□ -0.39
CSMD2-204ENST00000373380 KIAA1328Q86T90 577 aa12.62□□□□□ -0.39
CSMD2-204ENST00000373380 FAM200AQ8TCP9 573 aa12.62□□□□□ -0.39
CSMD2-204ENST00000373380 LRRC59Q96AG4 307 aaKnown RBP12.62□□□□□ -0.39
CSMD2-204ENST00000373380 DNAJC25Q9H1X3 360 aa12.62□□□□□ -0.39
CSMD2-204ENST00000373380 CEP131Q9UPN4 1083 aa12.62□□□□□ -0.39
CSMD2-204ENST00000373380 EIF3JO75822 258 aaKnown RBP12.62□□□□□ -0.39
CSMD2-204ENST00000373380 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
CSMD2-204ENST00000373380 POLR3GO15318 223 aaPredicted RBP12.61□□□□□ -0.39
CSMD2-204ENST00000373380 ABCA6Q8N139 1617 aa12.61□□□□□ -0.39
CSMD2-204ENST00000373380 KAT6BQ8WYB5 2073 aa12.61□□□□□ -0.39
CSMD2-204ENST00000373380 KLF18A0A0U1RQI7 1052 aa12.61□□□□□ -0.39
CSMD2-204ENST00000373380 NMIQ13287 307 aaPredicted RBP12.61□□□□□ -0.39
CSMD2-204ENST00000373380 KSR2Q6VAB6 950 aa12.61□□□□□ -0.39
CSMD2-204ENST00000373380 CWC25Q9NXE8 425 aaPredicted RBP12.61□□□□□ -0.39
CSMD2-204ENST00000373380 YTHDC2Q9H6S0 1430 aaKnown RBP12.61□□□□□ -0.39
CSMD2-204ENST00000373380 SNRPA1P09661 255 aaKnown RBP12.61□□□□□ -0.39
CSMD2-204ENST00000373380 LMTK2Q8IWU2 1503 aa12.61□□□□□ -0.39
CSMD2-204ENST00000373380 SYT1P21579 422 aa12.6□□□□□ -0.39
CSMD2-204ENST00000373380 Q6ZUG5 572 aa12.6□□□□□ -0.39
CSMD2-204ENST00000373380 CHST3Q7LGC8 479 aa12.6□□□□□ -0.39
CSMD2-204ENST00000373380 ZSWIM4Q9H7M6 989 aa12.6□□□□□ -0.39
CSMD2-204ENST00000373380 KIAA1210Q9ULL0 1709 aa12.6□□□□□ -0.39
CSMD2-204ENST00000373380 TMEM67Q5HYA8 995 aa12.6□□□□□ -0.39
CSMD2-204ENST00000373380 CTCFLQ8NI51 663 aaPredicted RBP12.6□□□□□ -0.39
CSMD2-204ENST00000373380 RBSNQ9H1K0 784 aa12.6□□□□□ -0.39
CSMD2-204ENST00000373380 ANKRD18BA2A2Z9 1011 aa12.6□□□□□ -0.39
CSMD2-204ENST00000373380 ZSCAN16Q9H4T2 348 aaPredicted RBP12.6□□□□□ -0.39
CSMD2-204ENST00000373380 LUC7LQ9NQ29 371 aaKnown RBP12.6□□□□□ -0.39
CSMD2-204ENST00000373380 NEMFO60524 1076 aa12.6□□□□□ -0.39
CSMD2-204ENST00000373380 BMP2KQ9NSY1 1161 aaPredicted RBP12.6□□□□□ -0.39
CSMD2-204ENST00000373380 SKILP12757 684 aa12.59□□□□□ -0.39
CSMD2-204ENST00000373380 SSRP1Q08945 709 aaKnown RBP12.59□□□□□ -0.39
CSMD2-204ENST00000373380 IQCA1Q86XH1 822 aa12.59□□□□□ -0.39
CSMD2-204ENST00000373380 IPO4Q8TEX9 1081 aaKnown RBP12.59□□□□□ -0.39
CSMD2-204ENST00000373380 PRIMPOLQ96LW4 560 aa12.59□□□□□ -0.39
CSMD2-204ENST00000373380 METAP2P50579 478 aaKnown RBP eCLIP12.59□□□□□ -0.39
CSMD2-204ENST00000373380 GSDMDP57764 484 aa12.59□□□□□ -0.39
CSMD2-204ENST00000373380 SNW1Q13573 536 aaKnown RBP12.59□□□□□ -0.39
CSMD2-204ENST00000373380 SLC26A6Q9BXS9 759 aa12.59□□□□□ -0.39
CSMD2-204ENST00000373380 MKNK2Q9HBH9 465 aa12.59□□□□□ -0.39
CSMD2-204ENST00000373380 SOS1Q07889 1333 aaPredicted RBP12.59□□□□□ -0.39
CSMD2-204ENST00000373380 KIF5CO60282 957 aa12.59□□□□□ -0.39
CSMD2-204ENST00000373380 FAM173BQ6P4H8 233 aa12.59□□□□□ -0.39
CSMD2-204ENST00000373380 LINS1Q8NG48 757 aa12.59□□□□□ -0.39
CSMD2-204ENST00000373380 NCOA7Q8NI08 942 aa12.59□□□□□ -0.39
CSMD2-204ENST00000373380 ZFYVE9O95405 1425 aa12.59□□□□□ -0.39
CSMD2-204ENST00000373380 MAP3K19Q56UN5 1328 aa12.59□□□□□ -0.39
CSMD2-204ENST00000373380 ALDH1L1O75891 902 aa12.58□□□□□ -0.39
CSMD2-204ENST00000373380 IBSPP21815 317 aaPredicted RBP12.58□□□□□ -0.39
CSMD2-204ENST00000373380 SETBP1Q9Y6X0 1596 aa12.58□□□□□ -0.39
CSMD2-204ENST00000373380 ADGRB3O60242 1522 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 HECW2Q9P2P5 1572 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 MARCKSP29966 332 aaPredicted RBP12.58□□□□□ -0.4
CSMD2-204ENST00000373380 CEP135Q66GS9 1140 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 CCDC102BQ68D86 513 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.58□□□□□ -0.4
CSMD2-204ENST00000373380 V9GYY5 206 aaPredicted RBP12.58□□□□□ -0.4
CSMD2-204ENST00000373380 TYRO3Q06418 890 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 CAVIN4Q5BKX8 364 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 ZSCAN29Q8IWY8 852 aaPredicted RBP12.58□□□□□ -0.4
CSMD2-204ENST00000373380 KLHL34Q8N239 644 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 ABCC3O15438 1527 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 MSH6P52701 1360 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 CAVIN2O95810 425 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 CASQ1P31415 396 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 DNA2P51530 1060 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 ENOX2Q16206 610 aaKnown RBP12.58□□□□□ -0.4
CSMD2-204ENST00000373380 MCMDC2Q4G0Z9 681 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 CREB3L3Q68CJ9 461 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 GPATCH11Q8N954 259 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 INTS4Q96HW7 963 aaKnown RBP12.58□□□□□ -0.4
CSMD2-204ENST00000373380 CALCOCO1Q9P1Z2 691 aa12.58□□□□□ -0.4
CSMD2-204ENST00000373380 NEURL4Q96JN8 1562 aa12.57□□□□□ -0.4
CSMD2-204ENST00000373380 KIAA0754O94854 1291 aa12.57□□□□□ -0.4
CSMD2-204ENST00000373380 SYKP43405 635 aa12.57□□□□□ -0.4
CSMD2-204ENST00000373380 SYCP1Q15431 976 aa12.57□□□□□ -0.4
CSMD2-204ENST00000373380 TTC21AQ8NDW8 1320 aa12.57□□□□□ -0.4
CSMD2-204ENST00000373380 SLC5A1P13866 664 aa12.57□□□□□ -0.4
CSMD2-204ENST00000373380 IL13P35225 146 aa12.57□□□□□ -0.4
CSMD2-204ENST00000373380 RBM5P52756 815 aaKnown RBP eCLIP12.57□□□□□ -0.4
CSMD2-204ENST00000373380 GNG11P61952 73 aa12.57□□□□□ -0.4
CSMD2-204ENST00000373380 NUP88Q99567 741 aaPredicted RBP12.57□□□□□ -0.4
CSMD2-204ENST00000373380 VWDEQ8N2E2 1590 aa12.57□□□□□ -0.4
CSMD2-204ENST00000373380 LMOD1P29536 600 aaPredicted RBP12.56□□□□□ -0.4
CSMD2-204ENST00000373380 NLRP5P59047 1200 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms