RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 HIP1O00291 1037 aa28.53■■■□□ 2.16
CDK9-201ENST00000373264 F13A1P00488 732 aa28.53■■■□□ 2.16
CDK9-201ENST00000373264 FIBPO43427 364 aa28.53■■■□□ 2.16
CDK9-201ENST00000373264 ATP5JP18859 108 aa28.53■■■□□ 2.16
CDK9-201ENST00000373264 ZNF594Q96JF6 807 aaPredicted RBP28.53■■■□□ 2.16
CDK9-201ENST00000373264 SNRKQ9NRH2 765 aa28.53■■■□□ 2.16
CDK9-201ENST00000373264 ABCC6O95255 1503 aa28.53■■■□□ 2.16
CDK9-201ENST00000373264 TAF5LO75529 589 aa28.52■■■□□ 2.16
CDK9-201ENST00000373264 MTMR6Q9Y217 621 aa28.52■■■□□ 2.16
CDK9-201ENST00000373264 ANP32BQ92688 251 aaKnown RBP28.51■■■□□ 2.16
CDK9-201ENST00000373264 ZNF330Q9Y3S2 320 aaPredicted RBP28.51■■■□□ 2.15
CDK9-201ENST00000373264 PCDH11XQ9BZA7 1347 aa28.51■■■□□ 2.15
CDK9-201ENST00000373264 PCDH11YQ9BZA8 1340 aa28.51■■■□□ 2.15
CDK9-201ENST00000373264 ZNF609O15014 1411 aa28.5■■■□□ 2.15
CDK9-201ENST00000373264 TIMM10P62072 90 aa28.5■■■□□ 2.15
CDK9-201ENST00000373264 DNM1Q05193 864 aaKnown RBP28.5■■■□□ 2.15
CDK9-201ENST00000373264 VPS37CA5D8V6 355 aaPredicted RBP28.5■■■□□ 2.15
CDK9-201ENST00000373264 H7C1W4 665 aa28.5■■■□□ 2.15
CDK9-201ENST00000373264 STK3Q13188 491 aa28.5■■■□□ 2.15
CDK9-201ENST00000373264 ATG9AQ7Z3C6 839 aa28.49■■■□□ 2.15
CDK9-201ENST00000373264 NEUROD6Q96NK8 337 aa28.49■■■□□ 2.15
CDK9-201ENST00000373264 TOB2Q14106 344 aaPredicted RBP28.49■■■□□ 2.15
CDK9-201ENST00000373264 LRRC24Q50LG9 513 aa28.48■■■□□ 2.15
CDK9-201ENST00000373264 FAM173BQ6P4H8 233 aa28.48■■■□□ 2.15
CDK9-201ENST00000373264 LAMB4A4D0S4 1761 aa28.48■■■□□ 2.15
CDK9-201ENST00000373264 BLOC1S2Q6QNY1 142 aa28.48■■■□□ 2.15
CDK9-201ENST00000373264 COL5A2P05997 1499 aaPredicted RBP28.48■■■□□ 2.15
CDK9-201ENST00000373264 FERMT3Q86UX7 667 aa28.47■■■□□ 2.15
CDK9-201ENST00000373264 ZSCAN31Q96LW9 406 aaPredicted RBP28.47■■■□□ 2.15
CDK9-201ENST00000373264 SH2B1Q9NRF2 756 aaPredicted RBP28.47■■■□□ 2.15
CDK9-201ENST00000373264 RPS6KB1P23443 525 aa28.46■■■□□ 2.15
CDK9-201ENST00000373264 CWC25Q9NXE8 425 aaPredicted RBP28.46■■■□□ 2.15
CDK9-201ENST00000373264 KCPQ6ZWJ8 1503 aa28.46■■■□□ 2.15
CDK9-201ENST00000373264 CCDC85AQ96PX6 553 aaPredicted RBP28.46■■■□□ 2.15
CDK9-201ENST00000373264 PUS3Q9BZE2 481 aaKnown RBP28.46■■■□□ 2.15
CDK9-201ENST00000373264 SLAIN2Q9P270 581 aa28.46■■■□□ 2.15
CDK9-201ENST00000373264 IL2RBP14784 551 aa28.45■■■□□ 2.15
CDK9-201ENST00000373264 ZNF335Q9H4Z2 1342 aaPredicted RBP28.45■■■□□ 2.14
CDK9-201ENST00000373264 TMEM87AQ8NBN3 555 aa28.45■■■□□ 2.14
CDK9-201ENST00000373264 HAUS7Q99871 368 aa28.45■■■□□ 2.14
CDK9-201ENST00000373264 CDC37L1Q7L3B6 337 aa28.44■■■□□ 2.14
CDK9-201ENST00000373264 PDLIM2Q96JY6 352 aa28.44■■■□□ 2.14
CDK9-201ENST00000373264 JCADQ9P266 1359 aa28.44■■■□□ 2.14
CDK9-201ENST00000373264 A0A0G2JLW4 131 aa28.44■■■□□ 2.14
CDK9-201ENST00000373264 GOLIM4O00461 696 aa28.44■■■□□ 2.14
CDK9-201ENST00000373264 PSMA5P28066 241 aa28.44■■■□□ 2.14
CDK9-201ENST00000373264 LRRC2Q9BYS8 371 aa28.44■■■□□ 2.14
CDK9-201ENST00000373264 TSPY26PQ9H489 355 aa28.44■■■□□ 2.14
CDK9-201ENST00000373264 PARP4Q9UKK3 1724 aaKnown RBP28.44■■■□□ 2.14
CDK9-201ENST00000373264 ERVV-2B6SEH9 535 aa28.43■■■□□ 2.14
CDK9-201ENST00000373264 RNF20Q5VTR2 975 aa28.43■■■□□ 2.14
CDK9-201ENST00000373264 NAP1L5Q96NT1 182 aaPredicted RBP28.43■■■□□ 2.14
CDK9-201ENST00000373264 TJP1Q07157 1748 aa28.42■■■□□ 2.14
CDK9-201ENST00000373264 SOS2Q07890 1332 aaPredicted RBP28.42■■■□□ 2.14
CDK9-201ENST00000373264 LARP1BQ659C4 914 aaKnown RBP28.42■■■□□ 2.14
CDK9-201ENST00000373264 NUP188Q5SRE5 1749 aa28.41■■■□□ 2.14
CDK9-201ENST00000373264 CYP21A2P08686 494 aa28.41■■■□□ 2.14
CDK9-201ENST00000373264 UBR2Q8IWV8 1755 aa28.41■■■□□ 2.14
CDK9-201ENST00000373264 USPL1Q5W0Q7 1092 aa28.41■■■□□ 2.14
CDK9-201ENST00000373264 SYAP1Q96A49 352 aaPredicted RBP28.4■■■□□ 2.14
CDK9-201ENST00000373264 EVA1CP58658 441 aa28.39■■■□□ 2.14
CDK9-201ENST00000373264 NKX1-1Q15270 411 aaPredicted RBP28.39■■■□□ 2.14
CDK9-201ENST00000373264 ZSCAN30Q86W11 494 aa28.39■■■□□ 2.14
CDK9-201ENST00000373264 ASAP1Q9ULH1 1129 aa28.39■■■□□ 2.14
CDK9-201ENST00000373264 SHANK3Q9BYB0 1731 aa28.39■■■□□ 2.13
CDK9-201ENST00000373264 JAK2O60674 1132 aa28.38■■■□□ 2.13
CDK9-201ENST00000373264 MCMDC2Q4G0Z9 681 aa28.38■■■□□ 2.13
CDK9-201ENST00000373264 STOX1Q6ZVD7 989 aa28.38■■■□□ 2.13
CDK9-201ENST00000373264 CARD10Q9BWT7 1032 aa28.38■■■□□ 2.13
CDK9-201ENST00000373264 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.38■■■□□ 2.13
CDK9-201ENST00000373264 UBE2HP62256 183 aa28.38■■■□□ 2.13
CDK9-201ENST00000373264 SYNE4Q8N205 404 aa28.38■■■□□ 2.13
CDK9-201ENST00000373264 KBTBD3Q8NAB2 608 aa28.37■■■□□ 2.13
CDK9-201ENST00000373264 PLEKHG2Q9H7P9 1386 aa28.37■■■□□ 2.13
CDK9-201ENST00000373264 MPNDQ8N594 471 aa28.37■■■□□ 2.13
CDK9-201ENST00000373264 NEK1Q96PY6 1258 aa28.36■■■□□ 2.13
CDK9-201ENST00000373264 PAG1Q9NWQ8 432 aa28.36■■■□□ 2.13
CDK9-201ENST00000373264 TSGA10IPQ3SY00 556 aa28.36■■■□□ 2.13
CDK9-201ENST00000373264 HMG20BQ9P0W2 317 aa28.36■■■□□ 2.13
CDK9-201ENST00000373264 CCDC183Q5T5S1 534 aa28.35■■■□□ 2.13
CDK9-201ENST00000373264 Q6ZUG5 572 aa28.35■■■□□ 2.13
CDK9-201ENST00000373264 CCDC191Q8NCU4 936 aa28.35■■■□□ 2.13
CDK9-201ENST00000373264 A0A1B0GUL7 405 aa28.35■■■□□ 2.13
CDK9-201ENST00000373264 EYA2O00167 538 aa28.35■■■□□ 2.13
CDK9-201ENST00000373264 GIMAP6Q6P9H5 292 aa28.35■■■□□ 2.13
CDK9-201ENST00000373264 DNAJC10Q8IXB1 793 aa28.35■■■□□ 2.13
CDK9-201ENST00000373264 FAM89AQ96GI7 184 aa28.35■■■□□ 2.13
CDK9-201ENST00000373264 ATP6V1DQ9Y5K8 247 aa28.34■■■□□ 2.13
CDK9-201ENST00000373264 TOGARAM1Q9Y4F4 1720 aa28.34■■■□□ 2.13
CDK9-201ENST00000373264 PPFIA3O75145 1194 aa28.34■■■□□ 2.13
CDK9-201ENST00000373264 TTC6Q86TZ1 520 aa28.34■■■□□ 2.13
CDK9-201ENST00000373264 HCLS1P14317 486 aaPredicted RBP28.33■■■□□ 2.13
CDK9-201ENST00000373264 ADORA1P30542 326 aa28.33■■■□□ 2.13
CDK9-201ENST00000373264 IL15P40933 162 aaPredicted RBP28.33■■■□□ 2.13
CDK9-201ENST00000373264 TMOD3Q9NYL9 352 aa28.33■■■□□ 2.13
CDK9-201ENST00000373264 TFIP11Q9UBB9 837 aaKnown RBP28.33■■■□□ 2.13
CDK9-201ENST00000373264 PIGBQ92521 554 aa28.32■■■□□ 2.12
CDK9-201ENST00000373264 PAPPAQ13219 1627 aa28.32■■■□□ 2.12
CDK9-201ENST00000373264 KAT6BQ8WYB5 2073 aa28.32■■■□□ 2.12
CDK9-201ENST00000373264 TNS2Q63HR2 1409 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms